Chlamydiales bacterium SCGC AG-110-M15

Taxonomy: cellular organisms; Bacteria; PVC group; Chlamydiae; Chlamydiia; Chlamydiales; unclassified Chalmydiales

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 847 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A212KU77|A0A212KU77_9CHLA Translation initiation factor IF-3 OS=Chlamydiales bacterium SCGC AG-110-M15 OX=1871324 GN=infC PE=3 SV=1
MM1 pKa = 8.1DD2 pKa = 5.73CMDD5 pKa = 5.47CMDD8 pKa = 5.57CMDD11 pKa = 5.57CMDD14 pKa = 5.57CMDD17 pKa = 5.57CMDD20 pKa = 5.57CMDD23 pKa = 5.57CMDD26 pKa = 5.57CMDD29 pKa = 5.57CMDD32 pKa = 5.57CMDD35 pKa = 5.57CMDD38 pKa = 5.52CMDD41 pKa = 5.38CMEE44 pKa = 4.96TDD46 pKa = 3.65LKK48 pKa = 11.39FEE50 pKa = 4.02ISEE53 pKa = 4.14QEE55 pKa = 3.85KK56 pKa = 8.96TPEE59 pKa = 3.64KK60 pKa = 10.78SRR62 pKa = 11.84VLRR65 pKa = 11.84KK66 pKa = 9.76ISVFCC71 pKa = 4.8

Molecular weight: 8.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A212KTN1|A0A212KTN1_9CHLA Uncharacterized protein OS=Chlamydiales bacterium SCGC AG-110-M15 OX=1871324 GN=SCG7109_AK_00130 PE=4 SV=1
MM1 pKa = 7.56WNICGEE7 pKa = 4.03QSVPSSLASDD17 pKa = 3.84RR18 pKa = 11.84VYY20 pKa = 10.39NTSNLFEE27 pKa = 4.81YY28 pKa = 9.84GHH30 pKa = 6.52LMKK33 pKa = 10.72AAFHH37 pKa = 6.61PVHH40 pKa = 5.59QVKK43 pKa = 10.33PGGGLFSVALSVALRR58 pKa = 11.84PPVFHH63 pKa = 6.57WHH65 pKa = 6.26PLLRR69 pKa = 11.84RR70 pKa = 11.84PDD72 pKa = 4.15FPPLLPINRR81 pKa = 11.84QKK83 pKa = 10.88RR84 pKa = 11.84RR85 pKa = 3.34

Molecular weight: 9.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

847

0

847

277359

29

5397

327.5

36.81

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.144 ± 0.078

1.149 ± 0.042

5.836 ± 0.14

7.345 ± 0.137

4.497 ± 0.062

6.465 ± 0.099

2.444 ± 0.049

6.569 ± 0.081

6.653 ± 0.145

10.454 ± 0.099

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.344 ± 0.056

4.223 ± 0.073

3.867 ± 0.056

3.753 ± 0.068

5.011 ± 0.085

7.214 ± 0.083

4.908 ± 0.126

5.922 ± 0.086

1.004 ± 0.028

3.173 ± 0.065
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski