Amino acid dipepetide frequency for Hubei tetragnatha maxillosa virus 3

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.27AlaAla: 6.27 ± 0.0
0.697AlaCys: 0.697 ± 0.0
2.09AlaAsp: 2.09 ± 0.0
7.663AlaGlu: 7.663 ± 0.0
2.786AlaPhe: 2.786 ± 0.0
6.27AlaGly: 6.27 ± 0.0
1.742AlaHis: 1.742 ± 0.0
3.483AlaIle: 3.483 ± 0.0
6.27AlaLys: 6.27 ± 0.0
4.18AlaLeu: 4.18 ± 0.0
2.09AlaMet: 2.09 ± 0.0
3.135AlaAsn: 3.135 ± 0.0
3.831AlaPro: 3.831 ± 0.0
1.393AlaGln: 1.393 ± 0.0
3.483AlaArg: 3.483 ± 0.0
4.876AlaSer: 4.876 ± 0.0
4.876AlaThr: 4.876 ± 0.0
4.876AlaVal: 4.876 ± 0.0
0.348AlaTrp: 0.348 ± 0.0
2.09AlaTyr: 2.09 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.742CysAla: 1.742 ± 0.0
0.697CysCys: 0.697 ± 0.0
0.697CysAsp: 0.697 ± 0.0
0.348CysGlu: 0.348 ± 0.0
0.0CysPhe: 0.0 ± 0.0
1.742CysGly: 1.742 ± 0.0
1.393CysHis: 1.393 ± 0.0
0.348CysIle: 0.348 ± 0.0
0.348CysLys: 0.348 ± 0.0
2.438CysLeu: 2.438 ± 0.0
0.0CysMet: 0.0 ± 0.0
1.045CysAsn: 1.045 ± 0.0
1.393CysPro: 1.393 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.348CysArg: 0.348 ± 0.0
0.697CysSer: 0.697 ± 0.0
0.697CysThr: 0.697 ± 0.0
0.697CysVal: 0.697 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.045CysTyr: 1.045 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.438AspAla: 2.438 ± 0.0
0.348AspCys: 0.348 ± 0.0
5.921AspAsp: 5.921 ± 0.0
6.618AspGlu: 6.618 ± 0.0
5.225AspPhe: 5.225 ± 0.0
4.18AspGly: 4.18 ± 0.0
0.697AspHis: 0.697 ± 0.0
2.438AspIle: 2.438 ± 0.0
4.876AspLys: 4.876 ± 0.0
3.831AspLeu: 3.831 ± 0.0
1.742AspMet: 1.742 ± 0.0
1.393AspAsn: 1.393 ± 0.0
2.09AspPro: 2.09 ± 0.0
1.742AspGln: 1.742 ± 0.0
1.045AspArg: 1.045 ± 0.0
1.045AspSer: 1.045 ± 0.0
3.135AspThr: 3.135 ± 0.0
3.483AspVal: 3.483 ± 0.0
1.393AspTrp: 1.393 ± 0.0
1.742AspTyr: 1.742 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.438GluAla: 2.438 ± 0.0
1.045GluCys: 1.045 ± 0.0
2.786GluAsp: 2.786 ± 0.0
6.966GluGlu: 6.966 ± 0.0
3.135GluPhe: 3.135 ± 0.0
3.135GluGly: 3.135 ± 0.0
0.697GluHis: 0.697 ± 0.0
3.135GluIle: 3.135 ± 0.0
5.225GluLys: 5.225 ± 0.0
8.011GluLeu: 8.011 ± 0.0
2.786GluMet: 2.786 ± 0.0
2.09GluAsn: 2.09 ± 0.0
1.393GluPro: 1.393 ± 0.0
3.135GluGln: 3.135 ± 0.0
4.876GluArg: 4.876 ± 0.0
5.225GluSer: 5.225 ± 0.0
4.876GluThr: 4.876 ± 0.0
5.921GluVal: 5.921 ± 0.0
1.393GluTrp: 1.393 ± 0.0
2.438GluTyr: 2.438 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
5.573PheAla: 5.573 ± 0.0
0.697PheCys: 0.697 ± 0.0
3.831PheAsp: 3.831 ± 0.0
2.438PheGlu: 2.438 ± 0.0
1.742PhePhe: 1.742 ± 0.0
3.135PheGly: 3.135 ± 0.0
2.786PheHis: 2.786 ± 0.0
2.786PheIle: 2.786 ± 0.0
1.742PheLys: 1.742 ± 0.0
3.831PheLeu: 3.831 ± 0.0
1.045PheMet: 1.045 ± 0.0
3.831PheAsn: 3.831 ± 0.0
0.697PhePro: 0.697 ± 0.0
1.742PheGln: 1.742 ± 0.0
2.786PheArg: 2.786 ± 0.0
3.135PheSer: 3.135 ± 0.0
3.483PheThr: 3.483 ± 0.0
3.483PheVal: 3.483 ± 0.0
1.393PheTrp: 1.393 ± 0.0
1.742PheTyr: 1.742 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.483GlyAla: 3.483 ± 0.0
0.348GlyCys: 0.348 ± 0.0
3.831GlyAsp: 3.831 ± 0.0
2.438GlyGlu: 2.438 ± 0.0
3.831GlyPhe: 3.831 ± 0.0
2.786GlyGly: 2.786 ± 0.0
1.045GlyHis: 1.045 ± 0.0
4.18GlyIle: 4.18 ± 0.0
4.876GlyLys: 4.876 ± 0.0
4.18GlyLeu: 4.18 ± 0.0
1.045GlyMet: 1.045 ± 0.0
3.135GlyAsn: 3.135 ± 0.0
2.09GlyPro: 2.09 ± 0.0
2.786GlyGln: 2.786 ± 0.0
3.831GlyArg: 3.831 ± 0.0
6.27GlySer: 6.27 ± 0.0
4.528GlyThr: 4.528 ± 0.0
6.618GlyVal: 6.618 ± 0.0
1.045GlyTrp: 1.045 ± 0.0
2.09GlyTyr: 2.09 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.393HisAla: 1.393 ± 0.0
1.045HisCys: 1.045 ± 0.0
1.045HisAsp: 1.045 ± 0.0
1.045HisGlu: 1.045 ± 0.0
1.045HisPhe: 1.045 ± 0.0
3.483HisGly: 3.483 ± 0.0
1.742HisHis: 1.742 ± 0.0
1.393HisIle: 1.393 ± 0.0
1.045HisLys: 1.045 ± 0.0
2.09HisLeu: 2.09 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.348HisAsn: 0.348 ± 0.0
1.393HisPro: 1.393 ± 0.0
1.045HisGln: 1.045 ± 0.0
0.697HisArg: 0.697 ± 0.0
1.045HisSer: 1.045 ± 0.0
1.393HisThr: 1.393 ± 0.0
2.786HisVal: 2.786 ± 0.0
0.0HisTrp: 0.0 ± 0.0
2.438HisTyr: 2.438 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
5.921IleAla: 5.921 ± 0.0
0.348IleCys: 0.348 ± 0.0
1.045IleAsp: 1.045 ± 0.0
2.786IleGlu: 2.786 ± 0.0
2.09IlePhe: 2.09 ± 0.0
2.438IleGly: 2.438 ± 0.0
0.348IleHis: 0.348 ± 0.0
1.393IleIle: 1.393 ± 0.0
1.742IleLys: 1.742 ± 0.0
3.831IleLeu: 3.831 ± 0.0
1.045IleMet: 1.045 ± 0.0
1.742IleAsn: 1.742 ± 0.0
5.225IlePro: 5.225 ± 0.0
2.09IleGln: 2.09 ± 0.0
1.742IleArg: 1.742 ± 0.0
3.135IleSer: 3.135 ± 0.0
3.135IleThr: 3.135 ± 0.0
3.483IleVal: 3.483 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.393IleTyr: 1.393 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.18LysAla: 4.18 ± 0.0
1.742LysCys: 1.742 ± 0.0
4.18LysAsp: 4.18 ± 0.0
4.876LysGlu: 4.876 ± 0.0
3.135LysPhe: 3.135 ± 0.0
3.483LysGly: 3.483 ± 0.0
1.742LysHis: 1.742 ± 0.0
2.438LysIle: 2.438 ± 0.0
3.483LysLys: 3.483 ± 0.0
5.225LysLeu: 5.225 ± 0.0
0.0LysMet: 0.0 ± 0.0
2.09LysAsn: 2.09 ± 0.0
2.09LysPro: 2.09 ± 0.0
2.786LysGln: 2.786 ± 0.0
2.09LysArg: 2.09 ± 0.0
3.831LysSer: 3.831 ± 0.0
3.831LysThr: 3.831 ± 0.0
4.528LysVal: 4.528 ± 0.0
1.045LysTrp: 1.045 ± 0.0
3.135LysTyr: 3.135 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.663LeuAla: 7.663 ± 0.0
1.393LeuCys: 1.393 ± 0.0
5.225LeuAsp: 5.225 ± 0.0
4.18LeuGlu: 4.18 ± 0.0
4.18LeuPhe: 4.18 ± 0.0
6.27LeuGly: 6.27 ± 0.0
2.09LeuHis: 2.09 ± 0.0
2.786LeuIle: 2.786 ± 0.0
6.618LeuLys: 6.618 ± 0.0
8.011LeuLeu: 8.011 ± 0.0
1.742LeuMet: 1.742 ± 0.0
4.18LeuAsn: 4.18 ± 0.0
4.18LeuPro: 4.18 ± 0.0
2.786LeuGln: 2.786 ± 0.0
3.831LeuArg: 3.831 ± 0.0
4.876LeuSer: 4.876 ± 0.0
3.135LeuThr: 3.135 ± 0.0
5.573LeuVal: 5.573 ± 0.0
1.393LeuTrp: 1.393 ± 0.0
2.438LeuTyr: 2.438 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.786MetAla: 2.786 ± 0.0
0.0MetCys: 0.0 ± 0.0
2.438MetAsp: 2.438 ± 0.0
0.697MetGlu: 0.697 ± 0.0
0.697MetPhe: 0.697 ± 0.0
0.697MetGly: 0.697 ± 0.0
0.348MetHis: 0.348 ± 0.0
0.697MetIle: 0.697 ± 0.0
2.786MetLys: 2.786 ± 0.0
2.786MetLeu: 2.786 ± 0.0
0.348MetMet: 0.348 ± 0.0
2.09MetAsn: 2.09 ± 0.0
0.348MetPro: 0.348 ± 0.0
1.045MetGln: 1.045 ± 0.0
1.742MetArg: 1.742 ± 0.0
1.393MetSer: 1.393 ± 0.0
3.483MetThr: 3.483 ± 0.0
1.045MetVal: 1.045 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.697MetTyr: 0.697 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.483AsnAla: 3.483 ± 0.0
1.045AsnCys: 1.045 ± 0.0
1.742AsnAsp: 1.742 ± 0.0
1.742AsnGlu: 1.742 ± 0.0
1.393AsnPhe: 1.393 ± 0.0
2.09AsnGly: 2.09 ± 0.0
0.348AsnHis: 0.348 ± 0.0
3.135AsnIle: 3.135 ± 0.0
2.09AsnLys: 2.09 ± 0.0
3.831AsnLeu: 3.831 ± 0.0
0.348AsnMet: 0.348 ± 0.0
1.045AsnAsn: 1.045 ± 0.0
2.09AsnPro: 2.09 ± 0.0
2.09AsnGln: 2.09 ± 0.0
3.483AsnArg: 3.483 ± 0.0
3.135AsnSer: 3.135 ± 0.0
3.483AsnThr: 3.483 ± 0.0
0.697AsnVal: 0.697 ± 0.0
1.393AsnTrp: 1.393 ± 0.0
2.09AsnTyr: 2.09 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.438ProAla: 2.438 ± 0.0
1.393ProCys: 1.393 ± 0.0
1.393ProAsp: 1.393 ± 0.0
3.135ProGlu: 3.135 ± 0.0
2.786ProPhe: 2.786 ± 0.0
3.135ProGly: 3.135 ± 0.0
1.742ProHis: 1.742 ± 0.0
1.045ProIle: 1.045 ± 0.0
1.393ProLys: 1.393 ± 0.0
2.786ProLeu: 2.786 ± 0.0
1.393ProMet: 1.393 ± 0.0
2.09ProAsn: 2.09 ± 0.0
2.786ProPro: 2.786 ± 0.0
1.742ProGln: 1.742 ± 0.0
2.09ProArg: 2.09 ± 0.0
2.438ProSer: 2.438 ± 0.0
3.135ProThr: 3.135 ± 0.0
3.483ProVal: 3.483 ± 0.0
0.697ProTrp: 0.697 ± 0.0
2.786ProTyr: 2.786 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.438GlnAla: 2.438 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.393GlnAsp: 1.393 ± 0.0
3.135GlnGlu: 3.135 ± 0.0
2.09GlnPhe: 2.09 ± 0.0
2.09GlnGly: 2.09 ± 0.0
0.697GlnHis: 0.697 ± 0.0
2.786GlnIle: 2.786 ± 0.0
2.09GlnLys: 2.09 ± 0.0
3.483GlnLeu: 3.483 ± 0.0
1.393GlnMet: 1.393 ± 0.0
1.045GlnAsn: 1.045 ± 0.0
1.393GlnPro: 1.393 ± 0.0
1.742GlnGln: 1.742 ± 0.0
2.786GlnArg: 2.786 ± 0.0
1.045GlnSer: 1.045 ± 0.0
2.438GlnThr: 2.438 ± 0.0
2.09GlnVal: 2.09 ± 0.0
1.045GlnTrp: 1.045 ± 0.0
0.697GlnTyr: 0.697 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.438ArgAla: 2.438 ± 0.0
1.045ArgCys: 1.045 ± 0.0
3.135ArgAsp: 3.135 ± 0.0
2.438ArgGlu: 2.438 ± 0.0
2.438ArgPhe: 2.438 ± 0.0
3.135ArgGly: 3.135 ± 0.0
2.438ArgHis: 2.438 ± 0.0
4.18ArgIle: 4.18 ± 0.0
2.438ArgLys: 2.438 ± 0.0
4.876ArgLeu: 4.876 ± 0.0
1.742ArgMet: 1.742 ± 0.0
1.742ArgAsn: 1.742 ± 0.0
2.09ArgPro: 2.09 ± 0.0
1.393ArgGln: 1.393 ± 0.0
3.483ArgArg: 3.483 ± 0.0
2.786ArgSer: 2.786 ± 0.0
3.135ArgThr: 3.135 ± 0.0
4.528ArgVal: 4.528 ± 0.0
0.697ArgTrp: 0.697 ± 0.0
2.438ArgTyr: 2.438 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.483SerAla: 3.483 ± 0.0
1.045SerCys: 1.045 ± 0.0
5.225SerAsp: 5.225 ± 0.0
6.966SerGlu: 6.966 ± 0.0
5.225SerPhe: 5.225 ± 0.0
6.27SerGly: 6.27 ± 0.0
1.742SerHis: 1.742 ± 0.0
2.438SerIle: 2.438 ± 0.0
1.742SerLys: 1.742 ± 0.0
3.135SerLeu: 3.135 ± 0.0
1.045SerMet: 1.045 ± 0.0
2.438SerAsn: 2.438 ± 0.0
2.09SerPro: 2.09 ± 0.0
2.09SerGln: 2.09 ± 0.0
2.438SerArg: 2.438 ± 0.0
5.225SerSer: 5.225 ± 0.0
3.831SerThr: 3.831 ± 0.0
5.921SerVal: 5.921 ± 0.0
0.348SerTrp: 0.348 ± 0.0
1.742SerTyr: 1.742 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
7.663ThrAla: 7.663 ± 0.0
1.393ThrCys: 1.393 ± 0.0
4.18ThrAsp: 4.18 ± 0.0
5.573ThrGlu: 5.573 ± 0.0
3.483ThrPhe: 3.483 ± 0.0
2.09ThrGly: 2.09 ± 0.0
1.742ThrHis: 1.742 ± 0.0
1.742ThrIle: 1.742 ± 0.0
5.225ThrLys: 5.225 ± 0.0
4.528ThrLeu: 4.528 ± 0.0
2.438ThrMet: 2.438 ± 0.0
2.09ThrAsn: 2.09 ± 0.0
1.742ThrPro: 1.742 ± 0.0
2.438ThrGln: 2.438 ± 0.0
4.876ThrArg: 4.876 ± 0.0
4.18ThrSer: 4.18 ± 0.0
3.483ThrThr: 3.483 ± 0.0
5.225ThrVal: 5.225 ± 0.0
1.393ThrTrp: 1.393 ± 0.0
1.393ThrTyr: 1.393 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.225ValAla: 5.225 ± 0.0
1.045ValCys: 1.045 ± 0.0
3.483ValAsp: 3.483 ± 0.0
4.876ValGlu: 4.876 ± 0.0
3.483ValPhe: 3.483 ± 0.0
4.876ValGly: 4.876 ± 0.0
2.09ValHis: 2.09 ± 0.0
3.135ValIle: 3.135 ± 0.0
4.18ValLys: 4.18 ± 0.0
5.225ValLeu: 5.225 ± 0.0
3.831ValMet: 3.831 ± 0.0
3.483ValAsn: 3.483 ± 0.0
4.18ValPro: 4.18 ± 0.0
1.742ValGln: 1.742 ± 0.0
3.483ValArg: 3.483 ± 0.0
5.573ValSer: 5.573 ± 0.0
5.573ValThr: 5.573 ± 0.0
5.225ValVal: 5.225 ± 0.0
1.393ValTrp: 1.393 ± 0.0
1.045ValTyr: 1.045 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.697TrpAsp: 0.697 ± 0.0
1.742TrpGlu: 1.742 ± 0.0
1.393TrpPhe: 1.393 ± 0.0
0.348TrpGly: 0.348 ± 0.0
0.348TrpHis: 0.348 ± 0.0
1.045TrpIle: 1.045 ± 0.0
0.697TrpLys: 0.697 ± 0.0
1.742TrpLeu: 1.742 ± 0.0
0.348TrpMet: 0.348 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
1.045TrpPro: 1.045 ± 0.0
0.348TrpGln: 0.348 ± 0.0
1.045TrpArg: 1.045 ± 0.0
1.393TrpSer: 1.393 ± 0.0
2.786TrpThr: 2.786 ± 0.0
0.697TrpVal: 0.697 ± 0.0
0.348TrpTrp: 0.348 ± 0.0
0.348TrpTyr: 0.348 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.393TyrAla: 1.393 ± 0.0
0.348TyrCys: 0.348 ± 0.0
1.045TyrAsp: 1.045 ± 0.0
1.045TyrGlu: 1.045 ± 0.0
1.742TyrPhe: 1.742 ± 0.0
2.786TyrGly: 2.786 ± 0.0
0.697TyrHis: 0.697 ± 0.0
0.348TyrIle: 0.348 ± 0.0
1.045TyrLys: 1.045 ± 0.0
4.528TyrLeu: 4.528 ± 0.0
1.393TyrMet: 1.393 ± 0.0
2.09TyrAsn: 2.09 ± 0.0
1.742TyrPro: 1.742 ± 0.0
1.742TyrGln: 1.742 ± 0.0
2.438TyrArg: 2.438 ± 0.0
3.135TyrSer: 3.135 ± 0.0
2.438TyrThr: 2.438 ± 0.0
2.786TyrVal: 2.786 ± 0.0
1.045TyrTrp: 1.045 ± 0.0
1.742TyrTyr: 1.742 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2872 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski