Solemya velesiana gill symbiont

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Gammaproteobacteria incertae sedis; sulfur-oxidizing symbionts

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2304 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1T2KSF8|A0A1T2KSF8_9GAMM Uncharacterized protein OS=Solemya velesiana gill symbiont OX=1918948 GN=BOW51_10330 PE=4 SV=1
MM1 pKa = 7.34NIKK4 pKa = 9.76VRR6 pKa = 11.84EE7 pKa = 3.97IMKK10 pKa = 9.76KK11 pKa = 10.31CGIVVCAALYY21 pKa = 10.13IATPAFADD29 pKa = 3.49DD30 pKa = 3.91VEE32 pKa = 5.01IFFNTSNVSGEE43 pKa = 4.6DD44 pKa = 2.94IGDD47 pKa = 3.93PLVMFGLDD55 pKa = 3.35YY56 pKa = 10.8RR57 pKa = 11.84PNVINANLCNAATLAEE73 pKa = 4.14VQNCGWDD80 pKa = 3.71DD81 pKa = 3.68PTTTDD86 pKa = 5.32DD87 pKa = 3.98DD88 pKa = 4.28DD89 pKa = 5.68FYY91 pKa = 11.76AAYY94 pKa = 10.98YY95 pKa = 10.75NVFTNEE101 pKa = 3.69DD102 pKa = 3.54VADD105 pKa = 4.51GSLSFLEE112 pKa = 4.08VLRR115 pKa = 11.84ASLRR119 pKa = 11.84YY120 pKa = 9.72VLGEE124 pKa = 4.07LDD126 pKa = 3.82DD127 pKa = 3.97VRR129 pKa = 11.84IGLMLNHH136 pKa = 6.3AQINNCEE143 pKa = 4.26GASGTAGCSNGGYY156 pKa = 9.52IAMGLLPIDD165 pKa = 4.4AVDD168 pKa = 5.09NSGGWYY174 pKa = 6.55TTWLDD179 pKa = 3.28NDD181 pKa = 3.79GDD183 pKa = 4.35GVHH186 pKa = 7.15DD187 pKa = 4.42VDD189 pKa = 6.02AGDD192 pKa = 5.15DD193 pKa = 3.78PSTGLNILDD202 pKa = 4.31GKK204 pKa = 10.01LASILDD210 pKa = 4.09LGTGAGAHH218 pKa = 5.84SNQGKK223 pKa = 8.86EE224 pKa = 4.4LYY226 pKa = 10.32FEE228 pKa = 4.87LYY230 pKa = 9.98RR231 pKa = 11.84YY232 pKa = 9.85LRR234 pKa = 11.84GWDD237 pKa = 3.11IYY239 pKa = 10.69NGHH242 pKa = 6.46VGYY245 pKa = 11.0ADD247 pKa = 3.48YY248 pKa = 11.14DD249 pKa = 3.95DD250 pKa = 6.02RR251 pKa = 11.84CDD253 pKa = 4.71EE254 pKa = 5.55DD255 pKa = 5.56NLDD258 pKa = 4.53DD259 pKa = 5.12DD260 pKa = 4.78TMPSCFDD267 pKa = 3.1RR268 pKa = 11.84RR269 pKa = 11.84GNPEE273 pKa = 4.95DD274 pKa = 5.59DD275 pKa = 4.52DD276 pKa = 5.5DD277 pKa = 4.77YY278 pKa = 11.84PAIAWDD284 pKa = 3.58ATTVGDD290 pKa = 3.81VGIGATAPDD299 pKa = 4.27YY300 pKa = 10.73PVEE303 pKa = 4.11EE304 pKa = 4.77AGNTEE309 pKa = 4.48YY310 pKa = 11.2YY311 pKa = 10.86SPFEE315 pKa = 4.42DD316 pKa = 4.19QSLICSGVYY325 pKa = 10.31AINFMFGVSNQDD337 pKa = 2.84NDD339 pKa = 3.6SDD341 pKa = 5.32NEE343 pKa = 4.1IEE345 pKa = 5.85DD346 pKa = 4.72DD347 pKa = 4.33DD348 pKa = 5.45AGQISAEE355 pKa = 4.07SAGMVEE361 pKa = 5.54LDD363 pKa = 3.59GSDD366 pKa = 4.57PIDD369 pKa = 3.15ISGNRR374 pKa = 11.84NEE376 pKa = 4.65FGTLIEE382 pKa = 4.03WLYY385 pKa = 10.44EE386 pKa = 4.2GSDD389 pKa = 3.54GSPRR393 pKa = 11.84DD394 pKa = 3.59LSDD397 pKa = 3.22LAGVQNVTSYY407 pKa = 11.42FMYY410 pKa = 10.24KK411 pKa = 10.69GNVQNTMNGYY421 pKa = 9.51AVSGGSGQAYY431 pKa = 8.74EE432 pKa = 4.61VLDD435 pKa = 4.31DD436 pKa = 4.41PKK438 pKa = 11.85AMVDD442 pKa = 3.83TITNIFKK449 pKa = 10.63EE450 pKa = 4.17ILRR453 pKa = 11.84QNTTFEE459 pKa = 4.31APAVTVNSYY468 pKa = 10.73NRR470 pKa = 11.84LTHH473 pKa = 6.79RR474 pKa = 11.84DD475 pKa = 3.57EE476 pKa = 5.45LFFALFSQEE485 pKa = 4.06EE486 pKa = 4.22HH487 pKa = 6.26QNWPGNLKK495 pKa = 10.17KK496 pKa = 10.91YY497 pKa = 10.52KK498 pKa = 10.16LGEE501 pKa = 3.91ITTEE505 pKa = 3.73VCTDD509 pKa = 3.72LNGDD513 pKa = 4.34GDD515 pKa = 4.07TTDD518 pKa = 3.69PGEE521 pKa = 4.53CVTEE525 pKa = 3.97PVQRR529 pKa = 11.84LVDD532 pKa = 3.73QNDD535 pKa = 3.41NEE537 pKa = 4.84AVNQSDD543 pKa = 4.33GVFKK547 pKa = 10.58ATTCSFWSNCSIDD560 pKa = 3.72RR561 pKa = 11.84DD562 pKa = 3.79NDD564 pKa = 3.25GTADD568 pKa = 3.69ADD570 pKa = 3.84GDD572 pKa = 3.93IVEE575 pKa = 4.49WGGAAEE581 pKa = 5.05EE582 pKa = 4.32ITLSRR587 pKa = 11.84TLYY590 pKa = 10.2TYY592 pKa = 10.6IGTDD596 pKa = 3.0RR597 pKa = 11.84YY598 pKa = 10.45AVHH601 pKa = 7.31EE602 pKa = 4.45DD603 pKa = 3.29TSQITHH609 pKa = 5.93EE610 pKa = 4.4MLNVSLDD617 pKa = 3.67EE618 pKa = 4.46TSVHH622 pKa = 6.82AGDD625 pKa = 5.88DD626 pKa = 3.56ICDD629 pKa = 3.4VDD631 pKa = 4.45GDD633 pKa = 3.97SDD635 pKa = 4.62GDD637 pKa = 4.06FEE639 pKa = 5.01CVDD642 pKa = 3.47MDD644 pKa = 4.56GDD646 pKa = 3.99GDD648 pKa = 4.72ADD650 pKa = 4.03STDD653 pKa = 3.3HH654 pKa = 7.73DD655 pKa = 4.85LLRR658 pKa = 11.84EE659 pKa = 4.22DD660 pKa = 4.84LLQIARR666 pKa = 11.84SYY668 pKa = 11.3DD669 pKa = 3.53PEE671 pKa = 4.33TGEE674 pKa = 4.26VLQNMGDD681 pKa = 4.24PIHH684 pKa = 6.84ARR686 pKa = 11.84PAVIEE691 pKa = 3.92YY692 pKa = 10.43DD693 pKa = 3.52ADD695 pKa = 3.85LSNQGACPDD704 pKa = 3.94LRR706 pKa = 11.84IAMTTNEE713 pKa = 4.4GQFHH717 pKa = 7.2LIDD720 pKa = 4.26AGGDD724 pKa = 3.63SGCTDD729 pKa = 2.95NDD731 pKa = 3.82ANVGGTEE738 pKa = 4.19VVSFMPEE745 pKa = 3.4EE746 pKa = 4.49LLPQLKK752 pKa = 9.35QVNGPITVEE761 pKa = 4.02GTGQTRR767 pKa = 11.84FNTYY771 pKa = 10.49GLDD774 pKa = 3.47GSPVVWRR781 pKa = 11.84YY782 pKa = 9.93DD783 pKa = 3.12ADD785 pKa = 4.68AGDD788 pKa = 3.62GTARR792 pKa = 11.84DD793 pKa = 3.71GVINYY798 pKa = 8.94GADD801 pKa = 3.33SDD803 pKa = 4.09EE804 pKa = 4.59DD805 pKa = 3.74FVYY808 pKa = 10.84LFLTQRR814 pKa = 11.84RR815 pKa = 11.84GGKK818 pKa = 9.85GIWALDD824 pKa = 3.34ITNPTSPEE832 pKa = 3.99LMWKK836 pKa = 9.39VWDD839 pKa = 4.14GDD841 pKa = 3.88LTSVNGTSAADD852 pKa = 3.57VYY854 pKa = 11.57SEE856 pKa = 5.77LGQTWSTPKK865 pKa = 9.25LTKK868 pKa = 10.35IKK870 pKa = 10.65DD871 pKa = 3.41GEE873 pKa = 4.08YY874 pKa = 10.77DD875 pKa = 3.09RR876 pKa = 11.84GVLVFGGGYY885 pKa = 10.73DD886 pKa = 3.71PDD888 pKa = 3.66QDD890 pKa = 3.8DD891 pKa = 5.14AYY893 pKa = 11.31SFSDD897 pKa = 3.36TQGRR901 pKa = 11.84AIYY904 pKa = 10.53VVDD907 pKa = 4.95AYY909 pKa = 9.81TGEE912 pKa = 4.28PLWTVSGEE920 pKa = 4.25AASTTPTQPSGGASGTMLIPEE941 pKa = 4.72MDD943 pKa = 3.33NSIPAEE949 pKa = 4.06VQPADD954 pKa = 3.9IDD956 pKa = 3.81SDD958 pKa = 4.41GYY960 pKa = 11.04LDD962 pKa = 4.94RR963 pKa = 11.84IYY965 pKa = 11.18AVDD968 pKa = 3.33VVGRR972 pKa = 11.84VFRR975 pKa = 11.84IDD977 pKa = 5.0FDD979 pKa = 3.67ILPNGDD985 pKa = 3.57STSTQMYY992 pKa = 8.52GGGMVAALNDD1002 pKa = 3.78SSCDD1006 pKa = 3.33EE1007 pKa = 4.24EE1008 pKa = 6.17APTDD1012 pKa = 4.01GVADD1016 pKa = 3.61ACHH1019 pKa = 6.02RR1020 pKa = 11.84RR1021 pKa = 11.84FYY1023 pKa = 10.94NKK1025 pKa = 9.32PDD1027 pKa = 3.26VAVMVGYY1034 pKa = 8.61PAAPYY1039 pKa = 9.18VQVAVGSGYY1048 pKa = 10.22RR1049 pKa = 11.84AWPASVSGIQDD1060 pKa = 3.31RR1061 pKa = 11.84FYY1063 pKa = 11.69VLFDD1067 pKa = 3.95EE1068 pKa = 5.37NVIDD1072 pKa = 4.33PLLSSVYY1079 pKa = 9.13GTGAGEE1085 pKa = 4.1QYY1087 pKa = 10.81HH1088 pKa = 5.12WTEE1091 pKa = 5.01DD1092 pKa = 3.24SDD1094 pKa = 4.56LANLTDD1100 pKa = 3.4IPGDD1104 pKa = 3.41VSDD1107 pKa = 4.3YY1108 pKa = 11.51SGAQTAAEE1116 pKa = 3.88TALGNKK1122 pKa = 8.96HH1123 pKa = 5.02GWYY1126 pKa = 10.35FNLEE1130 pKa = 4.14LTTDD1134 pKa = 3.15AGGTVTSHH1142 pKa = 6.36EE1143 pKa = 4.54KK1144 pKa = 10.62VLSDD1148 pKa = 3.17SVTFNGLILFTTYY1161 pKa = 9.86IRR1163 pKa = 11.84SSEE1166 pKa = 4.17DD1167 pKa = 3.2EE1168 pKa = 4.54ANVCEE1173 pKa = 4.29PSLGSGRR1180 pKa = 11.84FYY1182 pKa = 11.31AVNAFNGLPVGDD1194 pKa = 4.02INQGVFFTEE1203 pKa = 3.84DD1204 pKa = 2.94TARR1207 pKa = 11.84SDD1209 pKa = 3.27FSEE1212 pKa = 4.06ADD1214 pKa = 3.04RR1215 pKa = 11.84YY1216 pKa = 10.21MNLGRR1221 pKa = 11.84KK1222 pKa = 8.66GIPTTPQIILTDD1234 pKa = 3.56EE1235 pKa = 4.53GPRR1238 pKa = 11.84VIVTTEE1244 pKa = 4.69LIPEE1248 pKa = 4.43GLLDD1252 pKa = 4.61SDD1254 pKa = 5.07LFSKK1258 pKa = 10.21KK1259 pKa = 7.04WWLDD1263 pKa = 3.16AKK1265 pKa = 10.96

Molecular weight: 137.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1T2KXJ6|A0A1T2KXJ6_9GAMM Phage-tail_3 domain-containing protein OS=Solemya velesiana gill symbiont OX=1918948 GN=BOW51_02575 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLKK11 pKa = 10.08RR12 pKa = 11.84ARR14 pKa = 11.84THH16 pKa = 5.92GFRR19 pKa = 11.84ARR21 pKa = 11.84MATRR25 pKa = 11.84NGRR28 pKa = 11.84KK29 pKa = 9.4VINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.1GRR39 pKa = 11.84ARR41 pKa = 11.84LTPP44 pKa = 3.93

Molecular weight: 5.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2304

0

2304

693604

31

15124

301.0

33.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.078 ± 0.056

0.995 ± 0.027

5.965 ± 0.113

7.245 ± 0.056

3.664 ± 0.036

7.841 ± 0.084

2.266 ± 0.034

5.786 ± 0.039

4.354 ± 0.07

10.475 ± 0.077

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.733 ± 0.046

3.323 ± 0.044

4.467 ± 0.044

3.858 ± 0.043

6.088 ± 0.097

5.866 ± 0.042

5.008 ± 0.092

7.148 ± 0.048

1.206 ± 0.021

2.634 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski