Penguinpox virus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus

Average proteome isoelectric point is 6.89

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 240 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A068ELR0|A0A068ELR0_9POXV DNA helicase OS=Penguinpox virus OX=648998 GN=pepv_196 PE=4 SV=1
MM1 pKa = 7.38QYY3 pKa = 9.66TRR5 pKa = 11.84IIMIYY10 pKa = 9.77IITSLLFIKK19 pKa = 9.3VTTGITEE26 pKa = 4.24PVKK29 pKa = 10.44NPQDD33 pKa = 3.17ILHH36 pKa = 6.3IMEE39 pKa = 4.68HH40 pKa = 6.13NKK42 pKa = 9.63TGVTACSLYY51 pKa = 11.04CFDD54 pKa = 4.41QSKK57 pKa = 10.58GLDD60 pKa = 3.39QPKK63 pKa = 8.87TFILPGKK70 pKa = 9.66YY71 pKa = 9.99SNNSIKK77 pKa = 10.84LEE79 pKa = 3.9IAIDD83 pKa = 3.65IYY85 pKa = 11.5KK86 pKa = 10.12KK87 pKa = 10.36DD88 pKa = 3.62SKK90 pKa = 10.72PDD92 pKa = 3.47YY93 pKa = 10.52SHH95 pKa = 7.76PCQAFQFCVSGNFSGKK111 pKa = 10.17RR112 pKa = 11.84FDD114 pKa = 3.75HH115 pKa = 6.1YY116 pKa = 11.25LYY118 pKa = 10.52GYY120 pKa = 7.99TITGFIDD127 pKa = 3.19IASSYY132 pKa = 9.19YY133 pKa = 10.61SGMSISTITLMPLQEE148 pKa = 4.61GSLNPDD154 pKa = 3.25SEE156 pKa = 5.15DD157 pKa = 4.43EE158 pKa = 4.33EE159 pKa = 6.24DD160 pKa = 4.12CTTPPISTITQSQRR174 pKa = 11.84IPEE177 pKa = 4.04PVIKK181 pKa = 10.04EE182 pKa = 3.72GCRR185 pKa = 11.84PVVLQRR191 pKa = 11.84YY192 pKa = 9.17AEE194 pKa = 4.38SDD196 pKa = 3.75DD197 pKa = 4.11PTCIMYY203 pKa = 9.41WDD205 pKa = 4.17HH206 pKa = 6.67TWDD209 pKa = 3.55NYY211 pKa = 10.85CDD213 pKa = 3.29VGFFNSQQRR222 pKa = 11.84DD223 pKa = 3.31HH224 pKa = 7.54DD225 pKa = 4.28PLVFPLKK232 pKa = 10.32SYY234 pKa = 10.87LGIRR238 pKa = 11.84GAFQDD243 pKa = 3.92FQSYY247 pKa = 8.5YY248 pKa = 10.68CKK250 pKa = 10.68SLDD253 pKa = 3.71LNQSYY258 pKa = 9.43SVCISIGEE266 pKa = 4.15TPIAVTYY273 pKa = 10.26HH274 pKa = 6.11SYY276 pKa = 11.73EE277 pKa = 4.28NITVNEE283 pKa = 4.11LLTRR287 pKa = 11.84IMTLYY292 pKa = 10.96GEE294 pKa = 4.58EE295 pKa = 4.21NVHH298 pKa = 6.3KK299 pKa = 10.57LPYY302 pKa = 10.14RR303 pKa = 11.84NITIMAHH310 pKa = 5.56AQIQSLPLINGTCDD324 pKa = 3.3TDD326 pKa = 3.88GSNDD330 pKa = 3.89DD331 pKa = 4.61SDD333 pKa = 5.77SGDD336 pKa = 5.18DD337 pKa = 5.89DD338 pKa = 6.88DD339 pKa = 7.74DD340 pKa = 7.12DD341 pKa = 6.72DD342 pKa = 6.75DD343 pKa = 6.4YY344 pKa = 12.06YY345 pKa = 11.56DD346 pKa = 4.8EE347 pKa = 4.85YY348 pKa = 11.75DD349 pKa = 4.31LYY351 pKa = 10.77IEE353 pKa = 4.29STPSIVTVKK362 pKa = 10.2PKK364 pKa = 9.65KK365 pKa = 9.08TVTDD369 pKa = 4.08EE370 pKa = 4.06YY371 pKa = 11.72NSIFNSFDD379 pKa = 3.22NFDD382 pKa = 3.66LEE384 pKa = 4.61KK385 pKa = 10.78RR386 pKa = 3.75

Molecular weight: 44.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A068EHK9|A0A068EHK9_9POXV Telomere-binding protein I1 OS=Penguinpox virus OX=648998 GN=pepv_093 PE=3 SV=1
MM1 pKa = 7.54EE2 pKa = 5.37IARR5 pKa = 11.84EE6 pKa = 3.92TLITIGLTILVVVLVITGFSLVLRR30 pKa = 11.84LIPGVYY36 pKa = 9.71SAASRR41 pKa = 11.84SSFTAGKK48 pKa = 9.17VLRR51 pKa = 11.84FMEE54 pKa = 4.3IFSTVMFIPGIIILYY69 pKa = 9.17AAYY72 pKa = 9.46IRR74 pKa = 11.84KK75 pKa = 7.84TKK77 pKa = 9.57MKK79 pKa = 10.73NNN81 pKa = 3.69

Molecular weight: 8.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

240

0

240

80106

34

1922

333.8

38.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.423 ± 0.104

2.177 ± 0.087

6.33 ± 0.114

5.68 ± 0.09

4.197 ± 0.109

3.902 ± 0.107

2.016 ± 0.043

10.281 ± 0.175

8.359 ± 0.151

9.2 ± 0.194

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.552 ± 0.06

7.473 ± 0.16

3.081 ± 0.106

1.909 ± 0.059

3.967 ± 0.1

7.758 ± 0.201

5.634 ± 0.116

5.661 ± 0.092

0.643 ± 0.043

5.756 ± 0.089
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski