Capybara microvirus Cap1_SP_99

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7P6|A0A4P8W7P6_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_99 OX=2584802 PE=4 SV=1
MM1 pKa = 7.79ILRR4 pKa = 11.84KK5 pKa = 9.69GVNDD9 pKa = 3.61TQTRR13 pKa = 11.84PIGTTVYY20 pKa = 10.06PPTLIVRR27 pKa = 11.84TYY29 pKa = 9.83VNEE32 pKa = 3.86EE33 pKa = 4.15GEE35 pKa = 4.3EE36 pKa = 4.36VSCVEE41 pKa = 4.55SLDD44 pKa = 5.1DD45 pKa = 5.86IPFEE49 pKa = 4.35DD50 pKa = 5.06ANVGDD55 pKa = 4.16YY56 pKa = 10.71TLDD59 pKa = 3.53ALFKK63 pKa = 10.97AGINPRR69 pKa = 11.84SVNFNSTVSNVDD81 pKa = 2.93LHH83 pKa = 7.28DD84 pKa = 4.62ALNEE88 pKa = 3.89INNLKK93 pKa = 10.35VEE95 pKa = 4.2

Molecular weight: 10.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4D4|A0A4P8W4D4_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_99 OX=2584802 PE=3 SV=1
MM1 pKa = 7.71ISDD4 pKa = 4.66SYY6 pKa = 10.71ICSSIPLRR14 pKa = 11.84SYY16 pKa = 11.35YY17 pKa = 10.38YY18 pKa = 10.67DD19 pKa = 3.49CFRR22 pKa = 11.84DD23 pKa = 3.56KK24 pKa = 11.18SIIRR28 pKa = 11.84VARR31 pKa = 11.84RR32 pKa = 11.84EE33 pKa = 3.97NFGTSQLAQKK43 pKa = 10.3EE44 pKa = 4.37YY45 pKa = 10.01TLRR48 pKa = 11.84LYY50 pKa = 11.04SEE52 pKa = 4.95LKK54 pKa = 8.98RR55 pKa = 11.84TYY57 pKa = 9.76ALHH60 pKa = 5.53GRR62 pKa = 11.84VYY64 pKa = 10.43FYY66 pKa = 10.62TLTYY70 pKa = 10.94SDD72 pKa = 4.09VNLPKK77 pKa = 10.68YY78 pKa = 10.42KK79 pKa = 10.48GVSCVDD85 pKa = 3.55YY86 pKa = 10.71NHH88 pKa = 6.42IRR90 pKa = 11.84AMFHH94 pKa = 6.87DD95 pKa = 5.29FLYY98 pKa = 9.39EE99 pKa = 3.74QCEE102 pKa = 3.97RR103 pKa = 11.84AHH105 pKa = 6.2CAKK108 pKa = 10.07IKK110 pKa = 10.02YY111 pKa = 9.52FVVTEE116 pKa = 3.98YY117 pKa = 11.6GDD119 pKa = 3.84GKK121 pKa = 10.68GSRR124 pKa = 11.84GKK126 pKa = 10.72GNNPHH131 pKa = 5.87FHH133 pKa = 6.73VIFMFQPHH141 pKa = 6.57ANVGKK146 pKa = 9.82HH147 pKa = 3.7LTGRR151 pKa = 11.84KK152 pKa = 8.77KK153 pKa = 10.62SYY155 pKa = 10.27MNIFFPPTPHH165 pKa = 7.1QMLQYY170 pKa = 9.7MRR172 pKa = 11.84YY173 pKa = 7.91YY174 pKa = 8.84WQGNKK179 pKa = 7.5ITNVYY184 pKa = 10.08HH185 pKa = 7.4DD186 pKa = 3.95GSFDD190 pKa = 3.53VEE192 pKa = 4.96SYY194 pKa = 11.0KK195 pKa = 10.41RR196 pKa = 11.84WQDD199 pKa = 3.19LKK201 pKa = 11.32YY202 pKa = 10.78GFVKK206 pKa = 10.46PGCLKK211 pKa = 10.36GARR214 pKa = 11.84NGAACGEE221 pKa = 4.15VLPDD225 pKa = 4.27NIDD228 pKa = 3.28ALGYY232 pKa = 6.09VTKK235 pKa = 10.88YY236 pKa = 6.8VTKK239 pKa = 8.83DD240 pKa = 2.86THH242 pKa = 5.36KK243 pKa = 10.63RR244 pKa = 11.84RR245 pKa = 11.84VEE247 pKa = 3.75TEE249 pKa = 3.55IYY251 pKa = 9.59RR252 pKa = 11.84RR253 pKa = 11.84IYY255 pKa = 9.63GEE257 pKa = 4.65SYY259 pKa = 10.58FDD261 pKa = 3.94CANNLDD267 pKa = 3.75LVYY270 pKa = 10.44RR271 pKa = 11.84CLRR274 pKa = 11.84FSVEE278 pKa = 4.07EE279 pKa = 4.01KK280 pKa = 10.44NKK282 pKa = 10.05EE283 pKa = 3.84FASEE287 pKa = 4.27YY288 pKa = 10.58EE289 pKa = 4.33DD290 pKa = 3.38IKK292 pKa = 11.57GDD294 pKa = 3.58VNYY297 pKa = 10.77DD298 pKa = 3.78GLSSIYY304 pKa = 10.81DD305 pKa = 3.52NLADD309 pKa = 3.65VGKK312 pKa = 10.95LEE314 pKa = 4.43FSDD317 pKa = 4.93SITEE321 pKa = 4.28KK322 pKa = 10.88LCSAYY327 pKa = 10.59DD328 pKa = 3.79NYY330 pKa = 11.35LHH332 pKa = 6.59SCSSRR337 pKa = 11.84NVSPYY342 pKa = 10.34FFTYY346 pKa = 10.56CMNKK350 pKa = 9.46GVRR353 pKa = 11.84LLFPSLRR360 pKa = 11.84DD361 pKa = 3.5VQLNRR366 pKa = 11.84IKK368 pKa = 10.91HH369 pKa = 5.61LFNKK373 pKa = 8.96VFHH376 pKa = 6.9SMLEE380 pKa = 4.2EE381 pKa = 4.01YY382 pKa = 10.71QNEE385 pKa = 4.23CVKK388 pKa = 10.75YY389 pKa = 9.21YY390 pKa = 10.61RR391 pKa = 11.84NRR393 pKa = 11.84YY394 pKa = 5.1STKK397 pKa = 9.91VRR399 pKa = 11.84ISQHH403 pKa = 5.73FGDD406 pKa = 5.21SIVEE410 pKa = 4.1DD411 pKa = 4.36FRR413 pKa = 11.84EE414 pKa = 3.82KK415 pKa = 10.81ALQNRR420 pKa = 11.84EE421 pKa = 3.97LVYY424 pKa = 11.02LLNINGKK431 pKa = 8.95VNQKK435 pKa = 9.48YY436 pKa = 8.83YY437 pKa = 10.5CGSYY441 pKa = 10.05YY442 pKa = 10.11YY443 pKa = 10.43RR444 pKa = 11.84KK445 pKa = 10.12LFYY448 pKa = 10.61KK449 pKa = 9.88VVKK452 pKa = 10.47GHH454 pKa = 7.06DD455 pKa = 3.56GSNKK459 pKa = 9.7YY460 pKa = 9.86VLNDD464 pKa = 3.44FGIEE468 pKa = 4.01YY469 pKa = 10.74KK470 pKa = 10.25MKK472 pKa = 10.0TLDD475 pKa = 4.61DD476 pKa = 4.52NIEE479 pKa = 4.03RR480 pKa = 11.84QFAKK484 pKa = 10.05YY485 pKa = 10.48KK486 pKa = 10.26RR487 pKa = 11.84MLVSVYY493 pKa = 10.54NDD495 pKa = 3.22CNLYY499 pKa = 9.28STFNDD504 pKa = 2.71WRR506 pKa = 11.84KK507 pKa = 10.52KK508 pKa = 9.69YY509 pKa = 10.47GYY511 pKa = 10.32DD512 pKa = 3.39YY513 pKa = 10.82GISFAGSFFSTLSSIGFSEE532 pKa = 3.88ITEE535 pKa = 4.45DD536 pKa = 4.81DD537 pKa = 4.12LLKK540 pKa = 10.81AAIFKK545 pKa = 10.07IVYY548 pKa = 8.75RR549 pKa = 11.84DD550 pKa = 3.48RR551 pKa = 11.84YY552 pKa = 7.43TDD554 pKa = 3.42CVGINHH560 pKa = 6.01VDD562 pKa = 3.13YY563 pKa = 8.24FTRR566 pKa = 11.84YY567 pKa = 7.76RR568 pKa = 11.84DD569 pKa = 3.62YY570 pKa = 10.65YY571 pKa = 8.6EE572 pKa = 5.3SYY574 pKa = 10.37IIPHH578 pKa = 6.04LVEE581 pKa = 4.85NYY583 pKa = 10.58SSLTSLYY590 pKa = 9.85DD591 pKa = 3.3INMKK595 pKa = 7.73TVCAYY600 pKa = 9.19PLSDD604 pKa = 3.5NVVLSPYY611 pKa = 10.95SKK613 pKa = 10.99LCDD616 pKa = 3.52LFEE619 pKa = 4.83ALNDD623 pKa = 3.8YY624 pKa = 10.33IVYY627 pKa = 10.34LRR629 pKa = 11.84DD630 pKa = 3.62IQWSNDD636 pKa = 3.09YY637 pKa = 10.57EE638 pKa = 4.23EE639 pKa = 4.86RR640 pKa = 11.84SRR642 pKa = 11.84LRR644 pKa = 11.84KK645 pKa = 8.48LHH647 pKa = 6.09KK648 pKa = 9.66RR649 pKa = 11.84SEE651 pKa = 4.13VEE653 pKa = 3.92EE654 pKa = 3.96YY655 pKa = 10.9LVANRR660 pKa = 11.84YY661 pKa = 7.76LL662 pKa = 3.59

Molecular weight: 78.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1703

95

662

425.8

48.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.166 ± 1.419

1.644 ± 0.531

6.166 ± 0.322

4.815 ± 0.607

4.521 ± 0.448

6.459 ± 0.746

1.82 ± 0.516

5.578 ± 0.324

5.872 ± 0.97

7.575 ± 0.345

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.642 ± 0.487

6.753 ± 0.562

3.23 ± 0.627

3.699 ± 0.869

4.756 ± 0.886

8.28 ± 0.711

5.52 ± 0.929

6.577 ± 0.918

0.998 ± 0.203

6.929 ± 1.744
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski