Botrylloides leachii nidovirus
Average proteome isoelectric point is 7.21
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A650BL51|A0A650BL51_9NIDO Orf1a polyprotein OS=Botrylloides leachii nidovirus OX=2509395 PE=4 SV=1
MM1 pKa = 7.22 SRR3 pKa = 11.84 SNASRR8 pKa = 11.84 TKK10 pKa = 10.41 SGLPNVFNLPPDD22 pKa = 3.75 RR23 pKa = 11.84 RR24 pKa = 11.84 DD25 pKa = 3.0 KK26 pKa = 11.27 DD27 pKa = 3.62 VAGRR31 pKa = 11.84 PDD33 pKa = 4.97 LFTKK37 pKa = 9.84 YY38 pKa = 10.05 KK39 pKa = 10.21 PSSQRR44 pKa = 11.84 KK45 pKa = 7.76 RR46 pKa = 11.84 NARR49 pKa = 11.84 PGSKK53 pKa = 9.59 RR54 pKa = 11.84 FQGKK58 pKa = 9.57 SGSNANGSQQSQPRR72 pKa = 11.84 VGEE75 pKa = 3.95 AKK77 pKa = 10.55 KK78 pKa = 10.77 SGNLVNEE85 pKa = 4.64 SARR88 pKa = 11.84 SLQQLNGGRR97 pKa = 11.84 VFNQRR102 pKa = 11.84 QAPQRR107 pKa = 11.84 RR108 pKa = 11.84 RR109 pKa = 11.84 PQEE112 pKa = 3.57 NANTQRR118 pKa = 11.84 TVNFRR123 pKa = 11.84 GDD125 pKa = 3.26 TYY127 pKa = 11.28 SVFRR131 pKa = 11.84 TFEE134 pKa = 4.05 INGVRR139 pKa = 11.84 VLVSYY144 pKa = 8.26 TAAATAKK151 pKa = 10.76 AEE153 pKa = 4.27 TFSNDD158 pKa = 2.87 KK159 pKa = 10.47 VSASARR165 pKa = 11.84 RR166 pKa = 11.84 TLSTITSPGQTITKK180 pKa = 8.98 TVVTYY185 pKa = 10.49 DD186 pKa = 3.14 KK187 pKa = 10.74 EE188 pKa = 4.36 GRR190 pKa = 11.84 EE191 pKa = 3.99 VLHH194 pKa = 7.55 DD195 pKa = 3.72 YY196 pKa = 8.38 TLKK199 pKa = 10.53 KK200 pKa = 10.71 VRR202 pKa = 11.84 VTKK205 pKa = 10.84 ASGRR209 pKa = 11.84 TCDD212 pKa = 3.6 ASEE215 pKa = 3.96 MLYY218 pKa = 10.9 SFALRR223 pKa = 11.84 FFEE226 pKa = 5.41 RR227 pKa = 11.84 YY228 pKa = 9.93 DD229 pKa = 3.35 IEE231 pKa = 4.36 TLRR234 pKa = 11.84 FADD237 pKa = 4.75 DD238 pKa = 3.43 FANAQFARR246 pKa = 11.84 LTRR249 pKa = 11.84 CFRR252 pKa = 11.84 YY253 pKa = 9.76 ALHH256 pKa = 6.63 VGRR259 pKa = 11.84 DD260 pKa = 3.7 DD261 pKa = 3.63 QVAIPEE267 pKa = 4.34 ANLLNLGQISGLANYY282 pKa = 10.32 DD283 pKa = 3.54 DD284 pKa = 5.95 DD285 pKa = 4.77 DD286 pKa = 5.81 ALVIEE291 pKa = 4.28 ICKK294 pKa = 9.87 IFEE297 pKa = 4.38 VPVPDD302 pKa = 3.9 AVLMKK307 pKa = 9.89 QIRR310 pKa = 11.84 DD311 pKa = 3.29 RR312 pKa = 11.84 FQSFNYY318 pKa = 9.56 SGPYY322 pKa = 9.23 QISPPRR328 pKa = 11.84 RR329 pKa = 11.84 AKK331 pKa = 10.38 AVEE334 pKa = 4.3 VKK336 pKa = 10.43 PSPLLQDD343 pKa = 3.44 SGSINPVIKK352 pKa = 10.72 KK353 pKa = 9.64 EE354 pKa = 4.02 VTRR357 pKa = 11.84 PSAKK361 pKa = 10.14 AGPSGTTKK369 pKa = 10.59 PKK371 pKa = 10.09 ILEE374 pKa = 4.38 SSDD377 pKa = 3.72 EE378 pKa = 4.25 PVQEE382 pKa = 3.89 MKK384 pKa = 11.19 GPVEE388 pKa = 3.93 PLEE391 pKa = 4.32 KK392 pKa = 10.76 EE393 pKa = 3.85 NTNEE397 pKa = 3.57 ITRR400 pKa = 11.84 SQFDD404 pKa = 3.45 ALVAFGVDD412 pKa = 2.77 RR413 pKa = 11.84 DD414 pKa = 4.28 DD415 pKa = 3.96 YY416 pKa = 10.84 VGCGVISQIEE426 pKa = 3.94 IDD428 pKa = 3.76 GVDD431 pKa = 2.72 RR432 pKa = 11.84 VMIMTAEE439 pKa = 4.16 HH440 pKa = 6.25 VLDD443 pKa = 3.98 SAEE446 pKa = 3.96 SVYY449 pKa = 11.02 INLAQEE455 pKa = 4.34 NEE457 pKa = 4.25 LCLSIDD463 pKa = 3.77 DD464 pKa = 4.74 CSVLDD469 pKa = 3.82 VRR471 pKa = 11.84 DD472 pKa = 4.29 SKK474 pKa = 11.23 PHH476 pKa = 6.58 DD477 pKa = 3.86 IIFIVFEE484 pKa = 4.49 DD485 pKa = 4.14 LSIEE489 pKa = 4.22 TVEE492 pKa = 4.18 ALGIKK497 pKa = 9.1 PVPFNICDD505 pKa = 3.62 TTEE508 pKa = 3.61 RR509 pKa = 11.84 TAAMSLCYY517 pKa = 9.54 TWDD520 pKa = 3.36 AGVCPKK526 pKa = 10.58 LSNIEE531 pKa = 4.04 PTSVTFNFDD540 pKa = 3.02 CDD542 pKa = 4.01 PNVLSRR548 pKa = 11.84 SWFGKK553 pKa = 9.46 SGAPVIVDD561 pKa = 3.76 GAACGVVATCGYY573 pKa = 10.41 KK574 pKa = 10.43 PLTGRR579 pKa = 11.84 KK580 pKa = 8.26 SFEE583 pKa = 3.77 YY584 pKa = 10.08 SGLVILTGQGWQTIQDD600 pKa = 3.61 FSVEE604 pKa = 4.14 KK605 pKa = 9.46 TCYY608 pKa = 9.02 RR609 pKa = 11.84 TTKK612 pKa = 10.74 NDD614 pKa = 3.24 GLQAKK619 pKa = 9.51 LWVPLLLCLAFQGSTQALHH638 pKa = 6.64 YY639 pKa = 8.33 YY640 pKa = 9.93 TGTTLDD646 pKa = 3.67 TFISTLEE653 pKa = 4.14 VMTEE657 pKa = 3.87 PQKK660 pKa = 10.19 TMTYY664 pKa = 10.39 LFSDD668 pKa = 4.07 EE669 pKa = 4.27 VKK671 pKa = 10.07 VAIVFTQDD679 pKa = 2.44 GTDD682 pKa = 4.68 PYY684 pKa = 10.66 TKK686 pKa = 9.74 WLFANNHH693 pKa = 5.35 PVAVFGFNFITPTEE707 pKa = 4.13 DD708 pKa = 2.69 TTEE711 pKa = 4.07 YY712 pKa = 10.76 VAPDD716 pKa = 3.44 WFAEE720 pKa = 4.62 VINEE724 pKa = 4.07 AYY726 pKa = 10.44 VWDD729 pKa = 4.28 EE730 pKa = 3.86 SFGVYY735 pKa = 9.94 NRR737 pKa = 11.84 IYY739 pKa = 10.49 TDD741 pKa = 2.42 MHH743 pKa = 5.48 ARR745 pKa = 11.84 KK746 pKa = 8.66 WPKK749 pKa = 10.07 TKK751 pKa = 9.7 MQDD754 pKa = 2.68 FATAVGQLMSGAVDD768 pKa = 4.0 LPLYY772 pKa = 10.1 PVVCVPKK779 pKa = 8.34 TTSGVTFNSVVGLSPEE795 pKa = 4.13 PFIHH799 pKa = 7.24 NYY801 pKa = 9.23 GCVPAVPCKK810 pKa = 10.26 AAIEE814 pKa = 4.54 SYY816 pKa = 7.63 MTSSCGPRR824 pKa = 11.84 NIDD827 pKa = 3.05 GTKK830 pKa = 10.12 YY831 pKa = 10.47 INDD834 pKa = 3.55 FPFVSFTGKK843 pKa = 9.68 PFDD846 pKa = 5.12 RR847 pKa = 11.84 KK848 pKa = 9.97 RR849 pKa = 11.84 FWYY852 pKa = 10.1 NGPKK856 pKa = 9.8 PGIAIDD862 pKa = 3.95 TIEE865 pKa = 4.47 TIEE868 pKa = 4.3 GQDD871 pKa = 4.77 RR872 pKa = 11.84 INDD875 pKa = 4.05 LLNGIVPSLRR885 pKa = 11.84 LKK887 pKa = 9.21 LTHH890 pKa = 6.66 NSRR893 pKa = 11.84 PMYY896 pKa = 10.03 YY897 pKa = 9.27 YY898 pKa = 10.88 DD899 pKa = 5.94 SIATDD904 pKa = 3.64 PLAWLKK910 pKa = 10.83 NRR912 pKa = 11.84 TISSYY917 pKa = 9.79 STLDD921 pKa = 3.06 RR922 pKa = 11.84 SIWRR926 pKa = 11.84 KK927 pKa = 9.48 PMIPLQKK934 pKa = 10.31 SWLTYY939 pKa = 9.77 PRR941 pKa = 11.84 ALVMPDD947 pKa = 4.35 DD948 pKa = 4.07 PTLALKK954 pKa = 10.41 KK955 pKa = 10.41 LYY957 pKa = 10.12 LRR959 pKa = 11.84 NYY961 pKa = 9.57 QMSSDD966 pKa = 4.21 DD967 pKa = 3.69 SASICTFPVDD977 pKa = 3.25 WGKK980 pKa = 10.04 SHH982 pKa = 6.82 YY983 pKa = 9.57 IVSGALCGSEE993 pKa = 4.34 VKK995 pKa = 8.92 ITRR998 pKa = 11.84 VPYY1001 pKa = 10.07 FPLYY1005 pKa = 8.58 VAKK1008 pKa = 10.29 IRR1010 pKa = 11.84 PATSHH1015 pKa = 5.75 GSYY1018 pKa = 10.56 YY1019 pKa = 10.75 YY1020 pKa = 10.34 DD1021 pKa = 3.23 INRR1024 pKa = 11.84 QIVRR1028 pKa = 11.84 FVSCNPEE1035 pKa = 3.52 TLEE1038 pKa = 4.54 RR1039 pKa = 11.84 FNASAPNNVSEE1050 pKa = 4.4 YY1051 pKa = 9.23 TRR1053 pKa = 11.84 CSQIEE1058 pKa = 4.09 INSWIVPKK1066 pKa = 9.62 VTNPLYY1072 pKa = 9.09 VQLVKK1077 pKa = 10.2 FVAAEE1082 pKa = 3.96 SIYY1085 pKa = 10.32 PRR1087 pKa = 11.84 EE1088 pKa = 3.95 QVIPKK1093 pKa = 9.37 YY1094 pKa = 10.72 NIYY1097 pKa = 10.29 FEE1099 pKa = 4.81 KK1100 pKa = 10.9 APSTPVAEE1108 pKa = 4.52 CTSISSIFASEE1119 pKa = 4.94 LISCFLITNDD1129 pKa = 2.95 SSLVLKK1135 pKa = 10.8 HH1136 pKa = 6.25 FGDD1139 pKa = 4.63 RR1140 pKa = 11.84 IYY1142 pKa = 11.13 LVDD1145 pKa = 3.92 HH1146 pKa = 5.96 GTKK1149 pKa = 10.27 AFHH1152 pKa = 6.87 SLGLVSDD1159 pKa = 5.22 EE1160 pKa = 3.7 ISVYY1164 pKa = 10.34 QGEE1167 pKa = 4.41 TLKK1170 pKa = 11.06 PEE1172 pKa = 3.86 NRR1174 pKa = 11.84 TSKK1177 pKa = 10.42 HH1178 pKa = 5.8 CFPIQKK1184 pKa = 9.87 LMHH1187 pKa = 6.81 HH1188 pKa = 6.62 GPAPKK1193 pKa = 9.96 DD1194 pKa = 3.32 ASSTITYY1201 pKa = 10.36 AKK1203 pKa = 10.18 FGNTVYY1209 pKa = 10.92 KK1210 pKa = 10.71 LPAGHH1215 pKa = 5.96 VTNTTATPGDD1225 pKa = 3.81 WAPQSDD1231 pKa = 4.55 APSDD1235 pKa = 3.66 PANDD1239 pKa = 4.05 GSRR1242 pKa = 11.84 DD1243 pKa = 3.86 LPDD1246 pKa = 4.79 LPTLSVSDD1254 pKa = 3.62 GFGFKK1259 pKa = 10.41 AVLHH1263 pKa = 5.94 CQNPPEE1269 pKa = 3.99 LHH1271 pKa = 6.35 VGFSEE1276 pKa = 4.98 DD1277 pKa = 3.59 GQSLRR1282 pKa = 11.84 LRR1284 pKa = 11.84 SPGNMIRR1291 pKa = 11.84 VRR1293 pKa = 11.84 RR1294 pKa = 11.84 SVTKK1298 pKa = 10.53 QEE1300 pKa = 3.83 GTVPFVQEE1308 pKa = 3.91 FGYY1311 pKa = 11.39 VNLKK1315 pKa = 10.61 LSEE1318 pKa = 4.25 LCMEE1322 pKa = 5.33 PSDD1325 pKa = 4.38 DD1326 pKa = 3.81 QCKK1329 pKa = 10.3 LFATVGSDD1337 pKa = 3.03 SRR1339 pKa = 11.84 PRR1341 pKa = 11.84 VVKK1344 pKa = 8.26 LTWNDD1349 pKa = 3.53 CPISNSADD1357 pKa = 3.29 QISYY1361 pKa = 10.62 HH1362 pKa = 7.07 LGDD1365 pKa = 4.23 MSRR1368 pKa = 11.84 TMCRR1372 pKa = 11.84 HH1373 pKa = 5.61 PVLAYY1378 pKa = 10.23 VIVGLTSAVLFIVLSMVIYY1397 pKa = 7.45 TCCGACLAKK1406 pKa = 10.46 CCWKK1410 pKa = 10.04 ICCRR1414 pKa = 11.84 CRR1416 pKa = 11.84 RR1417 pKa = 11.84 TKK1419 pKa = 10.42 SKK1421 pKa = 10.85 RR1422 pKa = 11.84 DD1423 pKa = 3.38 LSEE1426 pKa = 4.46 EE1427 pKa = 4.05 EE1428 pKa = 4.13 VSLLEE1433 pKa = 4.22 IEE1435 pKa = 5.18 RR1436 pKa = 11.84 PAQSSSEE1443 pKa = 4.06 QEE1445 pKa = 4.06 TQLSFRR1451 pKa = 11.84 SGNAGGRR1458 pKa = 11.84 KK1459 pKa = 5.94 TAAVRR1464 pKa = 11.84 RR1465 pKa = 11.84 SALALSILSVILNGADD1481 pKa = 3.17 AFDD1484 pKa = 3.7 ISSEE1488 pKa = 4.04 KK1489 pKa = 9.55 VTLDD1493 pKa = 3.39 GNKK1496 pKa = 9.97 LLYY1499 pKa = 10.69 SSVITSTSAVTNGYY1513 pKa = 7.59 TFTYY1517 pKa = 10.07 DD1518 pKa = 2.92 IHH1520 pKa = 7.0 PKK1522 pKa = 10.3 LGNLVSDD1529 pKa = 4.67 PKK1531 pKa = 10.7 RR1532 pKa = 11.84 LTVTVHH1538 pKa = 7.62 DD1539 pKa = 4.57 ILCTYY1544 pKa = 9.53 QNNVRR1549 pKa = 11.84 YY1550 pKa = 6.32 WTSDD1554 pKa = 3.01 VHH1556 pKa = 8.22 SMYY1559 pKa = 10.54 EE1560 pKa = 4.13 EE1561 pKa = 4.65 KK1562 pKa = 10.93 YY1563 pKa = 9.18 KK1564 pKa = 11.16 CCGTADD1570 pKa = 4.82 GISDD1574 pKa = 4.03 NYY1576 pKa = 11.29 RR1577 pKa = 11.84 LMSTDD1582 pKa = 3.13 QHH1584 pKa = 7.52 AMLYY1588 pKa = 10.01 SHH1590 pKa = 7.24 TFDD1593 pKa = 5.16 GVFPCAWNWGACFCCGSDD1611 pKa = 3.48 NQAKK1615 pKa = 8.4 TFMLFWPNNDD1625 pKa = 2.58 WHH1627 pKa = 6.41 PRR1629 pKa = 11.84 NYY1631 pKa = 9.72 AVCYY1635 pKa = 9.59 NSHH1638 pKa = 7.12 PVHH1641 pKa = 7.66 SMAKK1645 pKa = 10.32 LEE1647 pKa = 4.02 VCLDD1651 pKa = 3.92 HH1652 pKa = 7.23 VCKK1655 pKa = 10.12 QVNVSRR1661 pKa = 11.84 LNPSVTALEE1670 pKa = 4.78 GIEE1673 pKa = 3.99 IRR1675 pKa = 11.84 VSSLIDD1681 pKa = 3.29 IKK1683 pKa = 10.91 CDD1685 pKa = 3.54 YY1686 pKa = 10.66 QGDD1689 pKa = 4.13 YY1690 pKa = 11.53 VLFDD1694 pKa = 3.84 GNIYY1698 pKa = 10.09 SISYY1702 pKa = 9.82 SPYY1705 pKa = 9.17 AGAKK1709 pKa = 9.22 PGEE1712 pKa = 4.46 LGDD1715 pKa = 3.67 VASRR1719 pKa = 11.84 TTTYY1723 pKa = 10.56 TLAPSDD1729 pKa = 4.44 FYY1731 pKa = 11.48 AAEE1734 pKa = 4.26 LKK1736 pKa = 10.93 EE1737 pKa = 4.11 EE1738 pKa = 4.51 LFPDD1742 pKa = 3.89 AANGFRR1748 pKa = 11.84 IKK1750 pKa = 9.33 EE1751 pKa = 4.33 TEE1753 pKa = 3.69 PGFVVFRR1760 pKa = 11.84 KK1761 pKa = 10.16 SVDD1764 pKa = 3.35 QNVIRR1769 pKa = 11.84 PISLSYY1775 pKa = 10.68 DD1776 pKa = 2.87 GHH1778 pKa = 5.14 TTVTDD1783 pKa = 3.23 VDD1785 pKa = 3.72 KK1786 pKa = 11.47 LQFTVEE1792 pKa = 4.06 QHH1794 pKa = 6.8 DD1795 pKa = 4.14 LTAGSLTVQLTAKK1808 pKa = 10.33 DD1809 pKa = 3.85 VVFEE1813 pKa = 5.02 AIHH1816 pKa = 6.85 LYY1818 pKa = 10.13 PIITNVTFSTRR1829 pKa = 11.84 HH1830 pKa = 4.83 IGCYY1834 pKa = 10.13 NCDD1837 pKa = 3.4 SPQEE1841 pKa = 4.16 LNVSFTSDD1849 pKa = 2.07 IFANVYY1855 pKa = 8.75 FSCFPAICVEE1865 pKa = 4.22 QVFYY1869 pKa = 11.14 AHH1871 pKa = 7.41 KK1872 pKa = 9.08 GHH1874 pKa = 6.9 NIGSVRR1880 pKa = 11.84 LLPSARR1886 pKa = 11.84 NTHH1889 pKa = 4.94 VCFSFAGPNSTFCTHH1904 pKa = 5.24 VTAEE1908 pKa = 4.23 PPKK1911 pKa = 10.76 SRR1913 pKa = 11.84 ILPDD1917 pKa = 3.0 VHH1919 pKa = 8.09 VVIDD1923 pKa = 4.14 GNGTSSGSSGFWGHH1937 pKa = 5.65 FWGIFGSIAAIIGGILLTALIIYY1960 pKa = 9.82 IIYY1963 pKa = 9.33 KK1964 pKa = 10.19 CCFASTRR1971 pKa = 11.84 ALTSLAVLAFQTKK1984 pKa = 7.34 KK1985 pKa = 8.86 TKK1987 pKa = 10.33 KK1988 pKa = 9.57 FRR1990 pKa = 11.84 QDD1992 pKa = 2.92 LTPWRR1997 pKa = 11.84 KK1998 pKa = 9.73 YY1999 pKa = 9.81 GG2000 pKa = 3.42
Molecular weight: 222.63 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.331
IPC2_protein 6.491
IPC_protein 6.453
Toseland 6.465
ProMoST 6.971
Dawson 6.942
Bjellqvist 7.073
Wikipedia 6.912
Rodwell 6.942
Grimsley 6.547
Solomon 6.942
Lehninger 6.956
Nozaki 7.366
DTASelect 7.293
Thurlkill 7.337
EMBOSS 7.307
Sillero 7.41
Patrickios 3.884
IPC_peptide 6.956
IPC2_peptide 7.0
IPC2.peptide.svr19 6.845
Protein with the highest isoelectric point:
>tr|A0A650BL21|A0A650BL21_9NIDO ORF1ab polyprotein OS=Botrylloides leachii nidovirus OX=2509395 PE=3 SV=1
MM1 pKa = 7.48 SSISHH6 pKa = 5.58 RR7 pKa = 11.84 TEE9 pKa = 3.56 EE10 pKa = 4.17 TKK12 pKa = 10.21 MLLEE16 pKa = 5.47 DD17 pKa = 3.64 PTFLQSTNLLPSEE30 pKa = 4.52 KK31 pKa = 10.45 EE32 pKa = 3.84 MLDD35 pKa = 3.28 RR36 pKa = 11.84 ALKK39 pKa = 10.44 DD40 pKa = 3.39 FRR42 pKa = 11.84 EE43 pKa = 4.23 NLGQMLTARR52 pKa = 11.84 NKK54 pKa = 9.84 VSQGLAKK61 pKa = 10.14 PRR63 pKa = 11.84 NQAILLTSQLDD74 pKa = 3.63 LSNNLMVDD82 pKa = 4.04 VYY84 pKa = 9.64 STNVKK89 pKa = 9.76 RR90 pKa = 11.84 LKK92 pKa = 11.18 GEE94 pKa = 4.29 DD95 pKa = 3.72 PKK97 pKa = 11.62 KK98 pKa = 9.37 MQTPRR103 pKa = 11.84 EE104 pKa = 4.0 QSTSEE109 pKa = 4.19 EE110 pKa = 3.8 IPIRR114 pKa = 11.84 SSGRR118 pKa = 11.84 SKK120 pKa = 11.33 SMEE123 pKa = 4.07 SGCWSRR129 pKa = 11.84 IRR131 pKa = 11.84 QLLLPKK137 pKa = 10.1 PKK139 pKa = 10.31 LFQTIKK145 pKa = 9.84 YY146 pKa = 8.75 QPLRR150 pKa = 11.84 EE151 pKa = 4.55 GPCLPSLAQVKK162 pKa = 9.74 PSQRR166 pKa = 11.84 PLSLTTKK173 pKa = 10.01 KK174 pKa = 10.8 GEE176 pKa = 4.25 KK177 pKa = 10.25 FSTTTPP183 pKa = 3.3
Molecular weight: 20.76 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.003
IPC2_protein 9.107
IPC_protein 9.048
Toseland 10.218
ProMoST 9.677
Dawson 10.292
Bjellqvist 9.882
Wikipedia 10.379
Rodwell 10.921
Grimsley 10.321
Solomon 10.321
Lehninger 10.321
Nozaki 10.189
DTASelect 9.867
Thurlkill 10.189
EMBOSS 10.584
Sillero 10.204
Patrickios 10.672
IPC_peptide 10.335
IPC2_peptide 8.317
IPC2.peptide.svr19 8.131
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
11606
183
5957
2901.5
330.48
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.738 ± 0.359
2.654 ± 0.07
5.583 ± 0.105
6.066 ± 0.478
5.256 ± 0.173
5.239 ± 0.162
2.438 ± 0.191
6.54 ± 0.313
7.384 ± 0.649
7.755 ± 0.152
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.326 ± 0.274
4.963 ± 0.147
4.144 ± 0.51
3.472 ± 0.101
4.644 ± 0.194
6.617 ± 0.695
7.419 ± 0.215
6.324 ± 0.422
1.146 ± 0.045
4.291 ± 0.109
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here