Modestobacter muralis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Geodermatophilales; Geodermatophilaceae; Modestobacter

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4084 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6P0H6E2|A0A6P0H6E2_9ACTN Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase OS=Modestobacter muralis OX=1608614 GN=lgt PE=3 SV=1
MM1 pKa = 7.51SSANRR6 pKa = 11.84TGLTALALAAGLLLAGCGGDD26 pKa = 4.39ADD28 pKa = 5.3ADD30 pKa = 3.82TAAASGGHH38 pKa = 5.45DD39 pKa = 3.73HH40 pKa = 7.17GGAAAPATVAGGEE53 pKa = 4.0DD54 pKa = 3.45SPYY57 pKa = 10.93SGLYY61 pKa = 9.82LQDD64 pKa = 4.64PYY66 pKa = 11.44QKK68 pKa = 10.74PEE70 pKa = 3.67FTLTDD75 pKa = 3.51GAGAPFDD82 pKa = 3.8FAEE85 pKa = 4.43RR86 pKa = 11.84TAAGPTLLFFGYY98 pKa = 7.92TNCPDD103 pKa = 3.37VCPTTMADD111 pKa = 2.95VALALRR117 pKa = 11.84TTDD120 pKa = 3.72PAVVAATNVVFVTTDD135 pKa = 3.51PARR138 pKa = 11.84DD139 pKa = 3.57TPEE142 pKa = 3.88VLDD145 pKa = 4.45EE146 pKa = 3.91YY147 pKa = 11.05LGRR150 pKa = 11.84FDD152 pKa = 5.93ADD154 pKa = 3.35LGTSFVGLTGDD165 pKa = 3.37QAQIEE170 pKa = 4.46QAQLAAGVPLAEE182 pKa = 5.5DD183 pKa = 3.19NGEE186 pKa = 4.13THH188 pKa = 7.02SAMLLLYY195 pKa = 8.97GTDD198 pKa = 3.6GEE200 pKa = 4.75ADD202 pKa = 3.5VAFNGGNTATDD213 pKa = 3.43IAHH216 pKa = 7.15DD217 pKa = 4.08LAVVAAEE224 pKa = 3.98

Molecular weight: 22.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6P0EQD6|A0A6P0EQD6_9ACTN Histidine kinase OS=Modestobacter muralis OX=1608614 GN=G3R41_03915 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.99KK16 pKa = 9.77HH17 pKa = 5.81RR18 pKa = 11.84KK19 pKa = 8.51LLKK22 pKa = 8.15KK23 pKa = 9.25TRR25 pKa = 11.84VQRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.81KK32 pKa = 9.63

Molecular weight: 4.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4084

0

4084

1277771

26

2326

312.9

33.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.608 ± 0.058

0.632 ± 0.011

6.198 ± 0.033

5.215 ± 0.036

2.523 ± 0.023

9.668 ± 0.041

2.009 ± 0.018

2.683 ± 0.031

1.339 ± 0.024

10.722 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.577 ± 0.017

1.447 ± 0.019

6.139 ± 0.038

2.891 ± 0.021

7.792 ± 0.046

5.019 ± 0.024

6.348 ± 0.029

10.014 ± 0.038

1.479 ± 0.018

1.696 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski