Wongabel hapavirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Hapavirus

Average proteome isoelectric point is 5.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B2X7D3|B2X7D3_9RHAB Polymerase-associated protein OS=Wongabel hapavirus OX=1972626 GN=P PE=4 SV=1
MM1 pKa = 7.34MLFKK5 pKa = 11.09LNLISNIPFVIYY17 pKa = 9.75EE18 pKa = 4.08IQEE21 pKa = 3.8LTGFIIYY28 pKa = 9.96IEE30 pKa = 4.28FPVEE34 pKa = 3.86CEE36 pKa = 3.53NMLFYY41 pKa = 11.19GLQIAGYY48 pKa = 6.51TT49 pKa = 3.55

Molecular weight: 5.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B2X7E0|B2X7E0_9RHAB GDP polyribonucleotidyltransferase OS=Wongabel hapavirus OX=1972626 GN=L PE=4 SV=1
MM1 pKa = 7.62KK2 pKa = 10.23NLSSSVGDD10 pKa = 2.97GHH12 pKa = 6.99IWLKK16 pKa = 10.49IHH18 pKa = 6.81FLTMGFSINFDD29 pKa = 4.02PIINKK34 pKa = 8.68FRR36 pKa = 11.84EE37 pKa = 3.97FQTNINHH44 pKa = 7.14NINEE48 pKa = 4.16QLDD51 pKa = 3.97KK52 pKa = 11.68LKK54 pKa = 10.36MVWINLGSHH63 pKa = 5.48IKK65 pKa = 9.46YY66 pKa = 9.07WFIIIISILTILFILFLLIKK86 pKa = 8.77ITKK89 pKa = 10.36LILNCKK95 pKa = 10.01KK96 pKa = 10.34IFSCCCNVCCKK107 pKa = 10.12KK108 pKa = 10.49RR109 pKa = 11.84PKK111 pKa = 10.36VDD113 pKa = 2.75IRR115 pKa = 11.84SKK117 pKa = 10.64EE118 pKa = 3.96KK119 pKa = 10.92VKK121 pKa = 10.79VFSILPP127 pKa = 3.73

Molecular weight: 14.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10

0

10

4313

49

2118

431.3

49.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.014 ± 0.244

1.832 ± 0.187

6.214 ± 0.518

5.959 ± 0.396

5.147 ± 0.322

5.449 ± 0.386

2.574 ± 0.251

8.579 ± 0.679

7.257 ± 0.33

9.97 ± 0.653

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.342 ± 0.325

5.912 ± 0.309

4.336 ± 0.272

3.107 ± 0.311

4.22 ± 0.222

7.976 ± 0.39

5.054 ± 0.586

4.846 ± 0.412

2.203 ± 0.148

4.011 ± 0.233
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski