Torque teno mini virus 11

Taxonomy: Viruses; Anelloviridae; Betatorquevirus

Average proteome isoelectric point is 7.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A8DMQ9|A8DMQ9_9VIRU Capsid protein OS=Torque teno mini virus 11 OX=2065037 PE=3 SV=1
MM1 pKa = 7.47SYY3 pKa = 10.56KK4 pKa = 10.09PPRR7 pKa = 11.84YY8 pKa = 9.37GPQGLEE14 pKa = 3.76LQFLNSIFTNHH25 pKa = 7.22DD26 pKa = 3.97LFCGCDD32 pKa = 3.34DD33 pKa = 3.9TLKK36 pKa = 10.77HH37 pKa = 6.21ILSIFNKK44 pKa = 8.89QNKK47 pKa = 9.46ANLSDD52 pKa = 3.61TKK54 pKa = 10.56IQEE57 pKa = 4.31IKK59 pKa = 10.69CLLTGEE65 pKa = 4.35TTEE68 pKa = 4.66TGDD71 pKa = 4.62KK72 pKa = 10.92GDD74 pKa = 3.72GAAGVLDD81 pKa = 5.08AIEE84 pKa = 5.79DD85 pKa = 3.84GDD87 pKa = 4.45LDD89 pKa = 4.6ALFEE93 pKa = 5.04LSDD96 pKa = 6.07DD97 pKa = 3.61MDD99 pKa = 4.01EE100 pKa = 4.68PNGG103 pKa = 3.73

Molecular weight: 11.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A8DMR0|A8DMR0_9VIRU ORF3 OS=Torque teno mini virus 11 OX=2065037 PE=4 SV=1
MM1 pKa = 7.52IPVHH5 pKa = 5.74SQNGPQPVTSNKK17 pKa = 7.76QFRR20 pKa = 11.84SRR22 pKa = 11.84IQNTTQATTSTLGTLEE38 pKa = 4.05GTFLQTQLSKK48 pKa = 11.03DD49 pKa = 3.39LKK51 pKa = 9.18KK52 pKa = 9.31TKK54 pKa = 10.67KK55 pKa = 10.29LMRR58 pKa = 11.84LFQLKK63 pKa = 9.14QAQKK67 pKa = 8.6AAKK70 pKa = 8.87RR71 pKa = 11.84RR72 pKa = 11.84SPSPPNTPRR81 pKa = 11.84KK82 pKa = 9.36LRR84 pKa = 11.84RR85 pKa = 11.84SIDD88 pKa = 3.31TGKK91 pKa = 10.6KK92 pKa = 9.66EE93 pKa = 4.45RR94 pKa = 11.84DD95 pKa = 3.29TAAQAPQTPTKK106 pKa = 10.41PPATTAAAHH115 pKa = 6.09QIPKK119 pKa = 8.45ITIIHH124 pKa = 6.25KK125 pKa = 9.3PVKK128 pKa = 10.01INLFNDD134 pKa = 3.78PVPVKK139 pKa = 10.57NRR141 pKa = 11.84PFKK144 pKa = 8.89PWEE147 pKa = 3.82WEE149 pKa = 3.85DD150 pKa = 3.54EE151 pKa = 4.15KK152 pKa = 11.47FIASWLKK159 pKa = 10.03RR160 pKa = 11.84PQRR163 pKa = 11.84HH164 pKa = 4.94YY165 pKa = 10.71FYY167 pKa = 10.87DD168 pKa = 3.71KK169 pKa = 8.61PTYY172 pKa = 9.64PIFPITPLANFDD184 pKa = 4.92LNFKK188 pKa = 9.75EE189 pKa = 4.32

Molecular weight: 21.75 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

954

103

662

318.0

36.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.403 ± 0.948

1.363 ± 0.536

5.451 ± 1.783

3.774 ± 0.752

4.298 ± 0.431

4.927 ± 1.351

1.782 ± 0.141

5.556 ± 0.136

9.434 ± 0.885

7.442 ± 1.304

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.468 ± 0.162

6.184 ± 0.556

7.128 ± 1.605

4.927 ± 0.862

5.975 ± 1.272

7.652 ± 1.458

8.071 ± 0.874

2.935 ± 0.555

2.621 ± 0.878

4.612 ± 1.478
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski