Salanga virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Salanga phlebovirus

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U5XLH5|U5XLH5_9VIRU Replicase OS=Salanga virus OX=1416745 PE=4 SV=1
MM1 pKa = 8.01DD2 pKa = 5.81RR3 pKa = 11.84YY4 pKa = 10.07LHH6 pKa = 5.99NRR8 pKa = 11.84AIVHH12 pKa = 6.5RR13 pKa = 11.84LHH15 pKa = 6.91GSSNLPVVTFKK26 pKa = 11.2VIEE29 pKa = 4.31DD30 pKa = 5.08DD31 pKa = 3.34IDD33 pKa = 3.44EE34 pKa = 4.64HH35 pKa = 7.76VAVHH39 pKa = 5.13QCVEE43 pKa = 4.5VVLHH47 pKa = 4.95SHH49 pKa = 6.48RR50 pKa = 11.84LSRR53 pKa = 11.84AEE55 pKa = 3.81GHH57 pKa = 4.86SLKK60 pKa = 10.43WFLEE64 pKa = 4.02RR65 pKa = 11.84GLFPARR71 pKa = 11.84SGDD74 pKa = 4.47LIWSSCITRR83 pKa = 11.84IEE85 pKa = 4.13PQDD88 pKa = 3.91LNSYY92 pKa = 10.38LYY94 pKa = 11.03GFAALPRR101 pKa = 11.84EE102 pKa = 4.49DD103 pKa = 5.11FNCLQLRR110 pKa = 11.84NVRR113 pKa = 11.84KK114 pKa = 9.79ALEE117 pKa = 4.2WPTGQLSFEE126 pKa = 4.23FFDD129 pKa = 5.08LEE131 pKa = 4.56FPGKK135 pKa = 9.62YY136 pKa = 8.13VWAFEE141 pKa = 3.88NMRR144 pKa = 11.84RR145 pKa = 11.84TIQLLSMMSSSDD157 pKa = 3.33QVEE160 pKa = 5.18DD161 pKa = 4.81IICDD165 pKa = 3.37AYY167 pKa = 11.23DD168 pKa = 3.48CVLRR172 pKa = 11.84AGSDD176 pKa = 2.99LGLAHH181 pKa = 6.43STFPGNNIVYY191 pKa = 7.03EE192 pKa = 4.02VCYY195 pKa = 10.31IQLLKK200 pKa = 10.69AVQAYY205 pKa = 7.92STDD208 pKa = 3.22IQQVSGFPDD217 pKa = 3.14NAVTIFLKK225 pKa = 10.79DD226 pKa = 2.98IMPYY230 pKa = 10.08VRR232 pKa = 11.84DD233 pKa = 3.54RR234 pKa = 11.84FPGVRR239 pKa = 11.84EE240 pKa = 3.95PMSNPLPEE248 pKa = 4.84PSEE251 pKa = 4.02HH252 pKa = 6.39QLNVWALPDD261 pKa = 3.48EE262 pKa = 5.12GIEE265 pKa = 4.04EE266 pKa = 5.41DD267 pKa = 3.87IDD269 pKa = 3.56

Molecular weight: 30.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U5XJM5|U5XJM5_9VIRU Nonstructural protein OS=Salanga virus OX=1416745 PE=4 SV=1
MM1 pKa = 8.27DD2 pKa = 4.04YY3 pKa = 11.53AKK5 pKa = 10.37IALDD9 pKa = 3.65FAGEE13 pKa = 4.53GISQVEE19 pKa = 3.82IAKK22 pKa = 9.16WVEE25 pKa = 3.56DD26 pKa = 3.74FAYY29 pKa = 10.39QGFDD33 pKa = 2.8AKK35 pKa = 10.47RR36 pKa = 11.84VVEE39 pKa = 4.1LVQTRR44 pKa = 11.84GSGRR48 pKa = 11.84NWKK51 pKa = 9.73QDD53 pKa = 3.35VAKK56 pKa = 9.71MIVIALTRR64 pKa = 11.84GNKK67 pKa = 7.49IAKK70 pKa = 7.94MKK72 pKa = 10.82QKK74 pKa = 10.2MSDD77 pKa = 3.12KK78 pKa = 10.45GKK80 pKa = 10.57EE81 pKa = 4.0SLTEE85 pKa = 3.82LEE87 pKa = 3.94RR88 pKa = 11.84VYY90 pKa = 10.13MLKK93 pKa = 10.38SGNPGRR99 pKa = 11.84DD100 pKa = 3.4DD101 pKa = 3.55LTLSRR106 pKa = 11.84IAVAFAPWTVGALNHH121 pKa = 6.99LDD123 pKa = 2.83GHH125 pKa = 6.53LPVNGKK131 pKa = 10.19DD132 pKa = 3.3MDD134 pKa = 3.93EE135 pKa = 4.2HH136 pKa = 5.37VQRR139 pKa = 11.84YY140 pKa = 6.1PRR142 pKa = 11.84CMMHH146 pKa = 6.86PAFGSLIDD154 pKa = 3.87RR155 pKa = 11.84NLPEE159 pKa = 4.12VTVSQLINAHH169 pKa = 6.72CIFLDD174 pKa = 3.26KK175 pKa = 10.05FARR178 pKa = 11.84VINPNLRR185 pKa = 11.84GKK187 pKa = 8.37TKK189 pKa = 10.52QEE191 pKa = 3.73VAKK194 pKa = 10.7SYY196 pKa = 7.4EE197 pKa = 4.18QPLKK201 pKa = 10.79AAVSSTFFSLEE212 pKa = 3.68QKK214 pKa = 10.61RR215 pKa = 11.84GVLKK219 pKa = 10.82NLGLIDD225 pKa = 4.25EE226 pKa = 4.51NLKK229 pKa = 8.52VTEE232 pKa = 4.23VVKK235 pKa = 10.47RR236 pKa = 11.84ASDD239 pKa = 3.75FWTQAFF245 pKa = 3.82

Molecular weight: 27.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

4035

245

2123

1008.8

114.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.527 ± 0.414

2.677 ± 0.741

6.245 ± 0.351

6.295 ± 0.327

4.411 ± 0.133

5.651 ± 0.252

2.354 ± 0.151

6.072 ± 0.369

6.221 ± 0.367

9.021 ± 0.406

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.47 ± 0.572

4.04 ± 0.27

3.866 ± 0.175

3.371 ± 0.274

5.75 ± 0.167

8.848 ± 0.69

5.353 ± 0.461

6.667 ± 0.391

1.388 ± 0.115

2.776 ± 0.183
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski