Streptococcus satellite phage Javan402

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 21 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZMP4|A0A4D5ZMP4_9VIRU Integrase OS=Streptococcus satellite phage Javan402 OX=2558681 GN=JavanS402_0001 PE=3 SV=1
MM1 pKa = 7.2KK2 pKa = 9.64TLSDD6 pKa = 3.59TPKK9 pKa = 9.76TFTFTTTLPNFEE21 pKa = 4.31QAQKK25 pKa = 10.83AGSALIGYY33 pKa = 7.54MVGTYY38 pKa = 9.42DD39 pKa = 4.57QSAIDD44 pKa = 3.19ITYY47 pKa = 9.93IGNGDD52 pKa = 3.54IEE54 pKa = 4.52VEE56 pKa = 4.29YY57 pKa = 10.52TSDD60 pKa = 3.79EE61 pKa = 4.26DD62 pKa = 3.41LTEE65 pKa = 4.05NFEE68 pKa = 4.83RR69 pKa = 11.84IANSLDD75 pKa = 3.33HH76 pKa = 7.05TDD78 pKa = 4.04DD79 pKa = 4.3FEE81 pKa = 7.25DD82 pKa = 4.38YY83 pKa = 11.27EE84 pKa = 4.49EE85 pKa = 5.88DD86 pKa = 3.84EE87 pKa = 4.46PTLKK91 pKa = 10.85GDD93 pKa = 3.89LDD95 pKa = 4.15TYY97 pKa = 9.8TALIGSFDD105 pKa = 3.91TLGQAQAFTEE115 pKa = 4.03NLDD118 pKa = 4.42DD119 pKa = 5.64NLTNGNNFVFEE130 pKa = 4.15QRR132 pKa = 11.84PDD134 pKa = 3.44TVVVYY139 pKa = 8.67VSPQYY144 pKa = 10.65TIANSTIQKK153 pKa = 10.38LEE155 pKa = 3.57EE156 pKa = 4.35AYY158 pKa = 11.02VKK160 pKa = 10.6FEE162 pKa = 4.6ADD164 pKa = 3.59YY165 pKa = 11.33EE166 pKa = 4.41PDD168 pKa = 3.43TFRR171 pKa = 11.84LSYY174 pKa = 10.96HH175 pKa = 6.43DD176 pKa = 4.11MRR178 pKa = 11.84VQQLQSLDD186 pKa = 3.52KK187 pKa = 10.91DD188 pKa = 3.39ILINDD193 pKa = 4.29IIAYY197 pKa = 9.12EE198 pKa = 4.44LEE200 pKa = 4.52LLDD203 pKa = 4.44HH204 pKa = 7.54ADD206 pKa = 3.89RR207 pKa = 11.84LLSDD211 pKa = 4.22EE212 pKa = 5.14PLPLDD217 pKa = 4.17DD218 pKa = 3.37QHH220 pKa = 8.21GFEE223 pKa = 4.67TIEE226 pKa = 4.04LLGDD230 pKa = 3.74DD231 pKa = 4.17VIKK234 pKa = 10.57LVKK237 pKa = 10.4EE238 pKa = 3.67LDD240 pKa = 3.71TNKK243 pKa = 10.24EE244 pKa = 3.38LDD246 pKa = 4.4GIHH249 pKa = 7.43DD250 pKa = 4.37YY251 pKa = 11.02IIGGG255 pKa = 3.65

Molecular weight: 28.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZMQ5|A0A4D5ZMQ5_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan402 OX=2558681 GN=JavanS402_0011 PE=4 SV=1
MM1 pKa = 7.92KK2 pKa = 9.25ITEE5 pKa = 4.2YY6 pKa = 10.55KK7 pKa = 10.52KK8 pKa = 10.31KK9 pKa = 10.41DD10 pKa = 3.25GTIMYY15 pKa = 9.49RR16 pKa = 11.84SQIYY20 pKa = 10.55LGVDD24 pKa = 2.94SVTGKK29 pKa = 10.43KK30 pKa = 10.34ARR32 pKa = 11.84TSVSGRR38 pKa = 11.84TKK40 pKa = 10.78KK41 pKa = 9.89EE42 pKa = 3.5LKK44 pKa = 10.87NNIKK48 pKa = 9.59LAKK51 pKa = 10.46YY52 pKa = 8.03EE53 pKa = 4.07FQANGEE59 pKa = 4.46TVSKK63 pKa = 10.21KK64 pKa = 9.68VQVKK68 pKa = 8.92TYY70 pKa = 9.61SQLVEE75 pKa = 4.2LWLEE79 pKa = 4.11NYY81 pKa = 10.23KK82 pKa = 9.32LTIKK86 pKa = 9.75PQTYY90 pKa = 9.3RR91 pKa = 11.84VTTRR95 pKa = 11.84LIDD98 pKa = 3.71CHH100 pKa = 6.68LLPYY104 pKa = 9.22FGKK107 pKa = 9.76MKK109 pKa = 10.46VEE111 pKa = 4.78KK112 pKa = 10.36ISNTDD117 pKa = 2.49IQSFVNGLSSKK128 pKa = 10.17LVNFRR133 pKa = 11.84TVNSINTRR141 pKa = 11.84VLQYY145 pKa = 10.84GVSLNLIPFNPARR158 pKa = 11.84DD159 pKa = 3.53VILPKK164 pKa = 9.99KK165 pKa = 9.8QKK167 pKa = 10.5AGRR170 pKa = 11.84DD171 pKa = 3.44SVKK174 pKa = 10.83FIDD177 pKa = 3.97TNDD180 pKa = 3.44LKK182 pKa = 10.45TLLNFMEE189 pKa = 4.37KK190 pKa = 10.19QSFRR194 pKa = 11.84RR195 pKa = 11.84YY196 pKa = 8.64RR197 pKa = 11.84YY198 pKa = 7.54QVEE201 pKa = 4.13YY202 pKa = 11.1VFYY205 pKa = 10.82KK206 pKa = 10.89LLLATGLRR214 pKa = 11.84IGEE217 pKa = 4.13AVALEE222 pKa = 4.13WSDD225 pKa = 3.65IDD227 pKa = 5.53LEE229 pKa = 4.32NATIDD234 pKa = 3.45INKK237 pKa = 9.66SFSQEE242 pKa = 3.49LRR244 pKa = 11.84LVSTTKK250 pKa = 10.14TKK252 pKa = 10.93AGTRR256 pKa = 11.84LISIDD261 pKa = 3.8KK262 pKa = 8.85EE263 pKa = 4.68TVNLLKK269 pKa = 10.53LYY271 pKa = 8.46QVRR274 pKa = 11.84QRR276 pKa = 11.84QLFHH280 pKa = 6.65EE281 pKa = 4.75VGGGVPKK288 pKa = 10.71VAFATPTRR296 pKa = 11.84EE297 pKa = 3.87YY298 pKa = 10.93LSRR301 pKa = 11.84LTLQNNLNSRR311 pKa = 11.84CEE313 pKa = 3.75RR314 pKa = 11.84LGIPRR319 pKa = 11.84FTFHH323 pKa = 7.74AFRR326 pKa = 11.84HH327 pKa = 4.69THH329 pKa = 6.92ASLLLNAGISYY340 pKa = 10.68KK341 pKa = 10.23EE342 pKa = 3.61LQYY345 pKa = 11.52RR346 pKa = 11.84LGHH349 pKa = 5.94SNIAMTLDD357 pKa = 3.93VYY359 pKa = 11.5SHH361 pKa = 7.06LSKK364 pKa = 11.04DD365 pKa = 3.51KK366 pKa = 10.41EE367 pKa = 4.25KK368 pKa = 10.93EE369 pKa = 3.85AVSYY373 pKa = 9.5YY374 pKa = 10.51EE375 pKa = 4.18KK376 pKa = 10.61AINSII381 pKa = 3.83

Molecular weight: 43.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

21

0

21

3048

44

415

145.1

16.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.921 ± 0.533

0.623 ± 0.134

6.365 ± 0.738

6.988 ± 0.67

3.806 ± 0.214

4.298 ± 0.457

1.345 ± 0.159

8.53 ± 0.74

9.613 ± 0.955

11.286 ± 0.6

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.592 ± 0.295

6.496 ± 0.42

3.117 ± 0.529

4.003 ± 0.319

4.101 ± 0.464

5.249 ± 0.57

6.693 ± 0.557

4.298 ± 0.538

0.656 ± 0.151

5.02 ± 0.32
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski