Deerpox virus (strain Mule deer/United States/W-848-83/1983) (DPV)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Cervidpoxvirus; Mule deerpox virus

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 165 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q08FY7|Q08FY7_DPV83 CC chemokine receptor-like protein OS=Deerpox virus (strain Mule deer/United States/W-848-83/1983) OX=305674 GN=DpV83gp013 PE=4 SV=1
MM1 pKa = 8.22DD2 pKa = 4.41MMSKK6 pKa = 10.16EE7 pKa = 4.74CDD9 pKa = 3.34FMDD12 pKa = 3.36QVDD15 pKa = 4.06YY16 pKa = 10.84MFSKK20 pKa = 10.77YY21 pKa = 10.6SNPLFYY27 pKa = 10.87YY28 pKa = 9.99IEE30 pKa = 4.94SDD32 pKa = 4.14DD33 pKa = 3.97EE34 pKa = 4.52EE35 pKa = 5.02GVKK38 pKa = 10.17KK39 pKa = 9.98WINLSNEE46 pKa = 3.93NNDD49 pKa = 3.37FNEE52 pKa = 4.19PPILSCLDD60 pKa = 3.22KK61 pKa = 11.08EE62 pKa = 4.56YY63 pKa = 11.41VNKK66 pKa = 10.62NILKK70 pKa = 10.41LLIEE74 pKa = 4.48NGANVNCIIPGDD86 pKa = 4.2NISLLSYY93 pKa = 10.53YY94 pKa = 9.5LTYY97 pKa = 10.93NKK99 pKa = 10.2NISEE103 pKa = 4.95EE104 pKa = 3.83ILKK107 pKa = 10.31ILIEE111 pKa = 4.33ANANINEE118 pKa = 4.13INSDD122 pKa = 3.84GKK124 pKa = 10.54NLLHH128 pKa = 6.97VYY130 pKa = 10.33LDD132 pKa = 4.01NISINVEE139 pKa = 3.39IMKK142 pKa = 9.91FLIEE146 pKa = 4.27MGNSPFNKK154 pKa = 9.72DD155 pKa = 2.66KK156 pKa = 10.86HH157 pKa = 6.31QNNILYY163 pKa = 8.73TYY165 pKa = 11.22LMYY168 pKa = 10.58HH169 pKa = 7.58DD170 pKa = 4.94DD171 pKa = 3.66QKK173 pKa = 11.36IVDD176 pKa = 4.27FLLSIGLDD184 pKa = 3.49YY185 pKa = 11.25EE186 pKa = 4.34EE187 pKa = 5.16CNNMGLNCIDD197 pKa = 3.03ISKK200 pKa = 10.19NRR202 pKa = 11.84DD203 pKa = 2.87IIFNKK208 pKa = 10.28DD209 pKa = 2.59

Molecular weight: 24.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q08FV8|Q08FV8_DPV83 DNA-directed RNA polymerase 30 kDa polypeptide OS=Deerpox virus (strain Mule deer/United States/W-848-83/1983) OX=305674 GN=DpV83gp043 PE=3 SV=1
MM1 pKa = 7.51ALSAKK6 pKa = 9.8EE7 pKa = 3.78IFSAISLTLLALLMIISGGALAFKK31 pKa = 10.54SLAPHH36 pKa = 7.17RR37 pKa = 11.84IVSMRR42 pKa = 11.84SATFNRR48 pKa = 11.84VISILEE54 pKa = 3.78YY55 pKa = 10.45LAILIFIPGTIALYY69 pKa = 10.05SAYY72 pKa = 9.43IKK74 pKa = 10.8KK75 pKa = 10.35LFSS78 pKa = 3.42

Molecular weight: 8.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

159

6

165

51100

53

1953

309.7

35.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.771 ± 0.119

2.008 ± 0.085

6.162 ± 0.112

5.611 ± 0.145

5.29 ± 0.136

3.595 ± 0.117

1.722 ± 0.06

11.614 ± 0.22

9.088 ± 0.159

9.112 ± 0.149

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.493 ± 0.073

8.384 ± 0.172

2.947 ± 0.1

2.022 ± 0.07

3.184 ± 0.101

7.706 ± 0.151

5.341 ± 0.141

4.806 ± 0.123

0.654 ± 0.04

5.491 ± 0.131
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski