Raptor adenovirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Siadenovirus; Raptor siadenovirus A

Average proteome isoelectric point is 6.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 23 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F4MI13|F4MI13_9ADEN Uncharacterized protein OS=Raptor adenovirus 1 OX=1520002 PE=4 SV=1
MM1 pKa = 7.78EE2 pKa = 5.75PRR4 pKa = 11.84DD5 pKa = 3.91LLDD8 pKa = 3.97DD9 pKa = 4.22AEE11 pKa = 4.39RR12 pKa = 11.84TQPVQDD18 pKa = 3.78NKK20 pKa = 10.39VSAVTKK26 pKa = 9.79FYY28 pKa = 11.14SGTKK32 pKa = 8.65RR33 pKa = 11.84TFPLLSEE40 pKa = 4.41DD41 pKa = 3.37AFIFHH46 pKa = 6.1FHH48 pKa = 6.81CGEE51 pKa = 3.97TDD53 pKa = 3.9CILIEE58 pKa = 4.28NYY60 pKa = 8.22GTYY63 pKa = 10.61KK64 pKa = 10.42LSEE67 pKa = 4.37YY68 pKa = 11.17NFGTLLTDD76 pKa = 3.75LGGIVLEE83 pKa = 5.3FKK85 pKa = 11.11LPMHH89 pKa = 7.14SMFQAALACKK99 pKa = 9.51WPTFDD104 pKa = 4.82FEE106 pKa = 4.99YY107 pKa = 10.89VVNVYY112 pKa = 10.54QDD114 pKa = 3.28MRR116 pKa = 11.84VAIYY120 pKa = 8.26EE121 pKa = 4.3LPSTDD126 pKa = 2.48YY127 pKa = 9.4WAPVLSWFAWQCLTNGISFFDD148 pKa = 4.0FVKK151 pKa = 10.89LLGEE155 pKa = 3.91QTGDD159 pKa = 3.32YY160 pKa = 9.12GTVFAA165 pKa = 6.14

Molecular weight: 18.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F4MI08|F4MI08_9ADEN PVIII protein OS=Raptor adenovirus 1 OX=1520002 PE=4 SV=1
MM1 pKa = 7.67LSFFHH6 pKa = 7.11SPVKK10 pKa = 10.22VVKK13 pKa = 10.19AAEE16 pKa = 3.8NSQIKK21 pKa = 10.71GEE23 pKa = 3.89ASQIRR28 pKa = 11.84SITRR32 pKa = 11.84RR33 pKa = 11.84KK34 pKa = 9.45RR35 pKa = 11.84RR36 pKa = 11.84IPGSYY41 pKa = 10.78ANWKK45 pKa = 9.7QYY47 pKa = 11.03GGDD50 pKa = 3.45VKK52 pKa = 10.81EE53 pKa = 4.93AIAVVGRR60 pKa = 11.84QPVCVRR66 pKa = 11.84RR67 pKa = 11.84YY68 pKa = 10.22LIAKK72 pKa = 8.57GIYY75 pKa = 9.47IPPSTINYY83 pKa = 8.08YY84 pKa = 8.95VNKK87 pKa = 10.07HH88 pKa = 4.69FAEE91 pKa = 4.45EE92 pKa = 4.06NSKK95 pKa = 8.86FTLFF99 pKa = 3.99

Molecular weight: 11.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

23

0

23

8162

58

1110

354.9

40.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.807 ± 0.479

1.789 ± 0.332

4.95 ± 0.362

5.648 ± 0.507

4.876 ± 0.299

5.134 ± 0.529

1.801 ± 0.184

6.322 ± 0.401

5.342 ± 0.543

9.458 ± 0.496

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.12 ± 0.135

6.261 ± 0.492

5.709 ± 0.303

4.631 ± 0.328

5.036 ± 0.484

7.094 ± 0.317

6.702 ± 0.442

6.052 ± 0.404

1.103 ± 0.137

4.166 ± 0.3
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski