Amino acid dipepetide frequency for Wenling picorna-like virus 8

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
8.557AlaAla: 8.557 ± 0.0
1.116AlaCys: 1.116 ± 0.0
6.324AlaAsp: 6.324 ± 0.0
3.348AlaGlu: 3.348 ± 0.0
1.488AlaPhe: 1.488 ± 0.0
6.324AlaGly: 6.324 ± 0.0
1.488AlaHis: 1.488 ± 0.0
2.604AlaIle: 2.604 ± 0.0
4.092AlaLys: 4.092 ± 0.0
8.185AlaLeu: 8.185 ± 0.0
3.72AlaMet: 3.72 ± 0.0
2.604AlaAsn: 2.604 ± 0.0
1.86AlaPro: 1.86 ± 0.0
2.976AlaGln: 2.976 ± 0.0
1.488AlaArg: 1.488 ± 0.0
4.092AlaSer: 4.092 ± 0.0
7.812AlaThr: 7.812 ± 0.0
7.812AlaVal: 7.812 ± 0.0
0.744AlaTrp: 0.744 ± 0.0
1.86AlaTyr: 1.86 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.488CysAla: 1.488 ± 0.0
0.372CysCys: 0.372 ± 0.0
0.744CysAsp: 0.744 ± 0.0
0.0CysGlu: 0.0 ± 0.0
1.488CysPhe: 1.488 ± 0.0
1.116CysGly: 1.116 ± 0.0
0.372CysHis: 0.372 ± 0.0
0.372CysIle: 0.372 ± 0.0
0.744CysLys: 0.744 ± 0.0
1.86CysLeu: 1.86 ± 0.0
1.116CysMet: 1.116 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.372CysPro: 0.372 ± 0.0
0.0CysGln: 0.0 ± 0.0
1.86CysArg: 1.86 ± 0.0
0.372CysSer: 0.372 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.744CysVal: 0.744 ± 0.0
0.372CysTrp: 0.372 ± 0.0
0.372CysTyr: 0.372 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.58AspAla: 5.58 ± 0.0
0.372AspCys: 0.372 ± 0.0
5.208AspAsp: 5.208 ± 0.0
2.976AspGlu: 2.976 ± 0.0
2.604AspPhe: 2.604 ± 0.0
3.72AspGly: 3.72 ± 0.0
1.488AspHis: 1.488 ± 0.0
2.976AspIle: 2.976 ± 0.0
2.976AspLys: 2.976 ± 0.0
4.836AspLeu: 4.836 ± 0.0
1.488AspMet: 1.488 ± 0.0
2.232AspAsn: 2.232 ± 0.0
2.976AspPro: 2.976 ± 0.0
1.86AspGln: 1.86 ± 0.0
1.488AspArg: 1.488 ± 0.0
2.976AspSer: 2.976 ± 0.0
4.092AspThr: 4.092 ± 0.0
5.58AspVal: 5.58 ± 0.0
0.744AspTrp: 0.744 ± 0.0
1.86AspTyr: 1.86 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.58GluAla: 5.58 ± 0.0
1.86GluCys: 1.86 ± 0.0
1.488GluAsp: 1.488 ± 0.0
5.208GluGlu: 5.208 ± 0.0
1.488GluPhe: 1.488 ± 0.0
4.092GluGly: 4.092 ± 0.0
2.232GluHis: 2.232 ± 0.0
2.232GluIle: 2.232 ± 0.0
4.464GluLys: 4.464 ± 0.0
4.464GluLeu: 4.464 ± 0.0
1.86GluMet: 1.86 ± 0.0
1.488GluAsn: 1.488 ± 0.0
3.72GluPro: 3.72 ± 0.0
2.976GluGln: 2.976 ± 0.0
4.092GluArg: 4.092 ± 0.0
2.232GluSer: 2.232 ± 0.0
2.604GluThr: 2.604 ± 0.0
4.092GluVal: 4.092 ± 0.0
1.116GluTrp: 1.116 ± 0.0
0.744GluTyr: 0.744 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.72PheAla: 3.72 ± 0.0
0.0PheCys: 0.0 ± 0.0
2.976PheAsp: 2.976 ± 0.0
2.604PheGlu: 2.604 ± 0.0
1.86PhePhe: 1.86 ± 0.0
3.348PheGly: 3.348 ± 0.0
0.744PheHis: 0.744 ± 0.0
0.744PheIle: 0.744 ± 0.0
1.86PheLys: 1.86 ± 0.0
3.348PheLeu: 3.348 ± 0.0
2.232PheMet: 2.232 ± 0.0
1.488PheAsn: 1.488 ± 0.0
2.604PhePro: 2.604 ± 0.0
1.86PheGln: 1.86 ± 0.0
1.116PheArg: 1.116 ± 0.0
2.232PheSer: 2.232 ± 0.0
3.72PheThr: 3.72 ± 0.0
2.604PheVal: 2.604 ± 0.0
0.744PheTrp: 0.744 ± 0.0
3.348PheTyr: 3.348 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.092GlyAla: 4.092 ± 0.0
1.116GlyCys: 1.116 ± 0.0
5.952GlyAsp: 5.952 ± 0.0
4.464GlyGlu: 4.464 ± 0.0
2.232GlyPhe: 2.232 ± 0.0
4.836GlyGly: 4.836 ± 0.0
2.604GlyHis: 2.604 ± 0.0
2.232GlyIle: 2.232 ± 0.0
1.86GlyLys: 1.86 ± 0.0
7.812GlyLeu: 7.812 ± 0.0
1.86GlyMet: 1.86 ± 0.0
1.116GlyAsn: 1.116 ± 0.0
1.488GlyPro: 1.488 ± 0.0
2.604GlyGln: 2.604 ± 0.0
2.604GlyArg: 2.604 ± 0.0
4.836GlySer: 4.836 ± 0.0
4.836GlyThr: 4.836 ± 0.0
5.952GlyVal: 5.952 ± 0.0
2.604GlyTrp: 2.604 ± 0.0
4.092GlyTyr: 4.092 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.116HisAla: 1.116 ± 0.0
0.372HisCys: 0.372 ± 0.0
0.744HisAsp: 0.744 ± 0.0
1.116HisGlu: 1.116 ± 0.0
1.488HisPhe: 1.488 ± 0.0
0.744HisGly: 0.744 ± 0.0
0.744HisHis: 0.744 ± 0.0
1.488HisIle: 1.488 ± 0.0
1.488HisLys: 1.488 ± 0.0
3.348HisLeu: 3.348 ± 0.0
1.488HisMet: 1.488 ± 0.0
1.116HisAsn: 1.116 ± 0.0
1.86HisPro: 1.86 ± 0.0
2.232HisGln: 2.232 ± 0.0
1.116HisArg: 1.116 ± 0.0
0.372HisSer: 0.372 ± 0.0
1.116HisThr: 1.116 ± 0.0
2.604HisVal: 2.604 ± 0.0
0.0HisTrp: 0.0 ± 0.0
1.116HisTyr: 1.116 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.232IleAla: 2.232 ± 0.0
0.744IleCys: 0.744 ± 0.0
2.604IleAsp: 2.604 ± 0.0
3.72IleGlu: 3.72 ± 0.0
1.86IlePhe: 1.86 ± 0.0
2.976IleGly: 2.976 ± 0.0
0.744IleHis: 0.744 ± 0.0
0.0IleIle: 0.0 ± 0.0
2.232IleLys: 2.232 ± 0.0
1.86IleLeu: 1.86 ± 0.0
2.232IleMet: 2.232 ± 0.0
1.116IleAsn: 1.116 ± 0.0
4.092IlePro: 4.092 ± 0.0
2.976IleGln: 2.976 ± 0.0
2.604IleArg: 2.604 ± 0.0
3.348IleSer: 3.348 ± 0.0
2.976IleThr: 2.976 ± 0.0
3.72IleVal: 3.72 ± 0.0
0.744IleTrp: 0.744 ± 0.0
0.372IleTyr: 0.372 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.976LysAla: 2.976 ± 0.0
0.744LysCys: 0.744 ± 0.0
4.464LysAsp: 4.464 ± 0.0
2.232LysGlu: 2.232 ± 0.0
3.72LysPhe: 3.72 ± 0.0
4.464LysGly: 4.464 ± 0.0
0.744LysHis: 0.744 ± 0.0
3.348LysIle: 3.348 ± 0.0
5.58LysLys: 5.58 ± 0.0
5.208LysLeu: 5.208 ± 0.0
1.488LysMet: 1.488 ± 0.0
1.86LysAsn: 1.86 ± 0.0
2.604LysPro: 2.604 ± 0.0
2.976LysGln: 2.976 ± 0.0
2.976LysArg: 2.976 ± 0.0
2.604LysSer: 2.604 ± 0.0
2.232LysThr: 2.232 ± 0.0
4.464LysVal: 4.464 ± 0.0
1.116LysTrp: 1.116 ± 0.0
1.488LysTyr: 1.488 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.068LeuAla: 7.068 ± 0.0
2.604LeuCys: 2.604 ± 0.0
4.464LeuAsp: 4.464 ± 0.0
4.464LeuGlu: 4.464 ± 0.0
2.232LeuPhe: 2.232 ± 0.0
4.836LeuGly: 4.836 ± 0.0
2.976LeuHis: 2.976 ± 0.0
3.72LeuIle: 3.72 ± 0.0
7.068LeuLys: 7.068 ± 0.0
7.812LeuLeu: 7.812 ± 0.0
2.604LeuMet: 2.604 ± 0.0
1.86LeuAsn: 1.86 ± 0.0
3.72LeuPro: 3.72 ± 0.0
2.976LeuGln: 2.976 ± 0.0
5.208LeuArg: 5.208 ± 0.0
3.72LeuSer: 3.72 ± 0.0
5.58LeuThr: 5.58 ± 0.0
7.068LeuVal: 7.068 ± 0.0
0.744LeuTrp: 0.744 ± 0.0
2.604LeuTyr: 2.604 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
4.092MetAla: 4.092 ± 0.0
0.744MetCys: 0.744 ± 0.0
1.488MetAsp: 1.488 ± 0.0
1.488MetGlu: 1.488 ± 0.0
1.116MetPhe: 1.116 ± 0.0
1.116MetGly: 1.116 ± 0.0
1.116MetHis: 1.116 ± 0.0
1.116MetIle: 1.116 ± 0.0
1.86MetLys: 1.86 ± 0.0
3.72MetLeu: 3.72 ± 0.0
0.372MetMet: 0.372 ± 0.0
1.116MetAsn: 1.116 ± 0.0
1.86MetPro: 1.86 ± 0.0
0.372MetGln: 0.372 ± 0.0
2.232MetArg: 2.232 ± 0.0
2.604MetSer: 2.604 ± 0.0
2.232MetThr: 2.232 ± 0.0
3.348MetVal: 3.348 ± 0.0
0.372MetTrp: 0.372 ± 0.0
0.744MetTyr: 0.744 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.604AsnAla: 2.604 ± 0.0
0.372AsnCys: 0.372 ± 0.0
0.0AsnAsp: 0.0 ± 0.0
0.372AsnGlu: 0.372 ± 0.0
1.488AsnPhe: 1.488 ± 0.0
1.116AsnGly: 1.116 ± 0.0
0.372AsnHis: 0.372 ± 0.0
1.116AsnIle: 1.116 ± 0.0
2.232AsnLys: 2.232 ± 0.0
3.348AsnLeu: 3.348 ± 0.0
1.116AsnMet: 1.116 ± 0.0
0.372AsnAsn: 0.372 ± 0.0
0.744AsnPro: 0.744 ± 0.0
2.604AsnGln: 2.604 ± 0.0
3.72AsnArg: 3.72 ± 0.0
1.116AsnSer: 1.116 ± 0.0
3.348AsnThr: 3.348 ± 0.0
2.604AsnVal: 2.604 ± 0.0
0.372AsnTrp: 0.372 ± 0.0
1.86AsnTyr: 1.86 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.976ProAla: 2.976 ± 0.0
0.744ProCys: 0.744 ± 0.0
2.604ProAsp: 2.604 ± 0.0
3.72ProGlu: 3.72 ± 0.0
1.86ProPhe: 1.86 ± 0.0
3.348ProGly: 3.348 ± 0.0
2.604ProHis: 2.604 ± 0.0
1.488ProIle: 1.488 ± 0.0
1.488ProLys: 1.488 ± 0.0
3.348ProLeu: 3.348 ± 0.0
1.86ProMet: 1.86 ± 0.0
1.116ProAsn: 1.116 ± 0.0
0.744ProPro: 0.744 ± 0.0
2.976ProGln: 2.976 ± 0.0
2.604ProArg: 2.604 ± 0.0
0.744ProSer: 0.744 ± 0.0
2.604ProThr: 2.604 ± 0.0
5.58ProVal: 5.58 ± 0.0
0.372ProTrp: 0.372 ± 0.0
1.488ProTyr: 1.488 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
5.952GlnAla: 5.952 ± 0.0
0.372GlnCys: 0.372 ± 0.0
1.86GlnAsp: 1.86 ± 0.0
3.348GlnGlu: 3.348 ± 0.0
2.604GlnPhe: 2.604 ± 0.0
2.604GlnGly: 2.604 ± 0.0
0.372GlnHis: 0.372 ± 0.0
3.348GlnIle: 3.348 ± 0.0
1.86GlnLys: 1.86 ± 0.0
2.232GlnLeu: 2.232 ± 0.0
0.372GlnMet: 0.372 ± 0.0
2.232GlnAsn: 2.232 ± 0.0
2.604GlnPro: 2.604 ± 0.0
2.232GlnGln: 2.232 ± 0.0
2.232GlnArg: 2.232 ± 0.0
1.488GlnSer: 1.488 ± 0.0
4.092GlnThr: 4.092 ± 0.0
4.464GlnVal: 4.464 ± 0.0
1.488GlnTrp: 1.488 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.604ArgAla: 2.604 ± 0.0
0.0ArgCys: 0.0 ± 0.0
3.348ArgAsp: 3.348 ± 0.0
4.092ArgGlu: 4.092 ± 0.0
2.604ArgPhe: 2.604 ± 0.0
3.72ArgGly: 3.72 ± 0.0
0.744ArgHis: 0.744 ± 0.0
2.604ArgIle: 2.604 ± 0.0
2.604ArgLys: 2.604 ± 0.0
4.464ArgLeu: 4.464 ± 0.0
1.86ArgMet: 1.86 ± 0.0
0.744ArgAsn: 0.744 ± 0.0
1.86ArgPro: 1.86 ± 0.0
2.604ArgGln: 2.604 ± 0.0
5.208ArgArg: 5.208 ± 0.0
1.116ArgSer: 1.116 ± 0.0
4.464ArgThr: 4.464 ± 0.0
4.464ArgVal: 4.464 ± 0.0
1.86ArgTrp: 1.86 ± 0.0
2.604ArgTyr: 2.604 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
2.604SerAla: 2.604 ± 0.0
0.0SerCys: 0.0 ± 0.0
2.976SerAsp: 2.976 ± 0.0
1.116SerGlu: 1.116 ± 0.0
2.604SerPhe: 2.604 ± 0.0
4.092SerGly: 4.092 ± 0.0
0.372SerHis: 0.372 ± 0.0
3.348SerIle: 3.348 ± 0.0
2.604SerLys: 2.604 ± 0.0
3.348SerLeu: 3.348 ± 0.0
2.976SerMet: 2.976 ± 0.0
2.232SerAsn: 2.232 ± 0.0
2.232SerPro: 2.232 ± 0.0
3.348SerGln: 3.348 ± 0.0
2.604SerArg: 2.604 ± 0.0
2.604SerSer: 2.604 ± 0.0
3.72SerThr: 3.72 ± 0.0
5.952SerVal: 5.952 ± 0.0
1.488SerTrp: 1.488 ± 0.0
1.116SerTyr: 1.116 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.324ThrAla: 6.324 ± 0.0
1.488ThrCys: 1.488 ± 0.0
3.72ThrAsp: 3.72 ± 0.0
5.952ThrGlu: 5.952 ± 0.0
3.348ThrPhe: 3.348 ± 0.0
6.324ThrGly: 6.324 ± 0.0
2.604ThrHis: 2.604 ± 0.0
2.604ThrIle: 2.604 ± 0.0
2.604ThrLys: 2.604 ± 0.0
4.092ThrLeu: 4.092 ± 0.0
2.604ThrMet: 2.604 ± 0.0
2.604ThrAsn: 2.604 ± 0.0
2.232ThrPro: 2.232 ± 0.0
3.348ThrGln: 3.348 ± 0.0
3.348ThrArg: 3.348 ± 0.0
4.092ThrSer: 4.092 ± 0.0
6.696ThrThr: 6.696 ± 0.0
5.952ThrVal: 5.952 ± 0.0
1.116ThrTrp: 1.116 ± 0.0
2.604ThrTyr: 2.604 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.72ValAla: 3.72 ± 0.0
0.0ValCys: 0.0 ± 0.0
5.952ValAsp: 5.952 ± 0.0
5.952ValGlu: 5.952 ± 0.0
4.464ValPhe: 4.464 ± 0.0
8.929ValGly: 8.929 ± 0.0
2.604ValHis: 2.604 ± 0.0
4.464ValIle: 4.464 ± 0.0
5.208ValLys: 5.208 ± 0.0
6.324ValLeu: 6.324 ± 0.0
1.116ValMet: 1.116 ± 0.0
2.604ValAsn: 2.604 ± 0.0
5.208ValPro: 5.208 ± 0.0
2.976ValGln: 2.976 ± 0.0
4.836ValArg: 4.836 ± 0.0
6.324ValSer: 6.324 ± 0.0
7.44ValThr: 7.44 ± 0.0
6.696ValVal: 6.696 ± 0.0
0.744ValTrp: 0.744 ± 0.0
2.232ValTyr: 2.232 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.372TrpAla: 0.372 ± 0.0
0.372TrpCys: 0.372 ± 0.0
1.116TrpAsp: 1.116 ± 0.0
0.372TrpGlu: 0.372 ± 0.0
0.372TrpPhe: 0.372 ± 0.0
0.372TrpGly: 0.372 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.116TrpIle: 1.116 ± 0.0
2.604TrpLys: 2.604 ± 0.0
1.488TrpLeu: 1.488 ± 0.0
0.0TrpMet: 0.0 ± 0.0
1.86TrpAsn: 1.86 ± 0.0
0.372TrpPro: 0.372 ± 0.0
0.372TrpGln: 0.372 ± 0.0
0.744TrpArg: 0.744 ± 0.0
1.86TrpSer: 1.86 ± 0.0
1.488TrpThr: 1.488 ± 0.0
1.488TrpVal: 1.488 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.372TrpTyr: 0.372 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.836TyrAla: 4.836 ± 0.0
0.372TyrCys: 0.372 ± 0.0
0.0TyrAsp: 0.0 ± 0.0
1.488TyrGlu: 1.488 ± 0.0
2.232TyrPhe: 2.232 ± 0.0
1.116TyrGly: 1.116 ± 0.0
1.116TyrHis: 1.116 ± 0.0
2.232TyrIle: 2.232 ± 0.0
1.86TyrLys: 1.86 ± 0.0
2.232TyrLeu: 2.232 ± 0.0
0.372TyrMet: 0.372 ± 0.0
1.116TyrAsn: 1.116 ± 0.0
1.116TyrPro: 1.116 ± 0.0
1.488TyrGln: 1.488 ± 0.0
1.488TyrArg: 1.488 ± 0.0
2.604TyrSer: 2.604 ± 0.0
2.604TyrThr: 2.604 ± 0.0
2.604TyrVal: 2.604 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
1.86TyrTyr: 1.86 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2689 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski