Bordetella ansorpii

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella

Average proteome isoelectric point is 6.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5495 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A157SI34|A0A157SI34_9BORD Uncharacterized protein OS=Bordetella ansorpii OX=288768 GN=SAMEA3906486_02913 PE=4 SV=1
MM1 pKa = 7.52LSAIEE6 pKa = 4.4QLIQRR11 pKa = 11.84NLADD15 pKa = 4.01GSDD18 pKa = 3.38IAVSAGVSQDD28 pKa = 3.72MIQQAEE34 pKa = 4.27SMLGVRR40 pKa = 11.84FPVSYY45 pKa = 10.47RR46 pKa = 11.84AFLATYY52 pKa = 9.14GAIEE56 pKa = 4.41IDD58 pKa = 3.88CQSFAGLTPEE68 pKa = 4.71GKK70 pKa = 10.51VGDD73 pKa = 4.34DD74 pKa = 3.54CDD76 pKa = 3.76VVSFTRR82 pKa = 11.84YY83 pKa = 9.59ARR85 pKa = 11.84EE86 pKa = 4.29HH87 pKa = 6.57YY88 pKa = 10.28SLPDD92 pKa = 3.6PYY94 pKa = 11.2VALDD98 pKa = 3.8FQDD101 pKa = 3.62GDD103 pKa = 3.31FWLCLDD109 pKa = 4.44TSQVDD114 pKa = 3.81AQGEE118 pKa = 4.73SPVVLVSPVDD128 pKa = 3.75GTRR131 pKa = 11.84KK132 pKa = 9.85GPAVAEE138 pKa = 4.31SWASYY143 pKa = 7.9LTSYY147 pKa = 11.21LSAA150 pKa = 5.58

Molecular weight: 16.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A157M585|A0A157M585_9BORD 30S ribosomal protein S7 OS=Bordetella ansorpii OX=288768 GN=rpsG PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.36RR3 pKa = 11.84TYY5 pKa = 10.06QPSVTRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.0RR14 pKa = 11.84THH16 pKa = 5.76GFRR19 pKa = 11.84VRR21 pKa = 11.84MKK23 pKa = 9.39TRR25 pKa = 11.84GGRR28 pKa = 11.84AVLNARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.65GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5495

0

5495

1836431

29

5643

334.2

36.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.119 ± 0.046

0.868 ± 0.011

5.584 ± 0.028

4.943 ± 0.029

3.21 ± 0.023

8.652 ± 0.056

2.168 ± 0.018

4.253 ± 0.024

2.642 ± 0.028

10.702 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.472 ± 0.02

2.509 ± 0.026

5.459 ± 0.031

4.062 ± 0.019

7.474 ± 0.042

5.404 ± 0.03

5.137 ± 0.047

7.563 ± 0.025

1.398 ± 0.015

2.381 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski