Penicillium janczewskii chrysovirus 1
Average proteome isoelectric point is 5.92
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0S2KPC2|A0A0S2KPC2_9VIRU 80 kDa protein OS=Penicillium janczewskii chrysovirus 1 OX=1755792 PE=4 SV=1
MM1 pKa = 7.41 SNHH4 pKa = 6.65 RR5 pKa = 11.84 AVSWADD11 pKa = 3.22 EE12 pKa = 4.31 MEE14 pKa = 4.52 SEE16 pKa = 4.81 GTFSPPEE23 pKa = 3.47 IEE25 pKa = 4.53 YY26 pKa = 10.86 ANTSAGYY33 pKa = 9.63 LAGLAALGDD42 pKa = 3.65 ASYY45 pKa = 11.35 DD46 pKa = 3.77 EE47 pKa = 4.68 EE48 pKa = 5.48 DD49 pKa = 4.25 EE50 pKa = 4.98 EE51 pKa = 5.86 IAAPWLARR59 pKa = 11.84 RR60 pKa = 11.84 VGRR63 pKa = 11.84 TPTPRR68 pKa = 11.84 PLHH71 pKa = 5.69 EE72 pKa = 4.31 AVGDD76 pKa = 4.06 GEE78 pKa = 4.92 EE79 pKa = 3.95 EE80 pKa = 4.39 LPTYY84 pKa = 10.48 VHH86 pKa = 7.35 DD87 pKa = 4.56 PPSYY91 pKa = 10.97 EE92 pKa = 4.12 DD93 pKa = 4.84 DD94 pKa = 4.18 VYY96 pKa = 11.64 DD97 pKa = 5.9 DD98 pKa = 3.86 EE99 pKa = 5.94 AADD102 pKa = 3.68 VGTPILDD109 pKa = 3.57 ALYY112 pKa = 10.76 GLTLRR117 pKa = 11.84 RR118 pKa = 11.84 LDD120 pKa = 4.45 DD121 pKa = 3.87 NSAGAQEE128 pKa = 4.34 GTRR131 pKa = 11.84 LQRR134 pKa = 11.84 SQAAPPSCMVAQTPHH149 pKa = 6.67 DD150 pKa = 3.79 KK151 pKa = 8.85 WWQRR155 pKa = 11.84 EE156 pKa = 4.26 SYY158 pKa = 10.46 GQGTHH163 pKa = 6.45 ACLNSAPLHH172 pKa = 6.05 SGVPYY177 pKa = 10.2 GDD179 pKa = 3.73 SVRR182 pKa = 11.84 GANWTDD188 pKa = 3.05 SQLKK192 pKa = 9.9 VKK194 pKa = 10.41 ALSEE198 pKa = 3.96 QNRR201 pKa = 11.84 YY202 pKa = 9.34 HH203 pKa = 5.74 SAFRR207 pKa = 11.84 KK208 pKa = 9.7 GSEE211 pKa = 3.71 ARR213 pKa = 11.84 GAQDD217 pKa = 3.24 VNGADD222 pKa = 4.07 GVVTCWWKK230 pKa = 10.68 PNDD233 pKa = 3.26 TRR235 pKa = 11.84 IRR237 pKa = 11.84 LRR239 pKa = 11.84 TEE241 pKa = 4.96 FYY243 pKa = 10.43 FCQADD248 pKa = 3.98 AEE250 pKa = 4.53 CSVYY254 pKa = 10.72 VDD256 pKa = 3.1 WEE258 pKa = 4.13 RR259 pKa = 11.84 RR260 pKa = 11.84 DD261 pKa = 3.57 LRR263 pKa = 11.84 IVTDD267 pKa = 3.97 IYY269 pKa = 11.26 VSCSLDD275 pKa = 3.04 TMRR278 pKa = 11.84 ARR280 pKa = 11.84 RR281 pKa = 11.84 PDD283 pKa = 3.05 LAEE286 pKa = 3.96 RR287 pKa = 11.84 MNLVLSAFCVAVMEE301 pKa = 4.39 EE302 pKa = 4.52 DD303 pKa = 3.22 ISVEE307 pKa = 4.73 SVLQLDD313 pKa = 3.85 NSSLKK318 pKa = 10.7 DD319 pKa = 3.31 MKK321 pKa = 10.84 KK322 pKa = 10.19 LVVRR326 pKa = 11.84 TQHH329 pKa = 5.91 GSKK332 pKa = 9.7 LQKK335 pKa = 9.96 RR336 pKa = 11.84 SSTVAHH342 pKa = 6.57 ALSSTSEE349 pKa = 4.21 DD350 pKa = 3.27 LSGIPSEE357 pKa = 4.06 QHH359 pKa = 5.57 VDD361 pKa = 3.96 FSLWQRR367 pKa = 11.84 GRR369 pKa = 11.84 GVYY372 pKa = 10.03 YY373 pKa = 10.84 GRR375 pKa = 11.84 LRR377 pKa = 11.84 ASDD380 pKa = 3.93 VPPAQLVLLAANGGLSVSGSLLVVRR405 pKa = 11.84 AVGTNDD411 pKa = 2.69 ISLVCSSSVANYY423 pKa = 6.92 TFRR426 pKa = 11.84 PAMVAHH432 pKa = 6.57 KK433 pKa = 9.65 HH434 pKa = 5.29 APCVRR439 pKa = 11.84 DD440 pKa = 3.4 GLMSPIACVALHH452 pKa = 6.7 GDD454 pKa = 3.25 ASGVLSVTVDD464 pKa = 3.48 GEE466 pKa = 4.23 RR467 pKa = 11.84 TAVEE471 pKa = 4.57 TILTDD476 pKa = 3.92 AMSEE480 pKa = 3.88 PDD482 pKa = 3.74 RR483 pKa = 11.84 RR484 pKa = 11.84 PICTLDD490 pKa = 3.53 LNGTRR495 pKa = 11.84 TALRR499 pKa = 11.84 DD500 pKa = 3.41 LGLLCGYY507 pKa = 11.23 AMTEE511 pKa = 3.81 RR512 pKa = 11.84 TIDD515 pKa = 3.73 GEE517 pKa = 4.45 VKK519 pKa = 10.57 LFFSGHH525 pKa = 4.6 GRR527 pKa = 11.84 EE528 pKa = 3.78 FDD530 pKa = 3.04 IRR532 pKa = 11.84 LLYY535 pKa = 9.08 GTGTLTRR542 pKa = 11.84 WEE544 pKa = 4.11 NLLGVTEE551 pKa = 4.19 CMEE554 pKa = 4.44 VDD556 pKa = 3.86 DD557 pKa = 6.16 HH558 pKa = 7.0 IAPQTDD564 pKa = 3.69 SEE566 pKa = 4.98 IGLDD570 pKa = 3.42 WGASGLGRR578 pKa = 11.84 YY579 pKa = 7.77 MLAAYY584 pKa = 6.46 TQHH587 pKa = 6.79 GIIYY591 pKa = 8.85 GKK593 pKa = 10.41 KK594 pKa = 9.17 IMVAKK599 pKa = 10.33 RR600 pKa = 11.84 GPFSALSYY608 pKa = 10.23 DD609 pKa = 3.3 DD610 pKa = 3.25 RR611 pKa = 11.84 GRR613 pKa = 11.84 RR614 pKa = 11.84 RR615 pKa = 11.84 IIAPSAEE622 pKa = 4.09 VYY624 pKa = 10.78 NYY626 pKa = 10.45 VIDD629 pKa = 3.75 TEE631 pKa = 4.52 YY632 pKa = 11.01 INVKK636 pKa = 10.45 RR637 pKa = 11.84 GDD639 pKa = 3.64 EE640 pKa = 4.04 LLTYY644 pKa = 10.01 VYY646 pKa = 10.85 AVGIAKK652 pKa = 9.89 FSQGAYY658 pKa = 8.01 VGSWVAMDD666 pKa = 4.67 LEE668 pKa = 4.66 EE669 pKa = 4.21 NSKK672 pKa = 11.22 AFLSTLSAQEE682 pKa = 3.73 AKK684 pKa = 10.49 GYY686 pKa = 10.72 SDD688 pKa = 5.73 AINKK692 pKa = 8.84 LRR694 pKa = 11.84 EE695 pKa = 4.09 EE696 pKa = 4.26 EE697 pKa = 4.33 VPGVDD702 pKa = 3.05 MVEE705 pKa = 3.8 VLLAIRR711 pKa = 11.84 EE712 pKa = 4.1 RR713 pKa = 11.84 LLTNPNTRR721 pKa = 11.84 IYY723 pKa = 11.12 AKK725 pKa = 10.37 GRR727 pKa = 11.84 EE728 pKa = 4.15 AEE730 pKa = 4.06 QRR732 pKa = 11.84 LMTSSVSGGTRR743 pKa = 11.84 MFRR746 pKa = 11.84 AQAKK750 pKa = 9.7 AAGALIRR757 pKa = 11.84 EE758 pKa = 4.99 LGPLLPKK765 pKa = 10.15 YY766 pKa = 10.41 DD767 pKa = 3.47 SAARR771 pKa = 11.84 AVGWSTTHH779 pKa = 5.83 NPARR783 pKa = 11.84 EE784 pKa = 4.07 ATLFGYY790 pKa = 10.39 LAGLCAALPGEE801 pKa = 4.2 QLVGRR806 pKa = 11.84 DD807 pKa = 3.65 GLGTIMPSLGGTQMM821 pKa = 3.96
Molecular weight: 89.79 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.081
IPC2_protein 5.13
IPC_protein 5.118
Toseland 5.092
ProMoST 5.27
Dawson 5.13
Bjellqvist 5.245
Wikipedia 5.016
Rodwell 5.041
Grimsley 5.029
Solomon 5.13
Lehninger 5.092
Nozaki 5.258
DTASelect 5.423
Thurlkill 5.105
EMBOSS 5.08
Sillero 5.334
Patrickios 3.935
IPC_peptide 5.143
IPC2_peptide 5.334
IPC2.peptide.svr19 5.264
Protein with the highest isoelectric point:
>tr|A0A0S2KPC2|A0A0S2KPC2_9VIRU 80 kDa protein OS=Penicillium janczewskii chrysovirus 1 OX=1755792 PE=4 SV=1
MM1 pKa = 7.52 QSPTLGASYY10 pKa = 10.18 TSSPKK15 pKa = 10.58 LGGGTRR21 pKa = 11.84 LGRR24 pKa = 11.84 SMSNEE29 pKa = 3.7 EE30 pKa = 4.27 KK31 pKa = 10.69 RR32 pKa = 11.84 PLEE35 pKa = 4.14 WGALQAVVLPMCSGKK50 pKa = 8.49 STYY53 pKa = 10.51 ALRR56 pKa = 11.84 YY57 pKa = 8.82 GGYY60 pKa = 10.38 DD61 pKa = 3.01 IDD63 pKa = 4.2 DD64 pKa = 3.77 VVVNTGEE71 pKa = 4.24 LKK73 pKa = 10.09 IDD75 pKa = 4.07 DD76 pKa = 4.27 EE77 pKa = 4.81 CDD79 pKa = 3.03 RR80 pKa = 11.84 MLEE83 pKa = 4.03 LRR85 pKa = 11.84 EE86 pKa = 3.82 AAVWRR91 pKa = 11.84 GEE93 pKa = 3.82 RR94 pKa = 11.84 EE95 pKa = 3.91 GLHH98 pKa = 5.35 EE99 pKa = 4.95 HH100 pKa = 6.92 NEE102 pKa = 4.08 ILLKK106 pKa = 9.72 RR107 pKa = 11.84 ARR109 pKa = 11.84 RR110 pKa = 11.84 FLEE113 pKa = 3.79 ICSPDD118 pKa = 3.32 SNAPIVYY125 pKa = 9.52 IHH127 pKa = 5.82 TVEE130 pKa = 4.33 LADD133 pKa = 4.72 ALGLPILACIEE144 pKa = 4.13 LDD146 pKa = 3.45 EE147 pKa = 4.72 QIIRR151 pKa = 11.84 EE152 pKa = 4.17 TKK154 pKa = 9.14 RR155 pKa = 11.84 FKK157 pKa = 10.69 NASLSVQGHH166 pKa = 5.54 TLTIARR172 pKa = 11.84 EE173 pKa = 3.79 QAAANAVYY181 pKa = 9.8 LQRR184 pKa = 11.84 AGYY187 pKa = 7.21 GTPRR191 pKa = 11.84 RR192 pKa = 11.84 CRR194 pKa = 11.84 SFFEE198 pKa = 3.97 LDD200 pKa = 3.15 AYY202 pKa = 11.39 LDD204 pKa = 3.89 ANIGKK209 pKa = 9.16 HH210 pKa = 5.08 ISQNSEE216 pKa = 3.59 TKK218 pKa = 11.06 AMIEE222 pKa = 4.09 VLTSRR227 pKa = 11.84 MHH229 pKa = 5.94 EE230 pKa = 4.04 RR231 pKa = 11.84 EE232 pKa = 4.2 KK233 pKa = 11.24 LDD235 pKa = 3.57 ALYY238 pKa = 10.39 AYY240 pKa = 9.35 VKK242 pKa = 10.59 RR243 pKa = 11.84 SGQPDD248 pKa = 3.19 WAKK251 pKa = 10.89 AVASRR256 pKa = 11.84 NLVHH260 pKa = 7.22 ALGDD264 pKa = 3.71 AAPQEE269 pKa = 4.39 AHH271 pKa = 6.35 HH272 pKa = 6.32 HH273 pKa = 6.17 HH274 pKa = 6.39 NHH276 pKa = 6.78 PGWARR281 pKa = 11.84 YY282 pKa = 8.04 IHH284 pKa = 6.54 AVYY287 pKa = 10.61 SRR289 pKa = 11.84 VPRR292 pKa = 11.84 SVPGDD297 pKa = 2.95 WHH299 pKa = 6.21 IRR301 pKa = 11.84 SITEE305 pKa = 3.71 DD306 pKa = 3.51 YY307 pKa = 10.81 VRR309 pKa = 11.84 EE310 pKa = 4.08 RR311 pKa = 11.84 FPMGPGSSSFALFDD325 pKa = 3.21 ISSWLRR331 pKa = 11.84 HH332 pKa = 4.93 TPEE335 pKa = 4.28 SAWLEE340 pKa = 3.93 GWHH343 pKa = 6.81 WARR346 pKa = 11.84 QLLSHH351 pKa = 6.73 PQGATYY357 pKa = 10.23 EE358 pKa = 4.15 RR359 pKa = 11.84 LAATIVMGDD368 pKa = 3.4 ALSYY372 pKa = 10.97 AKK374 pKa = 9.72 PQYY377 pKa = 11.19 GEE379 pKa = 3.71 ICSRR383 pKa = 11.84 LPLGLLNTEE392 pKa = 4.24 EE393 pKa = 4.43 FSVVTQHH400 pKa = 6.27 AHH402 pKa = 5.33 ALVRR406 pKa = 11.84 AGCNYY411 pKa = 10.46 LGRR414 pKa = 11.84 KK415 pKa = 9.07 LPTADD420 pKa = 4.36 LALFTYY426 pKa = 7.34 WHH428 pKa = 6.71 CLVGRR433 pKa = 11.84 HH434 pKa = 5.69 LGKK437 pKa = 10.43 LDD439 pKa = 3.45 VEE441 pKa = 4.66 KK442 pKa = 10.48 EE443 pKa = 3.77 ISDD446 pKa = 3.8 RR447 pKa = 11.84 TSVRR451 pKa = 11.84 APKK454 pKa = 10.17 FWYY457 pKa = 10.1 FPDD460 pKa = 3.54 GRR462 pKa = 11.84 KK463 pKa = 9.69 SSSEE467 pKa = 3.34 FSRR470 pKa = 11.84 RR471 pKa = 11.84 LRR473 pKa = 11.84 GAISRR478 pKa = 11.84 SYY480 pKa = 9.36 QHH482 pKa = 6.71 LGVVAKK488 pKa = 10.7 DD489 pKa = 3.33 KK490 pKa = 10.94 LLTMEE495 pKa = 4.2 EE496 pKa = 4.07 DD497 pKa = 3.32 MRR499 pKa = 11.84 TLEE502 pKa = 3.83 SFLRR506 pKa = 11.84 IRR508 pKa = 11.84 KK509 pKa = 8.74 SWVKK513 pKa = 10.21 PGSATGAPKK522 pKa = 10.01 TDD524 pKa = 3.89 LYY526 pKa = 10.74 LTATVEE532 pKa = 4.17 KK533 pKa = 10.08 EE534 pKa = 3.95 ALAKK538 pKa = 10.39 EE539 pKa = 4.39 LGAEE543 pKa = 4.2 LLDD546 pKa = 3.86 ATHH549 pKa = 6.95 LVIRR553 pKa = 11.84 KK554 pKa = 8.05 MRR556 pKa = 11.84 LNKK559 pKa = 10.02 AATFEE564 pKa = 4.37 FPEE567 pKa = 4.8 FPQLVQEE574 pKa = 4.71 ALDD577 pKa = 3.77 KK578 pKa = 11.31 FEE580 pKa = 4.5 PTSFTRR586 pKa = 11.84 YY587 pKa = 4.6 FTKK590 pKa = 11.04 YY591 pKa = 10.01 EE592 pKa = 3.94 VGKK595 pKa = 11.0 LEE597 pKa = 4.22 GRR599 pKa = 11.84 ALFPANMMHH608 pKa = 6.79 YY609 pKa = 9.88 IVTSYY614 pKa = 11.26 ILFLAEE620 pKa = 5.16 KK621 pKa = 9.13 GGSMPNTRR629 pKa = 11.84 LNAPADD635 pKa = 3.88 QQLLDD640 pKa = 3.13 HH641 pKa = 6.72 WLWHH645 pKa = 5.63 DD646 pKa = 3.23 TRR648 pKa = 11.84 DD649 pKa = 3.82 YY650 pKa = 11.76 VFGLMLDD657 pKa = 3.57 YY658 pKa = 11.58 ANFNEE663 pKa = 4.15 QHH665 pKa = 6.54 EE666 pKa = 4.57 IEE668 pKa = 4.53 HH669 pKa = 5.57 MQMVIGEE676 pKa = 4.07 LQYY679 pKa = 11.25 YY680 pKa = 8.25 YY681 pKa = 10.95 SKK683 pKa = 11.12 HH684 pKa = 6.67 DD685 pKa = 4.28 LLSDD689 pKa = 3.87 SMRR692 pKa = 11.84 QAFKK696 pKa = 10.59 WVMDD700 pKa = 3.8 SFDD703 pKa = 5.08 AIVFEE708 pKa = 4.97 VDD710 pKa = 3.3 GKK712 pKa = 8.97 GHH714 pKa = 6.67 KK715 pKa = 9.73 FNHH718 pKa = 6.38 GLLSGWRR725 pKa = 11.84 CTSWVNSILNVAYY738 pKa = 9.57 MDD740 pKa = 4.46 VIAQQVHH747 pKa = 4.55 QMTGIRR753 pKa = 11.84 VLTSAQTGGDD763 pKa = 3.46 DD764 pKa = 4.04 VAATTASLYY773 pKa = 10.78 DD774 pKa = 3.51 AVVVLRR780 pKa = 11.84 VGEE783 pKa = 3.96 AMGFEE788 pKa = 4.7 FKK790 pKa = 10.55 AIKK793 pKa = 10.07 QLMGSKK799 pKa = 9.98 YY800 pKa = 9.76 VEE802 pKa = 4.97 FYY804 pKa = 11.13 RR805 pKa = 11.84 LFVSSDD811 pKa = 3.13 GVRR814 pKa = 11.84 GSLCRR819 pKa = 11.84 MLGSAVSGQWSNSVIAKK836 pKa = 9.58 FVEE839 pKa = 4.49 PASKK843 pKa = 10.46 LNSVVEE849 pKa = 4.29 IARR852 pKa = 11.84 KK853 pKa = 9.39 AGRR856 pKa = 11.84 RR857 pKa = 11.84 CEE859 pKa = 4.04 LNMSIMEE866 pKa = 4.36 KK867 pKa = 8.14 MTLCAFEE874 pKa = 3.48 KK875 pKa = 9.72 WARR878 pKa = 11.84 HH879 pKa = 5.63 DD880 pKa = 4.71 DD881 pKa = 3.54 IEE883 pKa = 4.18 IARR886 pKa = 11.84 EE887 pKa = 4.12 LIHH890 pKa = 6.2 GTVATGGLGVPTPAGDD906 pKa = 3.59 VYY908 pKa = 10.95 EE909 pKa = 4.66 LEE911 pKa = 4.39 QAGVPARR918 pKa = 11.84 ADD920 pKa = 3.28 SLEE923 pKa = 4.54 IIGLPHH929 pKa = 7.35 DD930 pKa = 4.64 ASDD933 pKa = 3.63 VSAEE937 pKa = 4.2 RR938 pKa = 11.84 ITTAVRR944 pKa = 11.84 DD945 pKa = 3.98 LLGKK949 pKa = 8.82 EE950 pKa = 4.06 AAMKK954 pKa = 10.6 SSVLAEE960 pKa = 3.92 KK961 pKa = 10.05 MSRR964 pKa = 11.84 SVFIGAAATARR975 pKa = 11.84 GPRR978 pKa = 11.84 LAQRR982 pKa = 11.84 LQRR985 pKa = 11.84 RR986 pKa = 11.84 VDD988 pKa = 3.41 YY989 pKa = 9.76 TRR991 pKa = 11.84 KK992 pKa = 9.53 PRR994 pKa = 11.84 ITRR997 pKa = 11.84 IKK999 pKa = 9.64 RR1000 pKa = 11.84 VRR1002 pKa = 11.84 PEE1004 pKa = 3.79 DD1005 pKa = 3.04 VRR1007 pKa = 11.84 ARR1009 pKa = 11.84 HH1010 pKa = 4.96 NTMLRR1015 pKa = 11.84 HH1016 pKa = 6.26 RR1017 pKa = 11.84 LDD1019 pKa = 3.15 EE1020 pKa = 4.48 HH1021 pKa = 7.0 KK1022 pKa = 10.75 EE1023 pKa = 3.88 LIRR1026 pKa = 11.84 SYY1028 pKa = 10.54 TRR1030 pKa = 11.84 AKK1032 pKa = 10.76 NRR1034 pKa = 11.84 FDD1036 pKa = 3.66 FLRR1039 pKa = 11.84 AGTVDD1044 pKa = 4.26 SYY1046 pKa = 12.2 AEE1048 pKa = 4.02 PLAMAVAKK1056 pKa = 10.7 DD1057 pKa = 3.83 NVGVDD1062 pKa = 3.6 PLKK1065 pKa = 10.53 LIRR1068 pKa = 11.84 WRR1070 pKa = 11.84 EE1071 pKa = 3.67 RR1072 pKa = 11.84 NTLYY1076 pKa = 11.17 GCATYY1081 pKa = 10.19 MLTEE1085 pKa = 4.99 DD1086 pKa = 4.61 YY1087 pKa = 10.48 YY1088 pKa = 11.68 DD1089 pKa = 3.6 AVITLAVIEE1098 pKa = 4.86 SKK1100 pKa = 11.04 DD1101 pKa = 3.44 GDD1103 pKa = 3.79 EE1104 pKa = 5.42 DD1105 pKa = 3.88 EE1106 pKa = 4.72 VSRR1109 pKa = 11.84 IAAGYY1114 pKa = 10.32 AKK1116 pKa = 10.2 GLSEE1120 pKa = 4.69 EE1121 pKa = 5.43 GYY1123 pKa = 8.76 TFYY1126 pKa = 11.49
Molecular weight: 126.92 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.816
IPC2_protein 7.102
IPC_protein 7.044
Toseland 7.059
ProMoST 7.644
Dawson 7.658
Bjellqvist 7.878
Wikipedia 7.6
Rodwell 7.673
Grimsley 7.205
Solomon 7.688
Lehninger 7.702
Nozaki 8.053
DTASelect 7.863
Thurlkill 7.907
EMBOSS 7.936
Sillero 8.097
Patrickios 4.38
IPC_peptide 7.688
IPC2_peptide 7.278
IPC2.peptide.svr19 7.107
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
3404
687
1126
851.0
93.82
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
10.693 ± 0.408
1.204 ± 0.262
5.905 ± 0.312
6.58 ± 0.29
2.321 ± 0.375
7.785 ± 0.414
2.732 ± 0.296
3.378 ± 0.446
3.496 ± 0.517
10.047 ± 0.363
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.85 ± 0.188
2.82 ± 0.173
4.289 ± 0.361
3.055 ± 0.236
7.579 ± 0.187
7.55 ± 0.692
5.229 ± 0.17
7.256 ± 0.274
1.528 ± 0.143
3.702 ± 0.236
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here