Beihai sobemo-like virus 11

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KEC8|A0A1L3KEC8_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 11 OX=1922682 PE=4 SV=1
MM1 pKa = 7.38SVFAQSLGEE10 pKa = 3.88RR11 pKa = 11.84VMEE14 pKa = 4.64LFGTFAGACYY24 pKa = 10.0HH25 pKa = 5.81SARR28 pKa = 11.84KK29 pKa = 8.38FAEE32 pKa = 4.11AADD35 pKa = 3.91YY36 pKa = 10.12QLPSLASIIGYY47 pKa = 9.62VLMGLTFCVAQSLWSWMSPSATKK70 pKa = 9.87TFKK73 pKa = 10.75QFLGACKK80 pKa = 10.22ALWKK84 pKa = 10.45YY85 pKa = 10.48RR86 pKa = 11.84ADD88 pKa = 3.93RR89 pKa = 11.84MQKK92 pKa = 9.94PITGTVVGPVHH103 pKa = 7.41GYY105 pKa = 6.84FTHH108 pKa = 6.74GAEE111 pKa = 3.84HH112 pKa = 7.29YY113 pKa = 8.38YY114 pKa = 10.67RR115 pKa = 11.84CVKK118 pKa = 9.55TSKK121 pKa = 10.61LYY123 pKa = 10.08IVSPGRR129 pKa = 11.84GRR131 pKa = 11.84FYY133 pKa = 10.29IDD135 pKa = 3.05KK136 pKa = 10.62NGEE139 pKa = 3.88EE140 pKa = 4.52KK141 pKa = 11.32YY142 pKa = 10.05EE143 pKa = 4.01VCDD146 pKa = 3.7YY147 pKa = 11.22VHH149 pKa = 6.99EE150 pKa = 4.58LVQSSGIEE158 pKa = 3.86AEE160 pKa = 4.28ANVHH164 pKa = 5.88NGEE167 pKa = 4.23PALPTPALDD176 pKa = 3.44KK177 pKa = 11.21CVVTLAFKK185 pKa = 10.69DD186 pKa = 3.92SNGDD190 pKa = 3.09IHH192 pKa = 7.26NLGHH196 pKa = 5.24GHH198 pKa = 7.21RR199 pKa = 11.84MGDD202 pKa = 3.54YY203 pKa = 10.53LVTNAHH209 pKa = 6.01VNDD212 pKa = 4.17AGLARR217 pKa = 11.84SEE219 pKa = 4.53DD220 pKa = 3.7GQIVFTKK227 pKa = 10.22DD228 pKa = 2.9NQKK231 pKa = 10.35FYY233 pKa = 10.4PAGEE237 pKa = 4.35FIYY240 pKa = 8.77FTKK243 pKa = 10.51NYY245 pKa = 9.35EE246 pKa = 4.09KK247 pKa = 10.59ATGNDD252 pKa = 2.79LGAYY256 pKa = 9.08KK257 pKa = 10.34ISLGTWAASGVTSFQPSNYY276 pKa = 8.91NPQGEE281 pKa = 4.24GRR283 pKa = 11.84IYY285 pKa = 9.79LTAYY289 pKa = 10.42DD290 pKa = 4.07DD291 pKa = 4.12VRR293 pKa = 11.84GKK295 pKa = 9.36TMMAKK300 pKa = 10.3GYY302 pKa = 9.86LHH304 pKa = 6.58NQTKK308 pKa = 9.81EE309 pKa = 3.75DD310 pKa = 4.12CKK312 pKa = 11.05AGLIPHH318 pKa = 6.25TAITRR323 pKa = 11.84AGYY326 pKa = 10.14SGTPIFLMKK335 pKa = 10.06GQRR338 pKa = 11.84RR339 pKa = 11.84TMVGIHH345 pKa = 6.2CGGRR349 pKa = 11.84IDD351 pKa = 4.58GKK353 pKa = 11.23GNYY356 pKa = 8.79GCSIYY361 pKa = 10.88EE362 pKa = 3.87LFQFRR367 pKa = 11.84RR368 pKa = 11.84QLGLEE373 pKa = 3.94PKK375 pKa = 10.2IPLICEE381 pKa = 4.15AKK383 pKa = 10.56YY384 pKa = 10.49ISPPTKK390 pKa = 9.61DD391 pKa = 3.09RR392 pKa = 11.84QYY394 pKa = 11.81DD395 pKa = 3.55RR396 pKa = 11.84YY397 pKa = 10.75DD398 pKa = 3.25QEE400 pKa = 4.2TPEE403 pKa = 3.9QRR405 pKa = 11.84EE406 pKa = 3.78EE407 pKa = 4.21RR408 pKa = 11.84KK409 pKa = 10.42DD410 pKa = 3.5RR411 pKa = 11.84EE412 pKa = 4.4AMEE415 pKa = 4.27KK416 pKa = 10.37AAEE419 pKa = 3.98EE420 pKa = 4.16EE421 pKa = 4.02IRR423 pKa = 11.84EE424 pKa = 4.15NLHH427 pKa = 6.58GEE429 pKa = 4.09ALVPEE434 pKa = 4.57AALDD438 pKa = 4.0GPTWVEE444 pKa = 3.67LGVNTGFEE452 pKa = 3.84IDD454 pKa = 3.26MDD456 pKa = 4.08EE457 pKa = 4.25THH459 pKa = 6.25SQSVGISDD467 pKa = 4.62LGSVSDD473 pKa = 4.57LGLSEE478 pKa = 6.43DD479 pKa = 4.18EE480 pKa = 4.32VQLAAEE486 pKa = 4.0QLPRR490 pKa = 11.84ANLGLNEE497 pKa = 4.66DD498 pKa = 4.46ALQEE502 pKa = 3.89LHH504 pKa = 6.52QDD506 pKa = 2.86QDD508 pKa = 3.43EE509 pKa = 4.34RR510 pKa = 11.84RR511 pKa = 11.84TAAVEE516 pKa = 3.79RR517 pKa = 11.84LRR519 pKa = 11.84TYY521 pKa = 11.23AEE523 pKa = 3.8QQYY526 pKa = 9.58EE527 pKa = 4.57QIPEE531 pKa = 3.98PAPPQEE537 pKa = 4.09QEE539 pKa = 4.07VMSAADD545 pKa = 4.49KK546 pKa = 11.18YY547 pKa = 11.7DD548 pKa = 5.69LIPDD552 pKa = 5.34PIGEE556 pKa = 4.38PEE558 pKa = 4.14FEE560 pKa = 5.04DD561 pKa = 5.25GEE563 pKa = 4.29IEE565 pKa = 4.0EE566 pKa = 4.72PMVHH570 pKa = 6.57FPASGQPVVLGPQVSRR586 pKa = 11.84EE587 pKa = 3.8EE588 pKa = 4.19KK589 pKa = 10.13EE590 pKa = 3.7RR591 pKa = 11.84GEE593 pKa = 3.96RR594 pKa = 11.84TFASRR599 pKa = 11.84ASMPLWVKK607 pKa = 10.54GFLGVGLLQAANVVSPTGKK626 pKa = 7.89TRR628 pKa = 11.84EE629 pKa = 4.14VTDD632 pKa = 3.79EE633 pKa = 3.93QVKK636 pKa = 10.8DD637 pKa = 3.74LLRR640 pKa = 11.84CRR642 pKa = 11.84PQDD645 pKa = 3.25LAAARR650 pKa = 11.84KK651 pKa = 9.38LDD653 pKa = 3.97PQSLLNSTPYY663 pKa = 10.09EE664 pKa = 4.11VYY666 pKa = 10.22RR667 pKa = 11.84SYY669 pKa = 11.2LGCGDD674 pKa = 4.55VEE676 pKa = 4.17WTPDD680 pKa = 3.23GEE682 pKa = 4.96KK683 pKa = 10.45IKK685 pKa = 10.79DD686 pKa = 3.67DD687 pKa = 3.68QDD689 pKa = 3.3NVLAARR695 pKa = 11.84VGKK698 pKa = 10.39SRR700 pKa = 11.84MFSRR704 pKa = 11.84SSNKK708 pKa = 9.46SHH710 pKa = 7.42LPDD713 pKa = 3.69KK714 pKa = 9.92YY715 pKa = 10.75KK716 pKa = 10.86KK717 pKa = 10.46VVADD721 pKa = 4.8LKK723 pKa = 10.98LGPQQGFKK731 pKa = 10.56DD732 pKa = 4.01YY733 pKa = 11.43VMPPTGPEE741 pKa = 3.64AVLGSLRR748 pKa = 11.84TQLKK752 pKa = 7.73KK753 pKa = 9.48TSVEE757 pKa = 3.79PWPKK761 pKa = 10.57EE762 pKa = 3.45FLEE765 pKa = 4.74RR766 pKa = 11.84DD767 pKa = 3.62GGDD770 pKa = 3.05HH771 pKa = 6.98LRR773 pKa = 11.84NEE775 pKa = 4.38LHH777 pKa = 7.5DD778 pKa = 4.27EE779 pKa = 4.07ASKK782 pKa = 11.48YY783 pKa = 9.27PLAYY787 pKa = 9.57EE788 pKa = 4.21AGFLNVHH795 pKa = 6.41DD796 pKa = 4.79FVVKK800 pKa = 10.29LAKK803 pKa = 10.5EE804 pKa = 3.87FDD806 pKa = 3.92GTKK809 pKa = 10.04SAGWSQLYY817 pKa = 10.02RR818 pKa = 11.84PGNKK822 pKa = 9.49AVWQTEE828 pKa = 3.92EE829 pKa = 4.03GLALASYY836 pKa = 7.7MVRR839 pKa = 11.84CRR841 pKa = 11.84LLLRR845 pKa = 11.84MAWGAEE851 pKa = 3.93AMSKK855 pKa = 9.64MSPEE859 pKa = 3.8QMFQNGLSDD868 pKa = 3.78PKK870 pKa = 9.69VASVKK875 pKa = 10.32VEE877 pKa = 3.67PHH879 pKa = 6.6DD880 pKa = 3.99PEE882 pKa = 4.81KK883 pKa = 10.77AAEE886 pKa = 4.01ARR888 pKa = 11.84WRR890 pKa = 11.84VIWGASMIDD899 pKa = 3.73VLTQGVTCRR908 pKa = 11.84MQDD911 pKa = 2.97KK912 pKa = 10.99LDD914 pKa = 3.55ILSYY918 pKa = 10.85QDD920 pKa = 3.13GTGKK924 pKa = 10.01HH925 pKa = 5.08SQGAGLGHH933 pKa = 6.68HH934 pKa = 7.26PEE936 pKa = 5.37GIQMIGKK943 pKa = 9.25HH944 pKa = 5.27IEE946 pKa = 3.76RR947 pKa = 11.84LQASGGDD954 pKa = 3.99LFDD957 pKa = 5.64ADD959 pKa = 3.65ASGWDD964 pKa = 3.64LSVKK968 pKa = 10.04RR969 pKa = 11.84DD970 pKa = 4.03SILMDD975 pKa = 3.29AEE977 pKa = 3.94RR978 pKa = 11.84RR979 pKa = 11.84IRR981 pKa = 11.84CYY983 pKa = 9.72VGPYY987 pKa = 10.07HH988 pKa = 7.13EE989 pKa = 4.68VFKK992 pKa = 10.98DD993 pKa = 3.6LQLADD998 pKa = 3.85AMTNSAHH1005 pKa = 5.71MLVFGEE1011 pKa = 4.33YY1012 pKa = 10.5LFSIYY1017 pKa = 10.37LAGITASGILPTTAQNSFMRR1037 pKa = 11.84AFIARR1042 pKa = 11.84LVGILATFVAGDD1054 pKa = 3.94DD1055 pKa = 3.64LMGAGRR1061 pKa = 11.84FDD1063 pKa = 3.67PEE1065 pKa = 4.25YY1066 pKa = 10.18EE1067 pKa = 4.01RR1068 pKa = 11.84KK1069 pKa = 9.63FGPRR1073 pKa = 11.84EE1074 pKa = 3.54KK1075 pKa = 10.29RR1076 pKa = 11.84ITYY1079 pKa = 9.48RR1080 pKa = 11.84DD1081 pKa = 3.44PGEE1084 pKa = 4.55PIEE1087 pKa = 4.17FTSFLFSKK1095 pKa = 11.01VGDD1098 pKa = 3.24TWIADD1103 pKa = 3.48FTNLGKK1109 pKa = 10.27SCAKK1113 pKa = 10.27LAFSPKK1119 pKa = 9.98SIQPEE1124 pKa = 3.87QLGGVLYY1131 pKa = 10.55HH1132 pKa = 7.01LRR1134 pKa = 11.84DD1135 pKa = 3.79NPAKK1139 pKa = 10.26ADD1141 pKa = 3.82LFRR1144 pKa = 11.84EE1145 pKa = 3.59ICYY1148 pKa = 10.36RR1149 pKa = 11.84MEE1151 pKa = 3.89WPIDD1155 pKa = 3.58QAVAGPDD1162 pKa = 3.81GDD1164 pKa = 4.51CDD1166 pKa = 3.46

Molecular weight:
129.91 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KEC8|A0A1L3KEC8_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 11 OX=1922682 PE=4 SV=1
MM1 pKa = 7.7EE2 pKa = 4.35NQFTRR7 pKa = 11.84KK8 pKa = 8.2QQAALQKK15 pKa = 10.32AKK17 pKa = 10.15TPAARR22 pKa = 11.84EE23 pKa = 4.05ALKK26 pKa = 10.69KK27 pKa = 10.74LYY29 pKa = 8.74TAQRR33 pKa = 11.84AGTARR38 pKa = 11.84PKK40 pKa = 10.56AQAKK44 pKa = 7.99PRR46 pKa = 11.84PRR48 pKa = 11.84SHH50 pKa = 7.72AIPNFLDD57 pKa = 3.75PMCPFPMPTLASEE70 pKa = 4.7GRR72 pKa = 11.84ALPHH76 pKa = 6.43TGLVSSDD83 pKa = 3.37FTVDD87 pKa = 3.37TTNTTLLLVANTGHH101 pKa = 6.5SGTVAFSVKK110 pKa = 9.89LDD112 pKa = 3.48ASGGVVAGSIEE123 pKa = 4.86TYY125 pKa = 9.98TIPTLSVSDD134 pKa = 4.15HH135 pKa = 6.51NGGPTTSRR143 pKa = 11.84SMKK146 pKa = 10.26LSVSVVNCTNNYY158 pKa = 8.93KK159 pKa = 10.5RR160 pKa = 11.84GGRR163 pKa = 11.84VTYY166 pKa = 10.26INSSQRR172 pKa = 11.84LPPRR176 pKa = 11.84NLDD179 pKa = 3.18LSTEE183 pKa = 4.16YY184 pKa = 11.2ASIVSGIKK192 pKa = 9.43SSPYY196 pKa = 8.67RR197 pKa = 11.84RR198 pKa = 11.84RR199 pKa = 11.84INGEE203 pKa = 3.87DD204 pKa = 3.28LVKK207 pKa = 10.21PKK209 pKa = 10.56HH210 pKa = 6.36LITFPVDD217 pKa = 2.94NKK219 pKa = 10.29VYY221 pKa = 10.41HH222 pKa = 6.64SYY224 pKa = 11.43DD225 pKa = 3.16GFRR228 pKa = 11.84GTITAGDD235 pKa = 3.99FLSYY239 pKa = 10.44MLTPGDD245 pKa = 3.59NVATKK250 pKa = 10.32DD251 pKa = 3.61AEE253 pKa = 4.04ISPRR257 pKa = 11.84PMSTVAWIFDD267 pKa = 4.07PAPDD271 pKa = 3.44EE272 pKa = 3.95QAYY275 pKa = 10.52SFTVRR280 pKa = 11.84ASFYY284 pKa = 9.93TRR286 pKa = 11.84WPLTSVPGQTMHH298 pKa = 6.83NVPTAPAAVLNAVVDD313 pKa = 3.82KK314 pKa = 11.57AEE316 pKa = 3.95AHH318 pKa = 6.25GSDD321 pKa = 4.38LVEE324 pKa = 4.21LAAGGAAVAMGSRR337 pKa = 11.84ISGVARR343 pKa = 11.84SIGSGVQAVGSGIGQALGRR362 pKa = 11.84AFTSPYY368 pKa = 10.19GEE370 pKa = 3.96AVAAGGGEE378 pKa = 4.19GGLLAGMEE386 pKa = 4.58GLSSLQALQLPLLAA400 pKa = 5.95

Molecular weight:
42.06 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1566

400

1166

783.0

85.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.387 ± 1.143

1.277 ± 0.376

5.875 ± 0.907

6.513 ± 1.578

3.64 ± 0.309

9.004 ± 0.24

2.363 ± 0.175

3.895 ± 0.191

5.3 ± 0.629

8.365 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.554 ± 0.147

2.874 ± 0.424

5.811 ± 0.575

4.215 ± 0.466

5.556 ± 0.027

6.705 ± 1.231

5.492 ± 1.334

6.258 ± 0.601

1.149 ± 0.314

3.768 ± 0.371

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski