Amino acid dipepetide frequency for Beihai uca arcuata virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
13.629AlaAla: 13.629 ± 0.0
0.0AlaCys: 0.0 ± 0.0
3.534AlaAsp: 3.534 ± 0.0
3.029AlaGlu: 3.029 ± 0.0
2.019AlaPhe: 2.019 ± 0.0
10.096AlaGly: 10.096 ± 0.0
1.01AlaHis: 1.01 ± 0.0
3.534AlaIle: 3.534 ± 0.0
5.048AlaLys: 5.048 ± 0.0
5.553AlaLeu: 5.553 ± 0.0
1.514AlaMet: 1.514 ± 0.0
2.524AlaAsn: 2.524 ± 0.0
8.582AlaPro: 8.582 ± 0.0
3.029AlaGln: 3.029 ± 0.0
3.534AlaArg: 3.534 ± 0.0
7.067AlaSer: 7.067 ± 0.0
6.562AlaThr: 6.562 ± 0.0
7.067AlaVal: 7.067 ± 0.0
3.029AlaTrp: 3.029 ± 0.0
1.514AlaTyr: 1.514 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.514CysAla: 1.514 ± 0.0
0.505CysCys: 0.505 ± 0.0
0.505CysAsp: 0.505 ± 0.0
1.01CysGlu: 1.01 ± 0.0
0.0CysPhe: 0.0 ± 0.0
0.0CysGly: 0.0 ± 0.0
0.505CysHis: 0.505 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.505CysLys: 0.505 ± 0.0
1.514CysLeu: 1.514 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.505CysAsn: 0.505 ± 0.0
0.0CysPro: 0.0 ± 0.0
0.505CysGln: 0.505 ± 0.0
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.505CysThr: 0.505 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.505CysTrp: 0.505 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
7.067AspAla: 7.067 ± 0.0
0.0AspCys: 0.0 ± 0.0
3.534AspAsp: 3.534 ± 0.0
4.543AspGlu: 4.543 ± 0.0
1.514AspPhe: 1.514 ± 0.0
2.524AspGly: 2.524 ± 0.0
0.505AspHis: 0.505 ± 0.0
3.029AspIle: 3.029 ± 0.0
3.534AspLys: 3.534 ± 0.0
3.534AspLeu: 3.534 ± 0.0
1.01AspMet: 1.01 ± 0.0
3.534AspAsn: 3.534 ± 0.0
3.534AspPro: 3.534 ± 0.0
1.01AspGln: 1.01 ± 0.0
2.524AspArg: 2.524 ± 0.0
1.514AspSer: 1.514 ± 0.0
4.038AspThr: 4.038 ± 0.0
5.048AspVal: 5.048 ± 0.0
4.038AspTrp: 4.038 ± 0.0
2.019AspTyr: 2.019 ± 0.0
0.505AspXaa: 0.505 ± 0.0
Glu
3.534GluAla: 3.534 ± 0.0
0.505GluCys: 0.505 ± 0.0
4.543GluAsp: 4.543 ± 0.0
4.543GluGlu: 4.543 ± 0.0
1.01GluPhe: 1.01 ± 0.0
3.534GluGly: 3.534 ± 0.0
2.524GluHis: 2.524 ± 0.0
1.01GluIle: 1.01 ± 0.0
5.048GluLys: 5.048 ± 0.0
4.038GluLeu: 4.038 ± 0.0
0.505GluMet: 0.505 ± 0.0
1.01GluAsn: 1.01 ± 0.0
1.514GluPro: 1.514 ± 0.0
2.019GluGln: 2.019 ± 0.0
1.514GluArg: 1.514 ± 0.0
1.514GluSer: 1.514 ± 0.0
1.01GluThr: 1.01 ± 0.0
3.534GluVal: 3.534 ± 0.0
3.534GluTrp: 3.534 ± 0.0
1.514GluTyr: 1.514 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.01PheAla: 1.01 ± 0.0
0.505PheCys: 0.505 ± 0.0
3.534PheAsp: 3.534 ± 0.0
1.01PheGlu: 1.01 ± 0.0
1.514PhePhe: 1.514 ± 0.0
3.029PheGly: 3.029 ± 0.0
0.0PheHis: 0.0 ± 0.0
1.01PheIle: 1.01 ± 0.0
3.534PheLys: 3.534 ± 0.0
2.524PheLeu: 2.524 ± 0.0
0.0PheMet: 0.0 ± 0.0
0.0PheAsn: 0.0 ± 0.0
0.0PhePro: 0.0 ± 0.0
0.505PheGln: 0.505 ± 0.0
0.505PheArg: 0.505 ± 0.0
2.019PheSer: 2.019 ± 0.0
0.505PheThr: 0.505 ± 0.0
0.505PheVal: 0.505 ± 0.0
0.0PheTrp: 0.0 ± 0.0
0.505PheTyr: 0.505 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
6.562GlyAla: 6.562 ± 0.0
0.0GlyCys: 0.0 ± 0.0
3.534GlyAsp: 3.534 ± 0.0
2.524GlyGlu: 2.524 ± 0.0
2.524GlyPhe: 2.524 ± 0.0
7.067GlyGly: 7.067 ± 0.0
1.01GlyHis: 1.01 ± 0.0
7.067GlyIle: 7.067 ± 0.0
4.038GlyLys: 4.038 ± 0.0
7.572GlyLeu: 7.572 ± 0.0
4.038GlyMet: 4.038 ± 0.0
4.543GlyAsn: 4.543 ± 0.0
2.524GlyPro: 2.524 ± 0.0
4.038GlyGln: 4.038 ± 0.0
7.572GlyArg: 7.572 ± 0.0
6.562GlySer: 6.562 ± 0.0
8.077GlyThr: 8.077 ± 0.0
4.038GlyVal: 4.038 ± 0.0
7.572GlyTrp: 7.572 ± 0.0
2.524GlyTyr: 2.524 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.01HisAla: 1.01 ± 0.0
1.01HisCys: 1.01 ± 0.0
0.505HisAsp: 0.505 ± 0.0
0.505HisGlu: 0.505 ± 0.0
0.0HisPhe: 0.0 ± 0.0
0.505HisGly: 0.505 ± 0.0
0.505HisHis: 0.505 ± 0.0
0.0HisIle: 0.0 ± 0.0
0.0HisLys: 0.0 ± 0.0
1.514HisLeu: 1.514 ± 0.0
0.505HisMet: 0.505 ± 0.0
0.505HisAsn: 0.505 ± 0.0
0.505HisPro: 0.505 ± 0.0
1.01HisGln: 1.01 ± 0.0
0.505HisArg: 0.505 ± 0.0
0.505HisSer: 0.505 ± 0.0
1.514HisThr: 1.514 ± 0.0
1.01HisVal: 1.01 ± 0.0
0.505HisTrp: 0.505 ± 0.0
0.505HisTyr: 0.505 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.534IleAla: 3.534 ± 0.0
2.019IleCys: 2.019 ± 0.0
3.029IleAsp: 3.029 ± 0.0
3.029IleGlu: 3.029 ± 0.0
1.01IlePhe: 1.01 ± 0.0
4.543IleGly: 4.543 ± 0.0
0.505IleHis: 0.505 ± 0.0
3.534IleIle: 3.534 ± 0.0
2.524IleLys: 2.524 ± 0.0
3.029IleLeu: 3.029 ± 0.0
1.01IleMet: 1.01 ± 0.0
1.01IleAsn: 1.01 ± 0.0
2.019IlePro: 2.019 ± 0.0
0.505IleGln: 0.505 ± 0.0
4.543IleArg: 4.543 ± 0.0
4.038IleSer: 4.038 ± 0.0
5.048IleThr: 5.048 ± 0.0
5.048IleVal: 5.048 ± 0.0
0.505IleTrp: 0.505 ± 0.0
0.505IleTyr: 0.505 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.553LysAla: 5.553 ± 0.0
0.505LysCys: 0.505 ± 0.0
4.038LysAsp: 4.038 ± 0.0
3.029LysGlu: 3.029 ± 0.0
2.019LysPhe: 2.019 ± 0.0
4.543LysGly: 4.543 ± 0.0
1.514LysHis: 1.514 ± 0.0
3.029LysIle: 3.029 ± 0.0
1.514LysLys: 1.514 ± 0.0
6.562LysLeu: 6.562 ± 0.0
0.505LysMet: 0.505 ± 0.0
2.019LysAsn: 2.019 ± 0.0
2.524LysPro: 2.524 ± 0.0
1.01LysGln: 1.01 ± 0.0
3.534LysArg: 3.534 ± 0.0
2.524LysSer: 2.524 ± 0.0
2.019LysThr: 2.019 ± 0.0
4.038LysVal: 4.038 ± 0.0
3.029LysTrp: 3.029 ± 0.0
2.524LysTyr: 2.524 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.067LeuAla: 7.067 ± 0.0
0.0LeuCys: 0.0 ± 0.0
5.048LeuAsp: 5.048 ± 0.0
2.524LeuGlu: 2.524 ± 0.0
2.524LeuPhe: 2.524 ± 0.0
12.115LeuGly: 12.115 ± 0.0
0.505LeuHis: 0.505 ± 0.0
4.038LeuIle: 4.038 ± 0.0
5.048LeuLys: 5.048 ± 0.0
5.048LeuLeu: 5.048 ± 0.0
2.019LeuMet: 2.019 ± 0.0
2.019LeuAsn: 2.019 ± 0.0
3.029LeuPro: 3.029 ± 0.0
2.524LeuGln: 2.524 ± 0.0
4.543LeuArg: 4.543 ± 0.0
4.543LeuSer: 4.543 ± 0.0
3.534LeuThr: 3.534 ± 0.0
7.067LeuVal: 7.067 ± 0.0
3.534LeuTrp: 3.534 ± 0.0
3.029LeuTyr: 3.029 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.524MetAla: 2.524 ± 0.0
0.505MetCys: 0.505 ± 0.0
2.019MetAsp: 2.019 ± 0.0
1.514MetGlu: 1.514 ± 0.0
0.505MetPhe: 0.505 ± 0.0
4.038MetGly: 4.038 ± 0.0
0.505MetHis: 0.505 ± 0.0
1.01MetIle: 1.01 ± 0.0
1.514MetLys: 1.514 ± 0.0
2.019MetLeu: 2.019 ± 0.0
1.514MetMet: 1.514 ± 0.0
1.01MetAsn: 1.01 ± 0.0
1.01MetPro: 1.01 ± 0.0
0.505MetGln: 0.505 ± 0.0
1.01MetArg: 1.01 ± 0.0
1.514MetSer: 1.514 ± 0.0
2.524MetThr: 2.524 ± 0.0
2.019MetVal: 2.019 ± 0.0
2.019MetTrp: 2.019 ± 0.0
0.505MetTyr: 0.505 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
5.048AsnAla: 5.048 ± 0.0
0.0AsnCys: 0.0 ± 0.0
3.029AsnAsp: 3.029 ± 0.0
0.505AsnGlu: 0.505 ± 0.0
0.505AsnPhe: 0.505 ± 0.0
2.524AsnGly: 2.524 ± 0.0
0.505AsnHis: 0.505 ± 0.0
2.524AsnIle: 2.524 ± 0.0
0.505AsnLys: 0.505 ± 0.0
3.534AsnLeu: 3.534 ± 0.0
2.019AsnMet: 2.019 ± 0.0
1.514AsnAsn: 1.514 ± 0.0
2.019AsnPro: 2.019 ± 0.0
1.01AsnGln: 1.01 ± 0.0
2.524AsnArg: 2.524 ± 0.0
3.534AsnSer: 3.534 ± 0.0
5.048AsnThr: 5.048 ± 0.0
2.019AsnVal: 2.019 ± 0.0
1.514AsnTrp: 1.514 ± 0.0
0.505AsnTyr: 0.505 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.038ProAla: 4.038 ± 0.0
0.505ProCys: 0.505 ± 0.0
3.534ProAsp: 3.534 ± 0.0
2.524ProGlu: 2.524 ± 0.0
0.505ProPhe: 0.505 ± 0.0
5.553ProGly: 5.553 ± 0.0
0.0ProHis: 0.0 ± 0.0
2.019ProIle: 2.019 ± 0.0
1.514ProLys: 1.514 ± 0.0
3.029ProLeu: 3.029 ± 0.0
2.524ProMet: 2.524 ± 0.0
2.019ProAsn: 2.019 ± 0.0
3.534ProPro: 3.534 ± 0.0
0.0ProGln: 0.0 ± 0.0
3.029ProArg: 3.029 ± 0.0
1.514ProSer: 1.514 ± 0.0
2.524ProThr: 2.524 ± 0.0
2.019ProVal: 2.019 ± 0.0
3.029ProTrp: 3.029 ± 0.0
1.01ProTyr: 1.01 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.534GlnAla: 3.534 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.01GlnAsp: 1.01 ± 0.0
3.029GlnGlu: 3.029 ± 0.0
0.505GlnPhe: 0.505 ± 0.0
2.524GlnGly: 2.524 ± 0.0
1.01GlnHis: 1.01 ± 0.0
0.505GlnIle: 0.505 ± 0.0
1.514GlnLys: 1.514 ± 0.0
0.505GlnLeu: 0.505 ± 0.0
1.01GlnMet: 1.01 ± 0.0
1.514GlnAsn: 1.514 ± 0.0
1.01GlnPro: 1.01 ± 0.0
0.505GlnGln: 0.505 ± 0.0
1.514GlnArg: 1.514 ± 0.0
2.524GlnSer: 2.524 ± 0.0
2.524GlnThr: 2.524 ± 0.0
2.019GlnVal: 2.019 ± 0.0
0.505GlnTrp: 0.505 ± 0.0
0.505GlnTyr: 0.505 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.029ArgAla: 3.029 ± 0.0
0.0ArgCys: 0.0 ± 0.0
2.524ArgAsp: 2.524 ± 0.0
2.019ArgGlu: 2.019 ± 0.0
1.514ArgPhe: 1.514 ± 0.0
5.048ArgGly: 5.048 ± 0.0
0.0ArgHis: 0.0 ± 0.0
4.543ArgIle: 4.543 ± 0.0
4.543ArgLys: 4.543 ± 0.0
6.562ArgLeu: 6.562 ± 0.0
1.01ArgMet: 1.01 ± 0.0
2.019ArgAsn: 2.019 ± 0.0
3.029ArgPro: 3.029 ± 0.0
1.514ArgGln: 1.514 ± 0.0
4.543ArgArg: 4.543 ± 0.0
5.048ArgSer: 5.048 ± 0.0
3.534ArgThr: 3.534 ± 0.0
5.553ArgVal: 5.553 ± 0.0
2.524ArgTrp: 2.524 ± 0.0
3.534ArgTyr: 3.534 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
6.562SerAla: 6.562 ± 0.0
0.0SerCys: 0.0 ± 0.0
3.534SerAsp: 3.534 ± 0.0
4.543SerGlu: 4.543 ± 0.0
0.505SerPhe: 0.505 ± 0.0
7.572SerGly: 7.572 ± 0.0
0.0SerHis: 0.0 ± 0.0
3.029SerIle: 3.029 ± 0.0
5.048SerLys: 5.048 ± 0.0
5.553SerLeu: 5.553 ± 0.0
2.524SerMet: 2.524 ± 0.0
2.524SerAsn: 2.524 ± 0.0
1.01SerPro: 1.01 ± 0.0
1.514SerGln: 1.514 ± 0.0
4.038SerArg: 4.038 ± 0.0
4.038SerSer: 4.038 ± 0.0
3.534SerThr: 3.534 ± 0.0
3.534SerVal: 3.534 ± 0.0
3.029SerTrp: 3.029 ± 0.0
1.514SerTyr: 1.514 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.562ThrAla: 6.562 ± 0.0
0.505ThrCys: 0.505 ± 0.0
2.524ThrAsp: 2.524 ± 0.0
2.019ThrGlu: 2.019 ± 0.0
3.029ThrPhe: 3.029 ± 0.0
7.067ThrGly: 7.067 ± 0.0
0.505ThrHis: 0.505 ± 0.0
6.058ThrIle: 6.058 ± 0.0
2.524ThrLys: 2.524 ± 0.0
5.553ThrLeu: 5.553 ± 0.0
2.019ThrMet: 2.019 ± 0.0
2.524ThrAsn: 2.524 ± 0.0
2.019ThrPro: 2.019 ± 0.0
1.514ThrGln: 1.514 ± 0.0
5.048ThrArg: 5.048 ± 0.0
4.543ThrSer: 4.543 ± 0.0
2.524ThrThr: 2.524 ± 0.0
4.038ThrVal: 4.038 ± 0.0
2.524ThrTrp: 2.524 ± 0.0
1.514ThrTyr: 1.514 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.058ValAla: 6.058 ± 0.0
1.514ValCys: 1.514 ± 0.0
3.534ValAsp: 3.534 ± 0.0
3.029ValGlu: 3.029 ± 0.0
0.505ValPhe: 0.505 ± 0.0
5.553ValGly: 5.553 ± 0.0
1.01ValHis: 1.01 ± 0.0
2.524ValIle: 2.524 ± 0.0
3.534ValLys: 3.534 ± 0.0
6.562ValLeu: 6.562 ± 0.0
4.038ValMet: 4.038 ± 0.0
3.534ValAsn: 3.534 ± 0.0
3.029ValPro: 3.029 ± 0.0
2.019ValGln: 2.019 ± 0.0
6.562ValArg: 6.562 ± 0.0
3.534ValSer: 3.534 ± 0.0
4.543ValThr: 4.543 ± 0.0
5.048ValVal: 5.048 ± 0.0
2.019ValTrp: 2.019 ± 0.0
1.514ValTyr: 1.514 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.514TrpAla: 1.514 ± 0.0
0.0TrpCys: 0.0 ± 0.0
4.038TrpAsp: 4.038 ± 0.0
1.01TrpGlu: 1.01 ± 0.0
0.505TrpPhe: 0.505 ± 0.0
1.514TrpGly: 1.514 ± 0.0
0.505TrpHis: 0.505 ± 0.0
2.524TrpIle: 2.524 ± 0.0
3.534TrpLys: 3.534 ± 0.0
4.038TrpLeu: 4.038 ± 0.0
0.505TrpMet: 0.505 ± 0.0
3.029TrpAsn: 3.029 ± 0.0
2.524TrpPro: 2.524 ± 0.0
2.524TrpGln: 2.524 ± 0.0
4.038TrpArg: 4.038 ± 0.0
4.543TrpSer: 4.543 ± 0.0
3.029TrpThr: 3.029 ± 0.0
5.048TrpVal: 5.048 ± 0.0
2.019TrpTrp: 2.019 ± 0.0
1.514TrpTyr: 1.514 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.524TyrAla: 2.524 ± 0.0
0.0TyrCys: 0.0 ± 0.0
1.01TyrAsp: 1.01 ± 0.0
2.019TyrGlu: 2.019 ± 0.0
0.505TyrPhe: 0.505 ± 0.0
3.534TyrGly: 3.534 ± 0.0
0.0TyrHis: 0.0 ± 0.0
0.0TyrIle: 0.0 ± 0.0
1.01TyrLys: 1.01 ± 0.0
1.514TyrLeu: 1.514 ± 0.0
1.01TyrMet: 1.01 ± 0.0
3.029TyrAsn: 3.029 ± 0.0
1.01TyrPro: 1.01 ± 0.0
0.505TyrGln: 0.505 ± 0.0
1.01TyrArg: 1.01 ± 0.0
2.524TyrSer: 2.524 ± 0.0
2.019TyrThr: 2.019 ± 0.0
1.01TyrVal: 1.01 ± 0.0
2.524TyrTrp: 2.524 ± 0.0
1.01TyrTyr: 1.01 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.505XaaGly: 0.505 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1982 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski