Hibiscus bacilliform virus GD1
Average proteome isoelectric point is 7.4
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|W6D5G1|W6D5G1_9VIRU Uncharacterized protein OS=Hibiscus bacilliform virus GD1 OX=1459800 PE=4 SV=1
MM1 pKa = 7.23 STTTTQTVPPVTRR14 pKa = 11.84 NATRR18 pKa = 11.84 RR19 pKa = 11.84 QQGEE23 pKa = 4.07 RR24 pKa = 11.84 EE25 pKa = 4.11 TPLFEE30 pKa = 5.05 DD31 pKa = 4.12 QIRR34 pKa = 11.84 DD35 pKa = 3.46 YY36 pKa = 11.39 RR37 pKa = 11.84 NSQRR41 pKa = 11.84 RR42 pKa = 11.84 AYY44 pKa = 5.91 TTQRR48 pKa = 11.84 AVRR51 pKa = 11.84 RR52 pKa = 11.84 LRR54 pKa = 11.84 RR55 pKa = 11.84 RR56 pKa = 11.84 ITGRR60 pKa = 11.84 QPYY63 pKa = 9.59 QEE65 pKa = 4.21 TLEE68 pKa = 4.36 QEE70 pKa = 4.26 VDD72 pKa = 3.62 PQADD76 pKa = 3.79 LQMSMQEE83 pKa = 4.04 RR84 pKa = 11.84 ARR86 pKa = 11.84 LVPAEE91 pKa = 3.72 VLYY94 pKa = 10.57 RR95 pKa = 11.84 SRR97 pKa = 11.84 RR98 pKa = 11.84 DD99 pKa = 3.7 TIHH102 pKa = 6.41 HH103 pKa = 6.2 RR104 pKa = 11.84 VYY106 pKa = 10.59 SHH108 pKa = 7.12 RR109 pKa = 11.84 SEE111 pKa = 4.19 EE112 pKa = 5.06 AILCTDD118 pKa = 3.95 GNQVDD123 pKa = 3.89 RR124 pKa = 11.84 TFIQPEE130 pKa = 4.18 SMEE133 pKa = 4.12 ALQRR137 pKa = 11.84 TGISFIHH144 pKa = 6.99 IGIMQVRR151 pKa = 11.84 LQILHH156 pKa = 6.17 RR157 pKa = 11.84 QNEE160 pKa = 4.26 GTMALVVFRR169 pKa = 11.84 DD170 pKa = 3.86 TRR172 pKa = 11.84 WNGDD176 pKa = 3.11 QSIFATMEE184 pKa = 3.48 VDD186 pKa = 3.4 LTEE189 pKa = 4.29 GRR191 pKa = 11.84 QIIYY195 pKa = 8.92 VVPDD199 pKa = 3.1 TMMTIGDD206 pKa = 4.47 FARR209 pKa = 11.84 NIQISILTRR218 pKa = 11.84 GYY220 pKa = 11.2 SNWQNGEE227 pKa = 3.87 ANLLVTRR234 pKa = 11.84 GIVGRR239 pKa = 11.84 LSNTPNVAFAYY250 pKa = 9.67 EE251 pKa = 4.08 IGNVTDD257 pKa = 3.86 YY258 pKa = 9.88 LTSQGVQAIAGRR270 pKa = 11.84 RR271 pKa = 11.84 YY272 pKa = 10.5 DD273 pKa = 3.93 SRR275 pKa = 11.84 EE276 pKa = 3.8 LQNQQWILRR285 pKa = 11.84 PPQVEE290 pKa = 4.5 RR291 pKa = 11.84 LPQAPKK297 pKa = 10.86 NVDD300 pKa = 2.86 TRR302 pKa = 11.84 NLIDD306 pKa = 3.82 GSISLRR312 pKa = 11.84 FRR314 pKa = 11.84 DD315 pKa = 3.93 YY316 pKa = 11.03 ATTSTPEE323 pKa = 3.8 LPSYY327 pKa = 10.8 NEE329 pKa = 3.46 QDD331 pKa = 3.76 EE332 pKa = 4.81 EE333 pKa = 4.35 VDD335 pKa = 3.45 PDD337 pKa = 3.6 EE338 pKa = 4.59 EE339 pKa = 4.05 QLMEE343 pKa = 4.19 HH344 pKa = 5.92 VVAAFVEE351 pKa = 4.59 EE352 pKa = 4.26 EE353 pKa = 4.44 PKK355 pKa = 10.71 EE356 pKa = 3.84 IWDD359 pKa = 3.85 TLGQPSGKK367 pKa = 9.6 FDD369 pKa = 4.09 FLVKK373 pKa = 10.33 YY374 pKa = 9.25 SAPASSKK381 pKa = 10.2 IRR383 pKa = 11.84 IEE385 pKa = 4.98 DD386 pKa = 3.4 IVPTGWGDD394 pKa = 2.98 EE395 pKa = 4.27 WEE397 pKa = 4.28 QPEE400 pKa = 4.29 QQQSPQQQQLLSCSQEE416 pKa = 3.94 EE417 pKa = 5.1 SDD419 pKa = 6.52 DD420 pKa = 3.7 EE421 pKa = 4.93 DD422 pKa = 3.77 DD423 pKa = 3.45 WVSRR427 pKa = 11.84 FQFLAQFDD435 pKa = 4.69 EE436 pKa = 5.06 EE437 pKa = 4.99 PATQPQSPQSPTWYY451 pKa = 10.58 NPFAEE456 pKa = 5.12 GGGSDD461 pKa = 4.47 EE462 pKa = 4.87 NDD464 pKa = 3.29 EE465 pKa = 4.47 NPDD468 pKa = 3.66 PEE470 pKa = 4.5 EE471 pKa = 4.51 SEE473 pKa = 4.46 EE474 pKa = 3.99 MGNEE478 pKa = 3.61 MGYY481 pKa = 7.64 EE482 pKa = 4.14 TEE484 pKa = 4.41 VEE486 pKa = 4.07 EE487 pKa = 4.67 QEE489 pKa = 4.59 EE490 pKa = 4.51 KK491 pKa = 11.0 VAMIQEE497 pKa = 4.7 DD498 pKa = 4.83 PDD500 pKa = 4.1 LLPYY504 pKa = 9.94 PHH506 pKa = 7.13 LRR508 pKa = 11.84 EE509 pKa = 3.87 LLKK512 pKa = 11.02 NEE514 pKa = 4.04 EE515 pKa = 4.72 KK516 pKa = 11.02 VFSTQQSEE524 pKa = 4.61 VSSYY528 pKa = 10.98 RR529 pKa = 11.84 PPQDD533 pKa = 2.75 TAMTPAGYY541 pKa = 10.68 APARR545 pKa = 11.84 GEE547 pKa = 4.22 ASSSTHH553 pKa = 4.48 QPMFEE558 pKa = 4.36 GYY560 pKa = 8.43 MPRR563 pKa = 11.84 RR564 pKa = 11.84 PQFKK568 pKa = 8.34 QDD570 pKa = 2.88 RR571 pKa = 11.84 STEE574 pKa = 3.9 YY575 pKa = 9.48 WQFPTAQGQTGAMFVIPRR593 pKa = 11.84 QIGLFHH599 pKa = 7.41 DD600 pKa = 4.57 AFNRR604 pKa = 11.84 WEE606 pKa = 4.8 SITKK610 pKa = 10.39 NYY612 pKa = 9.75 VASQGFTDD620 pKa = 4.16 SKK622 pKa = 11.4 DD623 pKa = 3.2 KK624 pKa = 11.7 AEE626 pKa = 4.07 FMEE629 pKa = 4.27 NLLGEE634 pKa = 4.54 TEE636 pKa = 4.13 KK637 pKa = 10.64 LTWVQWRR644 pKa = 11.84 MNFPTEE650 pKa = 3.92 YY651 pKa = 10.68 QEE653 pKa = 4.28 MVNAADD659 pKa = 4.2 GRR661 pKa = 11.84 EE662 pKa = 4.28 GTQNILSQMRR672 pKa = 11.84 RR673 pKa = 11.84 VFTLEE678 pKa = 4.15 DD679 pKa = 3.63 PTTGSTAVQDD689 pKa = 3.38 EE690 pKa = 4.75 AYY692 pKa = 10.41 RR693 pKa = 11.84 DD694 pKa = 3.97 LEE696 pKa = 4.21 RR697 pKa = 11.84 LSCTNIKK704 pKa = 10.65 DD705 pKa = 3.33 IVSFLNDD712 pKa = 3.45 YY713 pKa = 11.14 ARR715 pKa = 11.84 LAAKK719 pKa = 9.56 SGRR722 pKa = 11.84 MFISPEE728 pKa = 3.83 LSEE731 pKa = 4.7 KK732 pKa = 10.59 LWLKK736 pKa = 9.95 MPYY739 pKa = 10.46 DD740 pKa = 4.48 LGNKK744 pKa = 8.65 IRR746 pKa = 11.84 TAYY749 pKa = 8.16 EE750 pKa = 3.85 AKK752 pKa = 10.57 HH753 pKa = 5.95 EE754 pKa = 4.61 GNTIGVFPRR763 pKa = 11.84 ILFTYY768 pKa = 9.78 KK769 pKa = 10.62 YY770 pKa = 10.39 LEE772 pKa = 4.16 QEE774 pKa = 4.29 CKK776 pKa = 9.45 EE777 pKa = 3.93 AAFRR781 pKa = 11.84 RR782 pKa = 11.84 SLKK785 pKa = 10.46 NLSFCSEE792 pKa = 4.11 MPLPGYY798 pKa = 10.2 YY799 pKa = 10.15 GEE801 pKa = 4.11 KK802 pKa = 9.55 KK803 pKa = 9.74 RR804 pKa = 11.84 YY805 pKa = 7.7 GVRR808 pKa = 11.84 RR809 pKa = 11.84 STTYY813 pKa = 9.96 KK814 pKa = 10.44 GKK816 pKa = 9.05 PHH818 pKa = 6.64 PTHH821 pKa = 7.04 ARR823 pKa = 11.84 IEE825 pKa = 4.38 KK826 pKa = 9.8 QKK828 pKa = 10.85 HH829 pKa = 3.41 LVRR832 pKa = 11.84 NKK834 pKa = 9.71 RR835 pKa = 11.84 CKK837 pKa = 10.34 CYY839 pKa = 10.4 LCGEE843 pKa = 4.35 MGHH846 pKa = 6.59 FARR849 pKa = 11.84 EE850 pKa = 4.07 CPNDD854 pKa = 3.4 KK855 pKa = 10.93 KK856 pKa = 10.18 NTRR859 pKa = 11.84 RR860 pKa = 11.84 VAMYY864 pKa = 8.17 EE865 pKa = 3.66 QLNIPEE871 pKa = 4.34 GFEE874 pKa = 4.06 VVSVEE879 pKa = 4.0 EE880 pKa = 4.44 GEE882 pKa = 4.42 EE883 pKa = 3.88 VSDD886 pKa = 4.78 AIFSISEE893 pKa = 4.11 NEE895 pKa = 4.76 DD896 pKa = 2.81 EE897 pKa = 5.33 DD898 pKa = 4.35 ALHH901 pKa = 6.5 TGGAFAEE908 pKa = 4.9 TIFMFHH914 pKa = 7.21 EE915 pKa = 5.08 GTDD918 pKa = 3.38 NVYY921 pKa = 9.49 WAGKK925 pKa = 8.96 KK926 pKa = 9.97 DD927 pKa = 3.18 GYY929 pKa = 10.92 LPYY932 pKa = 10.58 KK933 pKa = 10.46 RR934 pKa = 11.84 ITRR937 pKa = 11.84 EE938 pKa = 3.62 QFQCEE943 pKa = 4.91 HH944 pKa = 5.94 EE945 pKa = 4.06 WQMNQEE951 pKa = 4.19 VATVEE956 pKa = 3.98 LEE958 pKa = 3.93 KK959 pKa = 11.16 CSFCKK964 pKa = 10.36 QEE966 pKa = 3.56 TRR968 pKa = 11.84 RR969 pKa = 11.84 RR970 pKa = 11.84 MRR972 pKa = 11.84 LHH974 pKa = 6.57 CPKK977 pKa = 10.27 CRR979 pKa = 11.84 ITSCVLCSSNYY990 pKa = 9.74 CGIAIKK996 pKa = 10.12 PEE998 pKa = 3.87 PVQTSFFNEE1007 pKa = 3.95 KK1008 pKa = 10.55 SLLTQQQEE1016 pKa = 4.34 YY1017 pKa = 10.12 IAYY1020 pKa = 7.29 QTAEE1024 pKa = 3.76 IKK1026 pKa = 10.49 KK1027 pKa = 9.68 LQEE1030 pKa = 3.64 QLKK1033 pKa = 8.0 QTEE1036 pKa = 4.32 EE1037 pKa = 4.1 KK1038 pKa = 10.59 LAEE1041 pKa = 4.19 AEE1043 pKa = 4.1 RR1044 pKa = 11.84 KK1045 pKa = 8.82 IRR1047 pKa = 11.84 GYY1049 pKa = 11.29 EE1050 pKa = 3.79 NMEE1053 pKa = 3.94 VLEE1056 pKa = 4.3 KK1057 pKa = 10.47 EE1058 pKa = 4.34 RR1059 pKa = 11.84 KK1060 pKa = 9.11 EE1061 pKa = 3.87 MALKK1065 pKa = 10.82 DD1066 pKa = 3.68 MQRR1069 pKa = 11.84 KK1070 pKa = 8.57 IDD1072 pKa = 3.86 EE1073 pKa = 4.83 EE1074 pKa = 4.04 IKK1076 pKa = 10.23 KK1077 pKa = 10.38 AAMQEE1082 pKa = 4.09 LPTEE1086 pKa = 4.31 KK1087 pKa = 10.36 EE1088 pKa = 3.46 LWEE1091 pKa = 3.93 QRR1093 pKa = 11.84 EE1094 pKa = 4.46 GKK1096 pKa = 9.98 AHH1098 pKa = 6.64 IAGAVIAASTEE1109 pKa = 3.94 TGRR1112 pKa = 11.84 EE1113 pKa = 3.3 EE1114 pKa = 3.87 RR1115 pKa = 11.84 RR1116 pKa = 11.84 PVKK1119 pKa = 10.85 GNMLYY1124 pKa = 11.21 NMDD1127 pKa = 4.09 VEE1129 pKa = 4.28 IDD1131 pKa = 3.52 IPSVPRR1137 pKa = 11.84 FTVKK1141 pKa = 10.79 AILDD1145 pKa = 3.73 TGATSCCISMDD1156 pKa = 4.75 KK1157 pKa = 10.42 IPKK1160 pKa = 9.61 AAIEE1164 pKa = 4.22 PNTFEE1169 pKa = 4.03 VTFRR1173 pKa = 11.84 GINSVQKK1180 pKa = 10.6 SNKK1183 pKa = 7.89 KK1184 pKa = 10.03 LKK1186 pKa = 9.21 YY1187 pKa = 7.82 GQMRR1191 pKa = 11.84 IGGHH1195 pKa = 5.41 MFRR1198 pKa = 11.84 IPYY1201 pKa = 7.52 TYY1203 pKa = 10.32 CFEE1206 pKa = 4.28 SLTLGDD1212 pKa = 3.8 DD1213 pKa = 3.45 VQYY1216 pKa = 11.73 VLGCNFIRR1224 pKa = 11.84 NMHH1227 pKa = 5.91 GGVRR1231 pKa = 11.84 LEE1233 pKa = 4.06 GTEE1236 pKa = 3.68 VTFYY1240 pKa = 11.7 KK1241 pKa = 10.71 NITTIQTRR1249 pKa = 11.84 LMAPIVEE1256 pKa = 4.73 EE1257 pKa = 4.57 DD1258 pKa = 4.04 DD1259 pKa = 4.11 EE1260 pKa = 6.5 DD1261 pKa = 6.26 DD1262 pKa = 4.42 EE1263 pKa = 5.95 VEE1265 pKa = 5.76 QEE1267 pKa = 4.5 TNWIRR1272 pKa = 11.84 TMASSTMDD1280 pKa = 3.12 APYY1283 pKa = 10.74 EE1284 pKa = 3.95 KK1285 pKa = 10.18 LRR1287 pKa = 11.84 SSFGPLMKK1295 pKa = 10.1 EE1296 pKa = 4.65 LKK1298 pKa = 9.45 DD1299 pKa = 3.16 QGYY1302 pKa = 10.21 IGEE1305 pKa = 4.48 NPMKK1309 pKa = 9.89 HH1310 pKa = 4.29 WARR1313 pKa = 11.84 NKK1315 pKa = 9.17 VLCYY1319 pKa = 10.42 LDD1321 pKa = 3.48 IKK1323 pKa = 10.25 NPDD1326 pKa = 3.28 MVIEE1330 pKa = 4.69 DD1331 pKa = 4.13 KK1332 pKa = 10.63 PIKK1335 pKa = 10.25 HH1336 pKa = 5.73 VTPQMEE1342 pKa = 4.07 EE1343 pKa = 3.99 SFRR1346 pKa = 11.84 KK1347 pKa = 9.39 HH1348 pKa = 5.36 IKK1350 pKa = 10.36 GLLEE1354 pKa = 4.07 LKK1356 pKa = 10.27 VIRR1359 pKa = 11.84 PSTSKK1364 pKa = 10.38 HH1365 pKa = 4.06 RR1366 pKa = 11.84 TTAFIVNSGTSVDD1379 pKa = 3.66 PVTGKK1384 pKa = 7.38 EE1385 pKa = 4.31 TKK1387 pKa = 10.08 GKK1389 pKa = 10.06 EE1390 pKa = 3.66 RR1391 pKa = 11.84 MVFNYY1396 pKa = 9.62 KK1397 pKa = 10.12 RR1398 pKa = 11.84 LNDD1401 pKa = 3.82 LTEE1404 pKa = 4.44 KK1405 pKa = 10.63 DD1406 pKa = 3.84 QYY1408 pKa = 11.26 SLPGINTIMKK1418 pKa = 9.86 RR1419 pKa = 11.84 VGHH1422 pKa = 6.13 AKK1424 pKa = 9.84 IYY1426 pKa = 10.93 SKK1428 pKa = 11.14 FDD1430 pKa = 3.67 LKK1432 pKa = 11.29 SGFHH1436 pKa = 5.3 QVAMHH1441 pKa = 6.78 PEE1443 pKa = 4.42 SIKK1446 pKa = 8.7 WTAFWVPDD1454 pKa = 3.86 GLYY1457 pKa = 9.27 EE1458 pKa = 4.07 WLVMPFGLKK1467 pKa = 9.49 NAPAVFQRR1475 pKa = 11.84 KK1476 pKa = 7.06 MDD1478 pKa = 3.77 NVFKK1482 pKa = 10.24 GTEE1485 pKa = 3.79 AFIAVYY1491 pKa = 10.11 IDD1493 pKa = 4.96 DD1494 pKa = 4.41 ILVFSQSEE1502 pKa = 4.27 EE1503 pKa = 3.75 EE1504 pKa = 4.4 HH1505 pKa = 6.22 IKK1507 pKa = 10.28 HH1508 pKa = 5.6 IRR1510 pKa = 11.84 VMLEE1514 pKa = 3.43 KK1515 pKa = 10.49 CRR1517 pKa = 11.84 EE1518 pKa = 3.99 NGLVLSPTKK1527 pKa = 10.37 MKK1529 pKa = 10.05 IAQRR1533 pKa = 11.84 KK1534 pKa = 8.24 VEE1536 pKa = 4.05 FLGAILEE1543 pKa = 4.28 AGRR1546 pKa = 11.84 IQLQPHH1552 pKa = 7.09 IIKK1555 pKa = 10.46 KK1556 pKa = 9.33 VVNFKK1561 pKa = 11.21 DD1562 pKa = 3.37 EE1563 pKa = 4.62 DD1564 pKa = 3.73 LQEE1567 pKa = 4.47 TKK1569 pKa = 10.77 GLRR1572 pKa = 11.84 SFLGLLNYY1580 pKa = 9.78 ARR1582 pKa = 11.84 AYY1584 pKa = 8.24 IPQMGRR1590 pKa = 11.84 LLSPLYY1596 pKa = 10.92 AKK1598 pKa = 10.43 VSPKK1602 pKa = 10.7 GEE1604 pKa = 3.9 KK1605 pKa = 10.0 KK1606 pKa = 10.58 LNKK1609 pKa = 9.64 EE1610 pKa = 3.41 DD1611 pKa = 3.41 WKK1613 pKa = 10.97 LVRR1616 pKa = 11.84 QIKK1619 pKa = 9.54 EE1620 pKa = 3.93 QVQQLPDD1627 pKa = 3.76 LEE1629 pKa = 5.38 LPPQEE1634 pKa = 4.62 CFIILEE1640 pKa = 4.33 TDD1642 pKa = 2.86 GCMEE1646 pKa = 4.24 GWGGVCKK1653 pKa = 9.9 WKK1655 pKa = 10.62 KK1656 pKa = 10.28 KK1657 pKa = 10.53 EE1658 pKa = 3.88 YY1659 pKa = 10.17 DD1660 pKa = 3.42 PKK1662 pKa = 9.65 NTEE1665 pKa = 4.28 RR1666 pKa = 11.84 ICAYY1670 pKa = 10.39 ASGKK1674 pKa = 8.29 FHH1676 pKa = 7.42 PIKK1679 pKa = 10.25 STIDD1683 pKa = 3.55 AEE1685 pKa = 4.05 IHH1687 pKa = 6.01 AVMNSLEE1694 pKa = 3.99 AFKK1697 pKa = 10.43 IHH1699 pKa = 6.49 YY1700 pKa = 9.45 LDD1702 pKa = 4.74 KK1703 pKa = 10.67 PSLTIRR1709 pKa = 11.84 TDD1711 pKa = 3.3 CQAIIAFFDD1720 pKa = 4.06 TISNHH1725 pKa = 5.4 KK1726 pKa = 9.58 PSRR1729 pKa = 11.84 LRR1731 pKa = 11.84 WINFTDD1737 pKa = 3.91 YY1738 pKa = 10.33 VTGLGIPVNFQHH1750 pKa = 7.01 VKK1752 pKa = 11.06 GEE1754 pKa = 4.22 DD1755 pKa = 3.29 NRR1757 pKa = 11.84 LADD1760 pKa = 3.86 ALSRR1764 pKa = 11.84 LISVIFEE1771 pKa = 5.18 AGQQWQEE1778 pKa = 3.3 EE1779 pKa = 4.67 STRR1782 pKa = 11.84 MQHH1785 pKa = 5.38 LTQLIGEE1792 pKa = 4.47 HH1793 pKa = 6.18 YY1794 pKa = 10.4 KK1795 pKa = 10.83 FEE1797 pKa = 4.68 ASGKK1801 pKa = 9.19 KK1802 pKa = 8.7 HH1803 pKa = 5.86 HH1804 pKa = 6.02 QLKK1807 pKa = 8.32 EE1808 pKa = 4.01 TLTALITSTMNSWTEE1823 pKa = 3.71 KK1824 pKa = 10.6 SLSSTQKK1831 pKa = 10.26 EE1832 pKa = 4.08 ALLSDD1837 pKa = 3.47 TRR1839 pKa = 11.84 ITSTNKK1845 pKa = 9.19 WPLLKK1850 pKa = 10.53 DD1851 pKa = 3.67 KK1852 pKa = 10.47 PVHH1855 pKa = 5.79 KK1856 pKa = 10.36 QNKK1859 pKa = 8.69 HH1860 pKa = 4.3 SNNWKK1865 pKa = 9.11 EE1866 pKa = 4.11 YY1867 pKa = 7.99 KK1868 pKa = 10.14 DD1869 pKa = 3.48 KK1870 pKa = 11.15 RR1871 pKa = 11.84 RR1872 pKa = 11.84 TTSGSQRR1879 pKa = 11.84 QEE1881 pKa = 3.51 TTGPVTGYY1889 pKa = 10.53 HH1890 pKa = 6.53 PPP1892 pKa = 3.36
Molecular weight: 218.4 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.777
IPC2_protein 5.766
IPC_protein 5.804
Toseland 6.122
ProMoST 6.122
Dawson 6.02
Bjellqvist 6.046
Wikipedia 6.008
Rodwell 5.995
Grimsley 6.262
Solomon 6.02
Lehninger 6.008
Nozaki 6.275
DTASelect 6.44
Thurlkill 6.44
EMBOSS 6.402
Sillero 6.364
Patrickios 4.329
IPC_peptide 6.033
IPC2_peptide 6.338
IPC2.peptide.svr19 6.346
Protein with the highest isoelectric point:
>tr|W6CW90|W6CW90_9VIRU Uncharacterized protein OS=Hibiscus bacilliform virus GD1 OX=1459800 PE=4 SV=1
MM1 pKa = 6.93 SRR3 pKa = 11.84 RR4 pKa = 11.84 WEE6 pKa = 3.88 EE7 pKa = 4.65 EE8 pKa = 3.29 IQKK11 pKa = 9.85 WYY13 pKa = 9.09 EE14 pKa = 3.79 QSSTSSLEE22 pKa = 4.0 YY23 pKa = 10.72 LDD25 pKa = 5.0 LASTSKK31 pKa = 10.83 VSNQQLAHH39 pKa = 6.27 NLSVIYY45 pKa = 10.16 NHH47 pKa = 6.56 SSLSSRR53 pKa = 11.84 VQIKK57 pKa = 10.1 NYY59 pKa = 10.57 KK60 pKa = 9.56 KK61 pKa = 9.81 IQEE64 pKa = 4.27 SLDD67 pKa = 3.91 SIEE70 pKa = 4.31 SRR72 pKa = 11.84 ISKK75 pKa = 10.52 LEE77 pKa = 4.14 SNLKK81 pKa = 10.27 NLTKK85 pKa = 10.39 TFIANRR91 pKa = 11.84 PLTQAEE97 pKa = 4.41 VTTLVSEE104 pKa = 5.24 ISQQPKK110 pKa = 10.1 LVEE113 pKa = 4.1 AQALQLTEE121 pKa = 4.64 DD122 pKa = 4.02 LNKK125 pKa = 10.64 KK126 pKa = 7.0 LTRR129 pKa = 11.84 VEE131 pKa = 4.07 KK132 pKa = 10.47 LLHH135 pKa = 6.89 KK136 pKa = 10.56 LEE138 pKa = 4.24 QWSQSS143 pKa = 3.21
Molecular weight: 16.56 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.269
IPC2_protein 8.156
IPC_protein 8.273
Toseland 9.033
ProMoST 8.624
Dawson 9.209
Bjellqvist 8.799
Wikipedia 9.341
Rodwell 9.502
Grimsley 9.253
Solomon 9.399
Lehninger 9.37
Nozaki 8.887
DTASelect 8.858
Thurlkill 9.033
EMBOSS 9.385
Sillero 9.121
Patrickios 5.105
IPC_peptide 9.385
IPC2_peptide 7.424
IPC2.peptide.svr19 7.583
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
2313
135
1892
578.3
66.6
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.88 ± 1.086
1.254 ± 0.512
4.799 ± 0.622
9.555 ± 0.378
3.415 ± 1.037
4.929 ± 1.423
2.291 ± 0.257
6.053 ± 0.907
6.961 ± 0.934
7.566 ± 1.632
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.724 ± 0.788
4.15 ± 0.496
4.626 ± 1.021
6.269 ± 0.652
6.528 ± 1.004
6.572 ± 2.298
6.831 ± 0.496
4.929 ± 0.863
1.47 ± 0.267
3.199 ± 0.519
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here