Streptococcus phage Javan345

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 44 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D6A8B3|A0A4D6A8B3_9CAUD Cell wall-associated murein hydrolase OS=Streptococcus phage Javan345 OX=2548115 GN=Javan345_0044 PE=4 SV=1
MM1 pKa = 6.98NQNNDD6 pKa = 3.15FAEE9 pKa = 4.14VLLEE13 pKa = 4.06YY14 pKa = 10.53IKK16 pKa = 10.76GIQDD20 pKa = 4.6KK21 pKa = 10.51IPSKK25 pKa = 10.52HH26 pKa = 6.11GYY28 pKa = 8.93LAEE31 pKa = 4.35KK32 pKa = 9.79EE33 pKa = 4.3GLVVFPLAGGEE44 pKa = 4.31VVDD47 pKa = 4.74EE48 pKa = 4.72DD49 pKa = 3.69MAGIQTVSLPFEE61 pKa = 3.99IAIKK65 pKa = 10.84SRR67 pKa = 11.84DD68 pKa = 3.43QEE70 pKa = 4.56LNNNTLWQINAALSKK85 pKa = 10.22MGLEE89 pKa = 4.39LPSKK93 pKa = 9.38NGSYY97 pKa = 10.54EE98 pKa = 3.95FLGLKK103 pKa = 9.26VDD105 pKa = 4.17KK106 pKa = 10.45PYY108 pKa = 11.37LNDD111 pKa = 3.67LDD113 pKa = 4.0EE114 pKa = 4.51QGFYY118 pKa = 10.26IYY120 pKa = 10.75LLDD123 pKa = 3.55VTASLEE129 pKa = 4.04IEE131 pKa = 4.16RR132 pKa = 11.84NEE134 pKa = 3.88

Molecular weight: 15.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D6ACF3|A0A4D6ACF3_9CAUD Uncharacterized protein OS=Streptococcus phage Javan345 OX=2548115 GN=Javan345_0042 PE=4 SV=1
MM1 pKa = 7.42GGVNVKK7 pKa = 9.78IDD9 pKa = 3.38LSGIEE14 pKa = 4.44KK15 pKa = 10.3KK16 pKa = 10.84VSPEE20 pKa = 3.5NLAKK24 pKa = 10.67GKK26 pKa = 9.96LAIANQMLMDD36 pKa = 4.12MEE38 pKa = 4.55RR39 pKa = 11.84FVPKK43 pKa = 10.34RR44 pKa = 11.84KK45 pKa = 10.22GEE47 pKa = 4.0LRR49 pKa = 11.84SSGHH53 pKa = 5.14VRR55 pKa = 11.84QDD57 pKa = 3.5SIVYY61 pKa = 6.47ATPYY65 pKa = 10.94ARR67 pKa = 11.84LLYY70 pKa = 10.06YY71 pKa = 10.27GKK73 pKa = 9.95KK74 pKa = 9.48RR75 pKa = 11.84KK76 pKa = 9.93GFFSEE81 pKa = 3.79KK82 pKa = 8.59QRR84 pKa = 11.84RR85 pKa = 11.84FFFANKK91 pKa = 9.4EE92 pKa = 4.04KK93 pKa = 10.74LLSQRR98 pKa = 11.84PTPGTGPRR106 pKa = 11.84WDD108 pKa = 3.54KK109 pKa = 10.92KK110 pKa = 10.61AAALHH115 pKa = 5.36SKK117 pKa = 9.74KK118 pKa = 9.92WGDD121 pKa = 3.49VGLKK125 pKa = 10.86AMGLKK130 pKa = 10.15

Molecular weight: 14.71 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

44

0

44

10764

43

1214

244.6

27.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.395 ± 0.996

0.641 ± 0.116

6.262 ± 0.34

7.646 ± 0.586

4.218 ± 0.237

6.475 ± 0.44

1.329 ± 0.207

6.531 ± 0.318

8.417 ± 0.604

7.925 ± 0.278

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.369 ± 0.251

5.323 ± 0.411

2.573 ± 0.171

4.469 ± 0.244

3.995 ± 0.336

6.819 ± 0.514

5.946 ± 0.424

6.615 ± 0.331

1.301 ± 0.209

3.753 ± 0.395
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski