CRESS virus sp. ctf7a5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; unclassified Cressdnaviricota; CRESS viruses

Average proteome isoelectric point is 7.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5Q2W902|A0A5Q2W902_9VIRU Putative capsid protein OS=CRESS virus sp. ctf7a5 OX=2656684 PE=4 SV=1
MM1 pKa = 7.93PSTNYY6 pKa = 10.35RR7 pKa = 11.84YY8 pKa = 10.01LSYY11 pKa = 10.69MNYY14 pKa = 10.39LGNKK18 pKa = 7.1WLWIKK23 pKa = 10.89HH24 pKa = 5.82FGDD27 pKa = 3.32TAAQLEE33 pKa = 4.4YY34 pKa = 10.78LDD36 pKa = 5.07DD37 pKa = 5.33HH38 pKa = 9.02IEE40 pKa = 4.03MEE42 pKa = 4.43EE43 pKa = 4.26TFPLTQVRR51 pKa = 11.84SRR53 pKa = 11.84GGNLINEE60 pKa = 4.67LRR62 pKa = 11.84PGSRR66 pKa = 11.84QNPIVIEE73 pKa = 4.07

Molecular weight: 8.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5Q2WA66|A0A5Q2WA66_9VIRU Replication-associated protein OS=CRESS virus sp. ctf7a5 OX=2656684 PE=4 SV=1
MM1 pKa = 7.73EE2 pKa = 4.46YY3 pKa = 10.68VGGASGGVIGYY14 pKa = 9.95ISGGPWGAYY23 pKa = 9.52SGASLGYY30 pKa = 9.97AAGKK34 pKa = 10.07NFTSNSQMEE43 pKa = 4.39RR44 pKa = 11.84GRR46 pKa = 11.84SRR48 pKa = 11.84VRR50 pKa = 11.84GLTPVRR56 pKa = 11.84VRR58 pKa = 11.84WGSTSRR64 pKa = 11.84EE65 pKa = 4.17RR66 pKa = 11.84KK67 pKa = 8.18WKK69 pKa = 8.82QHH71 pKa = 4.42NLRR74 pKa = 11.84AISRR78 pKa = 11.84QSRR81 pKa = 11.84SWSRR85 pKa = 11.84GRR87 pKa = 11.84EE88 pKa = 3.98LKK90 pKa = 8.83HH91 pKa = 4.45TRR93 pKa = 11.84RR94 pKa = 11.84RR95 pKa = 11.84LGFKK99 pKa = 10.11KK100 pKa = 9.39RR101 pKa = 11.84TVRR104 pKa = 11.84GGGLRR109 pKa = 11.84RR110 pKa = 11.84PVVKK114 pKa = 10.37YY115 pKa = 9.03PKK117 pKa = 9.3RR118 pKa = 11.84SKK120 pKa = 10.9VGFKK124 pKa = 9.93RR125 pKa = 11.84RR126 pKa = 11.84KK127 pKa = 8.89IRR129 pKa = 11.84ISKK132 pKa = 9.12KK133 pKa = 8.47FRR135 pKa = 11.84RR136 pKa = 11.84KK137 pKa = 8.77VMKK140 pKa = 9.99IVTGSKK146 pKa = 10.13YY147 pKa = 10.42KK148 pKa = 10.94GFFMWNTYY156 pKa = 8.61TNVTLATHH164 pKa = 6.48KK165 pKa = 9.74QTVHH169 pKa = 5.48QAQCGFNVQDD179 pKa = 4.49LQNPDD184 pKa = 3.75LGKK187 pKa = 7.48TTYY190 pKa = 10.32PLFSPSVFSAVAEE203 pKa = 4.3TLWGSKK209 pKa = 10.08AGPLSTATSYY219 pKa = 8.86VTGVGNNEE227 pKa = 3.78EE228 pKa = 4.36SNIFSFAKK236 pKa = 10.15IPVINSWVRR245 pKa = 11.84YY246 pKa = 8.63CMKK249 pKa = 10.75NNTSQVLEE257 pKa = 4.06VKK259 pKa = 10.2MFVCKK264 pKa = 10.25PKK266 pKa = 10.17VASFMYY272 pKa = 10.2HH273 pKa = 5.12GMNPAGQSTDD283 pKa = 3.18LAFVYY288 pKa = 10.51DD289 pKa = 6.01PILDD293 pKa = 3.76WEE295 pKa = 4.58KK296 pKa = 11.07AQSDD300 pKa = 4.61LYY302 pKa = 11.19ADD304 pKa = 3.71GVSRR308 pKa = 11.84YY309 pKa = 9.89DD310 pKa = 3.98VLLQKK315 pKa = 9.16QTLKK319 pKa = 10.97GRR321 pKa = 11.84LQTDD325 pKa = 5.31GISTMDD331 pKa = 3.19VDD333 pKa = 4.35PRR335 pKa = 11.84MFTWWNKK342 pKa = 6.99KK343 pKa = 7.34WKK345 pKa = 10.42ADD347 pKa = 3.9VIKK350 pKa = 9.93MKK352 pKa = 10.39IMPGQCIEE360 pKa = 4.95KK361 pKa = 9.79IVKK364 pKa = 10.08GPGDD368 pKa = 3.66FVVDD372 pKa = 3.61TFKK375 pKa = 11.03LWRR378 pKa = 11.84GALEE382 pKa = 4.32NNSSRR387 pKa = 11.84TVEE390 pKa = 4.07NLRR393 pKa = 11.84PAGWTFEE400 pKa = 4.75EE401 pKa = 3.91IQKK404 pKa = 9.28YY405 pKa = 8.56NRR407 pKa = 11.84YY408 pKa = 9.36VFWIVKK414 pKa = 9.25PEE416 pKa = 3.74IASVSTAVVGGVPSAIGVGRR436 pKa = 11.84IPNPEE441 pKa = 3.93GFTGAEE447 pKa = 4.16CFAVEE452 pKa = 3.55QRR454 pKa = 11.84MYY456 pKa = 11.12YY457 pKa = 10.57KK458 pKa = 10.78LALPEE463 pKa = 5.05KK464 pKa = 8.23MGRR467 pKa = 11.84WNEE470 pKa = 3.67VAYY473 pKa = 10.36QSNDD477 pKa = 3.24IISEE481 pKa = 3.97NQMRR485 pKa = 11.84DD486 pKa = 3.24VFFCQYY492 pKa = 10.49SKK494 pKa = 11.01QDD496 pKa = 3.25RR497 pKa = 11.84ANATGSIWQNTQTAGVDD514 pKa = 2.77IFTQIQQ520 pKa = 3.06

Molecular weight: 58.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

861

73

520

287.0

32.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.039 ± 0.798

1.045 ± 0.235

4.065 ± 0.527

5.343 ± 1.14

3.717 ± 0.752

8.246 ± 0.674

1.51 ± 0.481

4.878 ± 0.448

6.62 ± 1.205

6.852 ± 1.763

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.671 ± 0.433

4.53 ± 0.968

4.53 ± 0.421

3.949 ± 0.766

7.782 ± 0.376

6.736 ± 0.801

5.923 ± 0.198

7.549 ± 1.171

3.484 ± 0.443

4.53 ± 0.678
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski