Amino acid dipepetide frequency for Wenling crustacean virus 4

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
1.08AlaAla: 1.08 ± 0.0
0.36AlaCys: 0.36 ± 0.0
2.519AlaAsp: 2.519 ± 0.0
1.08AlaGlu: 1.08 ± 0.0
2.159AlaPhe: 2.159 ± 0.0
2.519AlaGly: 2.519 ± 0.0
0.0AlaHis: 0.0 ± 0.0
2.879AlaIle: 2.879 ± 0.0
2.879AlaLys: 2.879 ± 0.0
4.318AlaLeu: 4.318 ± 0.0
0.72AlaMet: 0.72 ± 0.0
2.159AlaAsn: 2.159 ± 0.0
2.519AlaPro: 2.519 ± 0.0
0.36AlaGln: 0.36 ± 0.0
1.08AlaArg: 1.08 ± 0.0
5.398AlaSer: 5.398 ± 0.0
2.159AlaThr: 2.159 ± 0.0
3.598AlaVal: 3.598 ± 0.0
0.0AlaTrp: 0.0 ± 0.0
1.08AlaTyr: 1.08 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.439CysAsp: 1.439 ± 0.0
1.08CysGlu: 1.08 ± 0.0
1.439CysPhe: 1.439 ± 0.0
1.08CysGly: 1.08 ± 0.0
0.72CysHis: 0.72 ± 0.0
1.08CysIle: 1.08 ± 0.0
1.439CysLys: 1.439 ± 0.0
1.799CysLeu: 1.799 ± 0.0
1.08CysMet: 1.08 ± 0.0
1.08CysAsn: 1.08 ± 0.0
1.08CysPro: 1.08 ± 0.0
0.36CysGln: 0.36 ± 0.0
1.08CysArg: 1.08 ± 0.0
1.439CysSer: 1.439 ± 0.0
0.36CysThr: 0.36 ± 0.0
1.08CysVal: 1.08 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
1.439AspAla: 1.439 ± 0.0
1.799AspCys: 1.799 ± 0.0
5.398AspAsp: 5.398 ± 0.0
3.598AspGlu: 3.598 ± 0.0
3.958AspPhe: 3.958 ± 0.0
2.519AspGly: 2.519 ± 0.0
0.72AspHis: 0.72 ± 0.0
6.477AspIle: 6.477 ± 0.0
4.678AspLys: 4.678 ± 0.0
7.557AspLeu: 7.557 ± 0.0
1.799AspMet: 1.799 ± 0.0
1.799AspAsn: 1.799 ± 0.0
2.159AspPro: 2.159 ± 0.0
2.159AspGln: 2.159 ± 0.0
3.598AspArg: 3.598 ± 0.0
5.398AspSer: 5.398 ± 0.0
1.439AspThr: 1.439 ± 0.0
6.117AspVal: 6.117 ± 0.0
1.439AspTrp: 1.439 ± 0.0
3.598AspTyr: 3.598 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.159GluAla: 2.159 ± 0.0
1.08GluCys: 1.08 ± 0.0
2.519GluAsp: 2.519 ± 0.0
3.239GluGlu: 3.239 ± 0.0
3.239GluPhe: 3.239 ± 0.0
1.799GluGly: 1.799 ± 0.0
1.08GluHis: 1.08 ± 0.0
3.239GluIle: 3.239 ± 0.0
4.678GluLys: 4.678 ± 0.0
4.678GluLeu: 4.678 ± 0.0
0.72GluMet: 0.72 ± 0.0
3.239GluAsn: 3.239 ± 0.0
1.799GluPro: 1.799 ± 0.0
2.519GluGln: 2.519 ± 0.0
4.318GluArg: 4.318 ± 0.0
5.038GluSer: 5.038 ± 0.0
1.08GluThr: 1.08 ± 0.0
6.477GluVal: 6.477 ± 0.0
0.72GluTrp: 0.72 ± 0.0
4.678GluTyr: 4.678 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.799PheAla: 1.799 ± 0.0
0.72PheCys: 0.72 ± 0.0
3.239PheAsp: 3.239 ± 0.0
3.598PheGlu: 3.598 ± 0.0
1.439PhePhe: 1.439 ± 0.0
5.398PheGly: 5.398 ± 0.0
0.36PheHis: 0.36 ± 0.0
3.958PheIle: 3.958 ± 0.0
5.038PheLys: 5.038 ± 0.0
2.519PheLeu: 2.519 ± 0.0
1.799PheMet: 1.799 ± 0.0
5.398PheAsn: 5.398 ± 0.0
3.239PhePro: 3.239 ± 0.0
1.08PheGln: 1.08 ± 0.0
3.598PheArg: 3.598 ± 0.0
5.398PheSer: 5.398 ± 0.0
2.159PheThr: 2.159 ± 0.0
3.958PheVal: 3.958 ± 0.0
0.36PheTrp: 0.36 ± 0.0
2.519PheTyr: 2.519 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.318GlyAla: 4.318 ± 0.0
0.0GlyCys: 0.0 ± 0.0
3.958GlyAsp: 3.958 ± 0.0
2.519GlyGlu: 2.519 ± 0.0
2.879GlyPhe: 2.879 ± 0.0
1.799GlyGly: 1.799 ± 0.0
0.72GlyHis: 0.72 ± 0.0
4.678GlyIle: 4.678 ± 0.0
3.239GlyLys: 3.239 ± 0.0
3.958GlyLeu: 3.958 ± 0.0
0.72GlyMet: 0.72 ± 0.0
5.038GlyAsn: 5.038 ± 0.0
1.439GlyPro: 1.439 ± 0.0
0.36GlyGln: 0.36 ± 0.0
2.519GlyArg: 2.519 ± 0.0
7.557GlySer: 7.557 ± 0.0
2.159GlyThr: 2.159 ± 0.0
3.239GlyVal: 3.239 ± 0.0
0.36GlyTrp: 0.36 ± 0.0
3.958GlyTyr: 3.958 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.08HisAla: 1.08 ± 0.0
1.08HisCys: 1.08 ± 0.0
0.36HisAsp: 0.36 ± 0.0
0.36HisGlu: 0.36 ± 0.0
0.0HisPhe: 0.0 ± 0.0
1.08HisGly: 1.08 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.439HisIle: 1.439 ± 0.0
0.0HisLys: 0.0 ± 0.0
2.519HisLeu: 2.519 ± 0.0
1.08HisMet: 1.08 ± 0.0
0.72HisAsn: 0.72 ± 0.0
2.159HisPro: 2.159 ± 0.0
0.72HisGln: 0.72 ± 0.0
0.0HisArg: 0.0 ± 0.0
1.439HisSer: 1.439 ± 0.0
1.799HisThr: 1.799 ± 0.0
1.08HisVal: 1.08 ± 0.0
0.36HisTrp: 0.36 ± 0.0
1.08HisTyr: 1.08 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.879IleAla: 2.879 ± 0.0
0.36IleCys: 0.36 ± 0.0
7.917IleAsp: 7.917 ± 0.0
5.757IleGlu: 5.757 ± 0.0
3.598IlePhe: 3.598 ± 0.0
4.318IleGly: 4.318 ± 0.0
1.08IleHis: 1.08 ± 0.0
4.678IleIle: 4.678 ± 0.0
3.239IleLys: 3.239 ± 0.0
4.678IleLeu: 4.678 ± 0.0
2.519IleMet: 2.519 ± 0.0
7.197IleAsn: 7.197 ± 0.0
1.799IlePro: 1.799 ± 0.0
2.879IleGln: 2.879 ± 0.0
3.958IleArg: 3.958 ± 0.0
6.837IleSer: 6.837 ± 0.0
1.439IleThr: 1.439 ± 0.0
7.917IleVal: 7.917 ± 0.0
0.72IleTrp: 0.72 ± 0.0
1.799IleTyr: 1.799 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
1.439LysAla: 1.439 ± 0.0
1.439LysCys: 1.439 ± 0.0
5.038LysAsp: 5.038 ± 0.0
3.239LysGlu: 3.239 ± 0.0
4.678LysPhe: 4.678 ± 0.0
3.598LysGly: 3.598 ± 0.0
1.439LysHis: 1.439 ± 0.0
6.837LysIle: 6.837 ± 0.0
3.239LysLys: 3.239 ± 0.0
5.398LysLeu: 5.398 ± 0.0
1.799LysMet: 1.799 ± 0.0
2.519LysAsn: 2.519 ± 0.0
2.519LysPro: 2.519 ± 0.0
1.799LysGln: 1.799 ± 0.0
2.519LysArg: 2.519 ± 0.0
5.398LysSer: 5.398 ± 0.0
1.799LysThr: 1.799 ± 0.0
4.318LysVal: 4.318 ± 0.0
1.799LysTrp: 1.799 ± 0.0
3.598LysTyr: 3.598 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.318LeuAla: 4.318 ± 0.0
1.08LeuCys: 1.08 ± 0.0
7.557LeuAsp: 7.557 ± 0.0
4.318LeuGlu: 4.318 ± 0.0
5.398LeuPhe: 5.398 ± 0.0
6.117LeuGly: 6.117 ± 0.0
1.439LeuHis: 1.439 ± 0.0
5.398LeuIle: 5.398 ± 0.0
8.276LeuLys: 8.276 ± 0.0
6.837LeuLeu: 6.837 ± 0.0
3.239LeuMet: 3.239 ± 0.0
4.678LeuAsn: 4.678 ± 0.0
2.879LeuPro: 2.879 ± 0.0
2.519LeuGln: 2.519 ± 0.0
3.598LeuArg: 3.598 ± 0.0
7.197LeuSer: 7.197 ± 0.0
3.958LeuThr: 3.958 ± 0.0
6.477LeuVal: 6.477 ± 0.0
1.439LeuTrp: 1.439 ± 0.0
3.958LeuTyr: 3.958 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.08MetAla: 1.08 ± 0.0
1.799MetCys: 1.799 ± 0.0
0.72MetAsp: 0.72 ± 0.0
2.159MetGlu: 2.159 ± 0.0
2.159MetPhe: 2.159 ± 0.0
2.159MetGly: 2.159 ± 0.0
0.36MetHis: 0.36 ± 0.0
2.159MetIle: 2.159 ± 0.0
2.159MetLys: 2.159 ± 0.0
2.159MetLeu: 2.159 ± 0.0
0.72MetMet: 0.72 ± 0.0
1.439MetAsn: 1.439 ± 0.0
0.72MetPro: 0.72 ± 0.0
1.08MetGln: 1.08 ± 0.0
1.439MetArg: 1.439 ± 0.0
1.08MetSer: 1.08 ± 0.0
0.36MetThr: 0.36 ± 0.0
1.439MetVal: 1.439 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.799AsnAla: 1.799 ± 0.0
1.439AsnCys: 1.439 ± 0.0
4.678AsnAsp: 4.678 ± 0.0
3.598AsnGlu: 3.598 ± 0.0
3.598AsnPhe: 3.598 ± 0.0
3.239AsnGly: 3.239 ± 0.0
2.159AsnHis: 2.159 ± 0.0
5.398AsnIle: 5.398 ± 0.0
3.598AsnLys: 3.598 ± 0.0
5.757AsnLeu: 5.757 ± 0.0
1.08AsnMet: 1.08 ± 0.0
4.678AsnAsn: 4.678 ± 0.0
2.159AsnPro: 2.159 ± 0.0
2.159AsnGln: 2.159 ± 0.0
2.159AsnArg: 2.159 ± 0.0
3.958AsnSer: 3.958 ± 0.0
1.439AsnThr: 1.439 ± 0.0
2.519AsnVal: 2.519 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
2.519AsnTyr: 2.519 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.08ProAla: 1.08 ± 0.0
0.36ProCys: 0.36 ± 0.0
2.159ProAsp: 2.159 ± 0.0
2.159ProGlu: 2.159 ± 0.0
2.159ProPhe: 2.159 ± 0.0
2.519ProGly: 2.519 ± 0.0
0.72ProHis: 0.72 ± 0.0
2.519ProIle: 2.519 ± 0.0
3.958ProLys: 3.958 ± 0.0
3.958ProLeu: 3.958 ± 0.0
0.36ProMet: 0.36 ± 0.0
1.799ProAsn: 1.799 ± 0.0
1.439ProPro: 1.439 ± 0.0
0.36ProGln: 0.36 ± 0.0
1.439ProArg: 1.439 ± 0.0
2.519ProSer: 2.519 ± 0.0
2.519ProThr: 2.519 ± 0.0
2.519ProVal: 2.519 ± 0.0
0.36ProTrp: 0.36 ± 0.0
2.519ProTyr: 2.519 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
0.72GlnAla: 0.72 ± 0.0
1.08GlnCys: 1.08 ± 0.0
1.799GlnAsp: 1.799 ± 0.0
1.799GlnGlu: 1.799 ± 0.0
1.799GlnPhe: 1.799 ± 0.0
2.159GlnGly: 2.159 ± 0.0
0.36GlnHis: 0.36 ± 0.0
3.598GlnIle: 3.598 ± 0.0
0.72GlnLys: 0.72 ± 0.0
3.239GlnLeu: 3.239 ± 0.0
0.72GlnMet: 0.72 ± 0.0
0.72GlnAsn: 0.72 ± 0.0
0.36GlnPro: 0.36 ± 0.0
0.72GlnGln: 0.72 ± 0.0
1.08GlnArg: 1.08 ± 0.0
3.598GlnSer: 3.598 ± 0.0
0.72GlnThr: 0.72 ± 0.0
2.879GlnVal: 2.879 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.36GlnTyr: 0.36 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.159ArgAla: 2.159 ± 0.0
0.0ArgCys: 0.0 ± 0.0
3.958ArgAsp: 3.958 ± 0.0
1.799ArgGlu: 1.799 ± 0.0
4.318ArgPhe: 4.318 ± 0.0
2.519ArgGly: 2.519 ± 0.0
0.72ArgHis: 0.72 ± 0.0
3.239ArgIle: 3.239 ± 0.0
2.159ArgLys: 2.159 ± 0.0
4.318ArgLeu: 4.318 ± 0.0
0.72ArgMet: 0.72 ± 0.0
3.598ArgAsn: 3.598 ± 0.0
1.799ArgPro: 1.799 ± 0.0
1.08ArgGln: 1.08 ± 0.0
1.08ArgArg: 1.08 ± 0.0
1.799ArgSer: 1.799 ± 0.0
2.159ArgThr: 2.159 ± 0.0
5.398ArgVal: 5.398 ± 0.0
1.08ArgTrp: 1.08 ± 0.0
2.159ArgTyr: 2.159 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.038SerAla: 5.038 ± 0.0
2.519SerCys: 2.519 ± 0.0
5.038SerAsp: 5.038 ± 0.0
4.318SerGlu: 4.318 ± 0.0
6.117SerPhe: 6.117 ± 0.0
4.678SerGly: 4.678 ± 0.0
2.879SerHis: 2.879 ± 0.0
5.757SerIle: 5.757 ± 0.0
3.958SerLys: 3.958 ± 0.0
11.515SerLeu: 11.515 ± 0.0
1.08SerMet: 1.08 ± 0.0
2.519SerAsn: 2.519 ± 0.0
2.159SerPro: 2.159 ± 0.0
2.519SerGln: 2.519 ± 0.0
2.159SerArg: 2.159 ± 0.0
7.197SerSer: 7.197 ± 0.0
3.598SerThr: 3.598 ± 0.0
9.356SerVal: 9.356 ± 0.0
1.799SerTrp: 1.799 ± 0.0
3.239SerTyr: 3.239 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
1.439ThrAla: 1.439 ± 0.0
0.36ThrCys: 0.36 ± 0.0
2.159ThrAsp: 2.159 ± 0.0
2.159ThrGlu: 2.159 ± 0.0
2.159ThrPhe: 2.159 ± 0.0
0.72ThrGly: 0.72 ± 0.0
1.439ThrHis: 1.439 ± 0.0
1.799ThrIle: 1.799 ± 0.0
2.879ThrLys: 2.879 ± 0.0
3.239ThrLeu: 3.239 ± 0.0
1.439ThrMet: 1.439 ± 0.0
1.439ThrAsn: 1.439 ± 0.0
1.799ThrPro: 1.799 ± 0.0
0.0ThrGln: 0.0 ± 0.0
3.598ThrArg: 3.598 ± 0.0
3.598ThrSer: 3.598 ± 0.0
2.519ThrThr: 2.519 ± 0.0
2.879ThrVal: 2.879 ± 0.0
0.0ThrTrp: 0.0 ± 0.0
1.08ThrTyr: 1.08 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
2.879ValAla: 2.879 ± 0.0
0.36ValCys: 0.36 ± 0.0
3.239ValAsp: 3.239 ± 0.0
6.837ValGlu: 6.837 ± 0.0
4.318ValPhe: 4.318 ± 0.0
4.318ValGly: 4.318 ± 0.0
0.72ValHis: 0.72 ± 0.0
7.197ValIle: 7.197 ± 0.0
4.318ValLys: 4.318 ± 0.0
5.757ValLeu: 5.757 ± 0.0
2.519ValMet: 2.519 ± 0.0
5.038ValAsn: 5.038 ± 0.0
3.598ValPro: 3.598 ± 0.0
2.879ValGln: 2.879 ± 0.0
5.757ValArg: 5.757 ± 0.0
8.636ValSer: 8.636 ± 0.0
2.879ValThr: 2.879 ± 0.0
3.958ValVal: 3.958 ± 0.0
0.36ValTrp: 0.36 ± 0.0
4.318ValTyr: 4.318 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.36TrpAla: 0.36 ± 0.0
0.36TrpCys: 0.36 ± 0.0
0.72TrpAsp: 0.72 ± 0.0
0.36TrpGlu: 0.36 ± 0.0
0.72TrpPhe: 0.72 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.36TrpHis: 0.36 ± 0.0
0.72TrpIle: 0.72 ± 0.0
0.72TrpLys: 0.72 ± 0.0
2.159TrpLeu: 2.159 ± 0.0
0.36TrpMet: 0.36 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.72TrpGln: 0.72 ± 0.0
0.36TrpArg: 0.36 ± 0.0
1.08TrpSer: 1.08 ± 0.0
0.72TrpThr: 0.72 ± 0.0
1.439TrpVal: 1.439 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.72TrpTyr: 0.72 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.799TyrAla: 1.799 ± 0.0
1.439TyrCys: 1.439 ± 0.0
3.239TyrAsp: 3.239 ± 0.0
4.318TyrGlu: 4.318 ± 0.0
1.439TyrPhe: 1.439 ± 0.0
2.879TyrGly: 2.879 ± 0.0
1.08TyrHis: 1.08 ± 0.0
2.519TyrIle: 2.519 ± 0.0
3.239TyrLys: 3.239 ± 0.0
4.318TyrLeu: 4.318 ± 0.0
0.36TyrMet: 0.36 ± 0.0
3.239TyrAsn: 3.239 ± 0.0
1.799TyrPro: 1.799 ± 0.0
2.159TyrGln: 2.159 ± 0.0
0.72TyrArg: 0.72 ± 0.0
2.879TyrSer: 2.879 ± 0.0
1.439TyrThr: 1.439 ± 0.0
3.239TyrVal: 3.239 ± 0.0
1.08TyrTrp: 1.08 ± 0.0
1.439TyrTyr: 1.439 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2780 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski