Myxoma virus (strain Lausanne) (MYXV)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Leporipoxvirus; Myxoma virus

Average proteome isoelectric point is 6.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 158 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9Q8H7|Q9Q8H7_MYXVL M124R OS=Myxoma virus (strain Lausanne) OX=31530 GN=m124R PE=4 SV=1
MM1 pKa = 7.35IVVAYY6 pKa = 8.95MGLLFSFCSLSAYY19 pKa = 10.17LLSVYY24 pKa = 9.97KK25 pKa = 10.45HH26 pKa = 5.6QIKK29 pKa = 10.25KK30 pKa = 10.04CLHH33 pKa = 6.35RR34 pKa = 11.84PTKK37 pKa = 8.99RR38 pKa = 11.84TKK40 pKa = 10.34CIRR43 pKa = 11.84LNSITYY49 pKa = 8.92SADD52 pKa = 4.05DD53 pKa = 3.63IVHH56 pKa = 6.42QIPEE60 pKa = 4.45TVEE63 pKa = 3.84SDD65 pKa = 4.71DD66 pKa = 4.49EE67 pKa = 5.21FDD69 pKa = 4.8SEE71 pKa = 4.29WSSDD75 pKa = 3.49EE76 pKa = 4.72DD77 pKa = 4.08DD78 pKa = 4.5GEE80 pKa = 4.43VYY82 pKa = 10.7EE83 pKa = 4.92NYY85 pKa = 9.58TSKK88 pKa = 11.1SEE90 pKa = 4.17NNFVARR96 pKa = 11.84TDD98 pKa = 3.7DD99 pKa = 4.08DD100 pKa = 4.05VAVDD104 pKa = 3.6VLVEE108 pKa = 4.37TEE110 pKa = 5.86DD111 pKa = 3.73EE112 pKa = 4.65PNWDD116 pKa = 3.35PTIYY120 pKa = 10.5DD121 pKa = 3.7ANTSNVYY128 pKa = 9.73EE129 pKa = 4.46IPDD132 pKa = 4.19DD133 pKa = 4.31GEE135 pKa = 4.45SFDD138 pKa = 5.82DD139 pKa = 3.82VQIDD143 pKa = 4.09RR144 pKa = 11.84NVSDD148 pKa = 4.21KK149 pKa = 11.26KK150 pKa = 9.63YY151 pKa = 8.56FTYY154 pKa = 8.78FTEE157 pKa = 4.53TAVSS161 pKa = 3.4

Molecular weight: 18.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9Q8F7|Q9Q8F7_MYXVL M147R OS=Myxoma virus (strain Lausanne) OX=31530 GN=m147R PE=4 SV=1
MM1 pKa = 7.16TVIKK5 pKa = 10.0PSSRR9 pKa = 11.84PRR11 pKa = 11.84PRR13 pKa = 11.84KK14 pKa = 9.51NKK16 pKa = 8.96NIKK19 pKa = 9.03VNTYY23 pKa = 7.63RR24 pKa = 11.84TSAMDD29 pKa = 3.96LSPGSVHH36 pKa = 6.8EE37 pKa = 4.75GIVYY41 pKa = 10.08FKK43 pKa = 11.21DD44 pKa = 3.99GIFKK48 pKa = 10.5VRR50 pKa = 11.84LLGYY54 pKa = 9.5EE55 pKa = 3.81GHH57 pKa = 6.38EE58 pKa = 4.83CILLDD63 pKa = 3.78YY64 pKa = 11.13LNYY67 pKa = 10.59RR68 pKa = 11.84QDD70 pKa = 3.32TLDD73 pKa = 3.44RR74 pKa = 11.84LKK76 pKa = 10.71EE77 pKa = 3.94RR78 pKa = 11.84LVGRR82 pKa = 11.84VIKK85 pKa = 9.83TRR87 pKa = 11.84VVRR90 pKa = 11.84ADD92 pKa = 3.26GLYY95 pKa = 9.44VDD97 pKa = 4.96LRR99 pKa = 11.84RR100 pKa = 11.84FFF102 pKa = 4.71

Molecular weight: 11.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

158

0

158

48407

32

2000

306.4

35.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.526 ± 0.119

2.148 ± 0.106

6.171 ± 0.116

5.572 ± 0.125

4.838 ± 0.138

4.156 ± 0.126

2.26 ± 0.074

7.613 ± 0.181

7.429 ± 0.204

9.057 ± 0.161

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.357 ± 0.074

5.782 ± 0.138

3.568 ± 0.115

2.21 ± 0.083

4.706 ± 0.15

7.098 ± 0.148

6.683 ± 0.144

7.801 ± 0.161

0.727 ± 0.056

5.293 ± 0.137
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski