Micrococcus terreus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Micrococcus

Average proteome isoelectric point is 5.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2759 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1I7ML73|A0A1I7ML73_9MICC Nucleoside-diphosphate-sugar epimerase OS=Micrococcus terreus OX=574650 GN=SAMN04487966_104247 PE=4 SV=1
MM1 pKa = 6.63TTAHH5 pKa = 7.64CIRR8 pKa = 11.84HH9 pKa = 5.15TMTALGAVTALILMTGCADD28 pKa = 3.27QFRR31 pKa = 11.84AIDD34 pKa = 3.72SADD37 pKa = 3.52SEE39 pKa = 4.92GPSAHH44 pKa = 6.7GAQSSTNEE52 pKa = 3.95SRR54 pKa = 11.84LEE56 pKa = 4.08TIKK59 pKa = 10.33TSGVLNACTTGDD71 pKa = 3.85YY72 pKa = 11.12PPFTEE77 pKa = 4.29DD78 pKa = 3.11TGDD81 pKa = 3.83GEE83 pKa = 4.51LTGIDD88 pKa = 3.21VDD90 pKa = 4.1MAADD94 pKa = 3.58LAEE97 pKa = 4.11TLEE100 pKa = 4.83VDD102 pKa = 4.33IEE104 pKa = 4.08WHH106 pKa = 4.36QTSWGDD112 pKa = 4.47LMDD115 pKa = 4.67TFLSDD120 pKa = 3.47CDD122 pKa = 3.48IAVGGISMNPPRR134 pKa = 11.84AEE136 pKa = 3.51QVFFSDD142 pKa = 6.18PILEE146 pKa = 4.63DD147 pKa = 3.27GKK149 pKa = 9.63TSIARR154 pKa = 11.84CDD156 pKa = 3.41EE157 pKa = 4.05VQNYY161 pKa = 6.89QTIEE165 pKa = 4.96DD166 pKa = 3.8INQPNVTSIFPEE178 pKa = 4.98GGTNEE183 pKa = 3.89AFARR187 pKa = 11.84EE188 pKa = 4.23HH189 pKa = 6.49FPNGDD194 pKa = 3.68LKK196 pKa = 10.18THH198 pKa = 7.12DD199 pKa = 4.13NLTIFDD205 pKa = 4.08EE206 pKa = 4.73LVAGGADD213 pKa = 3.49VMTTDD218 pKa = 3.77RR219 pKa = 11.84AEE221 pKa = 4.14VLYY224 pKa = 10.24IAHH227 pKa = 7.25EE228 pKa = 4.02YY229 pKa = 11.19DD230 pKa = 3.58EE231 pKa = 5.13LCAVNPDD238 pKa = 3.22EE239 pKa = 5.1TYY241 pKa = 10.95DD242 pKa = 3.93FSVMGYY248 pKa = 7.76MLPQGDD254 pKa = 4.43VVFKK258 pKa = 10.6EE259 pKa = 5.38YY260 pKa = 10.92VDD262 pKa = 3.4QWLTIALKK270 pKa = 10.7DD271 pKa = 3.53GTYY274 pKa = 11.05DD275 pKa = 3.89EE276 pKa = 5.35IAEE279 pKa = 4.11PWVGNVEE286 pKa = 5.61LIPEE290 pKa = 4.37DD291 pKa = 3.36

Molecular weight: 31.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1I7MSA4|A0A1I7MSA4_9MICC Adenylosuccinate synthetase OS=Micrococcus terreus OX=574650 GN=purA PE=3 SV=1
MM1 pKa = 7.64PLKK4 pKa = 10.75NLFRR8 pKa = 11.84RR9 pKa = 11.84AQSFARR15 pKa = 11.84SPEE18 pKa = 3.84GKK20 pKa = 10.33RR21 pKa = 11.84MINQAGRR28 pKa = 11.84AARR31 pKa = 11.84SRR33 pKa = 11.84GGRR36 pKa = 11.84RR37 pKa = 11.84GGTRR41 pKa = 11.84PAGGGLMGLAQQFLGRR57 pKa = 11.84GRR59 pKa = 11.84RR60 pKa = 11.84RR61 pKa = 3.22

Molecular weight: 6.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2759

0

2759

930413

41

2071

337.2

36.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.403 ± 0.053

0.568 ± 0.01

5.925 ± 0.043

6.22 ± 0.047

2.79 ± 0.03

9.045 ± 0.039

2.317 ± 0.02

3.821 ± 0.036

1.994 ± 0.032

10.095 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.075 ± 0.022

1.907 ± 0.023

5.744 ± 0.037

3.872 ± 0.028

7.158 ± 0.05

5.719 ± 0.032

6.344 ± 0.038

8.599 ± 0.039

1.533 ± 0.019

1.87 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski