Boseongicola aestuarii

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Boseongicola

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4011 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A238J391|A0A238J391_9RHOB Uncharacterized protein OS=Boseongicola aestuarii OX=1470561 GN=BOA8489_02554 PE=4 SV=1
MM1 pKa = 8.29RR2 pKa = 11.84YY3 pKa = 9.25PILAAGLLAVTPASAQDD20 pKa = 3.81LPVLTVYY27 pKa = 10.19TYY29 pKa = 11.52DD30 pKa = 4.19SFVADD35 pKa = 4.6WGPGPAIEE43 pKa = 4.32TAFEE47 pKa = 4.16ATCEE51 pKa = 4.08CDD53 pKa = 3.53LQFIAAGDD61 pKa = 3.85GAALLGRR68 pKa = 11.84VRR70 pKa = 11.84LEE72 pKa = 4.16GARR75 pKa = 11.84SDD77 pKa = 3.53ADD79 pKa = 3.13IVLGLDD85 pKa = 3.5TNLLAAANDD94 pKa = 3.76TGLFAPHH101 pKa = 6.59GLEE104 pKa = 4.42TPALDD109 pKa = 5.8LPVDD113 pKa = 3.4WSDD116 pKa = 3.68ATFLPYY122 pKa = 10.58DD123 pKa = 3.11WGYY126 pKa = 10.28FAFVHH131 pKa = 5.63NAGMEE136 pKa = 4.35NIPTDD141 pKa = 3.9FRR143 pKa = 11.84GLGASDD149 pKa = 3.56TTIVIQDD156 pKa = 3.99PRR158 pKa = 11.84SSTPGLGLLMWVKK171 pKa = 10.34AAYY174 pKa = 10.0GDD176 pKa = 3.85EE177 pKa = 4.8APGIWEE183 pKa = 3.99ALADD187 pKa = 3.76NVVTVTPGWSEE198 pKa = 4.06AYY200 pKa = 10.34GLFLEE205 pKa = 5.7GEE207 pKa = 4.19ADD209 pKa = 3.43MVLSYY214 pKa = 7.66TTSPAYY220 pKa = 10.24HH221 pKa = 7.25LIAEE225 pKa = 4.41EE226 pKa = 4.25DD227 pKa = 3.55TGKK230 pKa = 8.28TAAAFAEE237 pKa = 4.19GHH239 pKa = 5.25YY240 pKa = 10.42LQVEE244 pKa = 4.63VAGKK248 pKa = 9.47LASSDD253 pKa = 3.72QPEE256 pKa = 4.5LATAFLDD263 pKa = 5.2FMLTDD268 pKa = 4.59AFQSVIPTTNWMYY281 pKa = 9.93PAVMPEE287 pKa = 3.73GGLPEE292 pKa = 4.47GFEE295 pKa = 4.3TLIQPDD301 pKa = 3.66QALLLSPVAAAEE313 pKa = 4.2ARR315 pKa = 11.84DD316 pKa = 3.63EE317 pKa = 5.92ALDD320 pKa = 3.51EE321 pKa = 4.2WLTALSRR328 pKa = 3.8

Molecular weight: 34.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A238J4E7|A0A238J4E7_9RHOB Tyrosine recombinase XerC OS=Boseongicola aestuarii OX=1470561 GN=xerC_3 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLVRR12 pKa = 11.84KK13 pKa = 9.18RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.42GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.37AGRR28 pKa = 11.84KK29 pKa = 8.81IINARR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 9.18SLTAA44 pKa = 4.14

Molecular weight: 5.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4011

0

4011

1184372

29

2802

295.3

32.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.795 ± 0.045

0.886 ± 0.013

6.093 ± 0.04

5.961 ± 0.036

3.995 ± 0.031

8.49 ± 0.036

1.999 ± 0.02

5.566 ± 0.031

3.364 ± 0.032

9.842 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.76 ± 0.02

2.79 ± 0.02

4.865 ± 0.025

2.939 ± 0.019

6.418 ± 0.037

5.532 ± 0.029

5.595 ± 0.027

7.469 ± 0.032

1.418 ± 0.018

2.222 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski