Morganella phage MmP1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Minipunavirus; Morganella virus MmP1

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 49 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D1FNQ4|D1FNQ4_9CAUD Uncharacterized protein OS=Morganella phage MmP1 OX=526118 GN=MmP1_gp02 PE=4 SV=1
MM1 pKa = 6.63TTFNEE6 pKa = 4.87LYY8 pKa = 10.71ASAKK12 pKa = 9.75EE13 pKa = 3.97DD14 pKa = 3.34LEE16 pKa = 4.05AAIRR20 pKa = 11.84EE21 pKa = 4.2LHH23 pKa = 5.75VTDD26 pKa = 4.81TDD28 pKa = 4.21DD29 pKa = 5.31DD30 pKa = 4.86DD31 pKa = 4.43IRR33 pKa = 11.84DD34 pKa = 4.46RR35 pKa = 11.84IHH37 pKa = 7.25EE38 pKa = 4.29IADD41 pKa = 3.74SNVPIYY47 pKa = 10.91NGDD50 pKa = 3.45VFAVFADD57 pKa = 3.97GGISYY62 pKa = 10.79EE63 pKa = 4.16MDD65 pKa = 3.62DD66 pKa = 3.42SGLIEE71 pKa = 4.5GVTDD75 pKa = 3.26VLHH78 pKa = 6.55ILRR81 pKa = 11.84VRR83 pKa = 11.84IYY85 pKa = 10.75EE86 pKa = 3.93EE87 pKa = 5.55LINCLYY93 pKa = 11.01GDD95 pKa = 5.23LEE97 pKa = 4.91DD98 pKa = 5.28CVTAYY103 pKa = 10.75VEE105 pKa = 4.11EE106 pKa = 5.67LEE108 pKa = 5.9DD109 pKa = 3.56EE110 pKa = 5.07AEE112 pKa = 4.2TCGYY116 pKa = 10.94GDD118 pKa = 5.22DD119 pKa = 4.1EE120 pKa = 4.52

Molecular weight: 13.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D1FNQ5|D1FNQ5_9CAUD DNA-directed RNA polymerase OS=Morganella phage MmP1 OX=526118 GN=MmP1_gp09 PE=3 SV=1
MM1 pKa = 7.59KK2 pKa = 10.58LNRR5 pKa = 11.84LRR7 pKa = 11.84KK8 pKa = 8.85NMRR11 pKa = 11.84YY12 pKa = 7.58TIAYY16 pKa = 8.05NGSFKK21 pKa = 10.66RR22 pKa = 11.84FKK24 pKa = 10.76KK25 pKa = 10.29NLRR28 pKa = 11.84ASPDD32 pKa = 3.24KK33 pKa = 10.89GLSRR37 pKa = 11.84IPARR41 pKa = 11.84KK42 pKa = 9.35LKK44 pKa = 10.87AEE46 pKa = 4.08WEE48 pKa = 4.17WAVFEE53 pKa = 4.4MTCRR57 pKa = 11.84QQRR60 pKa = 11.84EE61 pKa = 4.11DD62 pKa = 3.34ARR64 pKa = 11.84LITFGLLYY72 pKa = 10.78GIDD75 pKa = 3.94YY76 pKa = 10.67AGEE79 pKa = 3.89VHH81 pKa = 7.12

Molecular weight: 9.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

49

0

49

11891

35

1312

242.7

27.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.923 ± 0.528

0.883 ± 0.139

6.425 ± 0.235

7.367 ± 0.353

3.557 ± 0.19

7.291 ± 0.327

1.783 ± 0.181

5.307 ± 0.211

6.955 ± 0.309

7.964 ± 0.328

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.969 ± 0.191

4.676 ± 0.23

3.692 ± 0.211

3.667 ± 0.321

5.391 ± 0.197

5.904 ± 0.328

5.735 ± 0.273

6.358 ± 0.239

1.413 ± 0.197

3.742 ± 0.156
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski