Pomona leaf-nosed bat associated polyomavirus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1R3SYE4|A0A1R3SYE4_9POLY Late orf 1 OS=Pomona leaf-nosed bat associated polyomavirus OX=1885565 GN=LO1 PE=4 SV=1
MM1 pKa = 7.63GIVASIVAAVTGVAEE16 pKa = 4.29AVADD20 pKa = 4.0AAATVAGAAGSAAEE34 pKa = 3.91AAATSFEE41 pKa = 4.42LTSSVGEE48 pKa = 4.07AAGDD52 pKa = 3.85TVPLLDD58 pKa = 4.45GEE60 pKa = 4.54EE61 pKa = 4.04EE62 pKa = 4.68TVFDD66 pKa = 4.48SSWAEE71 pKa = 3.39GGYY74 pKa = 10.65ADD76 pKa = 4.74EE77 pKa = 5.39GAVNDD82 pKa = 3.65PWNWEE87 pKa = 4.01MEE89 pKa = 4.34PEE91 pKa = 4.15DD92 pKa = 4.32LATGSGSRR100 pKa = 11.84LSRR103 pKa = 11.84SLATGLAAGAGVAAAAGGLAWAIGSAAASHH133 pKa = 6.33SEE135 pKa = 3.75AGQALLEE142 pKa = 4.21SSQVIQRR149 pKa = 11.84TLEE152 pKa = 4.02EE153 pKa = 4.32EE154 pKa = 4.77GEE156 pKa = 4.34QPSVPDD162 pKa = 3.12IVMGFMTPEE171 pKa = 3.78EE172 pKa = 4.24YY173 pKa = 10.39EE174 pKa = 3.97RR175 pKa = 11.84ALEE178 pKa = 4.05EE179 pKa = 3.59LHH181 pKa = 6.54RR182 pKa = 11.84RR183 pKa = 11.84QVEE186 pKa = 4.43GGFSPDD192 pKa = 3.1SLRR195 pKa = 11.84EE196 pKa = 3.98AEE198 pKa = 4.12NALVYY203 pKa = 10.17IAPGSGIPYY212 pKa = 9.61RR213 pKa = 11.84VPDD216 pKa = 3.58QSLLMDD222 pKa = 4.41MAQSEE227 pKa = 4.65QPAPWFLPGAAGQPMTRR244 pKa = 11.84GMLRR248 pKa = 11.84RR249 pKa = 11.84AAEE252 pKa = 3.98AARR255 pKa = 11.84VIAEE259 pKa = 4.04GAEE262 pKa = 3.85RR263 pKa = 11.84SQVFRR268 pKa = 11.84LSADD272 pKa = 2.92ARR274 pKa = 11.84RR275 pKa = 11.84EE276 pKa = 3.93LARR279 pKa = 11.84SGQALADD286 pKa = 4.22LYY288 pKa = 11.18RR289 pKa = 11.84RR290 pKa = 11.84GLRR293 pKa = 11.84PSDD296 pKa = 3.39LLYY299 pKa = 10.76RR300 pKa = 11.84QVLRR304 pKa = 11.84GNRR307 pKa = 11.84QVQEE311 pKa = 4.41DD312 pKa = 3.41IARR315 pKa = 11.84RR316 pKa = 11.84VAAEE320 pKa = 3.78IAGQALDD327 pKa = 3.53IGIEE331 pKa = 3.88QGQQIVGNLIGSGVIATSLAAALTGAGHH359 pKa = 7.51LLIDD363 pKa = 4.2KK364 pKa = 10.1YY365 pKa = 10.96FGPSLPAGAVQIEE378 pKa = 4.17NDD380 pKa = 4.38AFDD383 pKa = 3.49QAPNIVRR390 pKa = 11.84ADD392 pKa = 3.19GGLWRR397 pKa = 11.84KK398 pKa = 9.4GRR400 pKa = 11.84ASYY403 pKa = 10.51LVEE406 pKa = 3.85EE407 pKa = 4.71EE408 pKa = 4.52GRR410 pKa = 11.84LGTVDD415 pKa = 3.73LSYY418 pKa = 10.96YY419 pKa = 10.85APEE422 pKa = 4.01TTNRR426 pKa = 11.84GLPSTEE432 pKa = 3.8PWFHH436 pKa = 6.72FPPRR440 pKa = 11.84SPTQLQNLEE449 pKa = 4.38MYY451 pKa = 10.63LKK453 pKa = 10.75NNWGGEE459 pKa = 3.92NTYY462 pKa = 9.75YY463 pKa = 10.66QPTGEE468 pKa = 4.26GTFLIGDD475 pKa = 4.55LVLQEE480 pKa = 3.69AQYY483 pKa = 10.68RR484 pKa = 11.84RR485 pKa = 11.84KK486 pKa = 9.65NARR489 pKa = 11.84AKK491 pKa = 10.21RR492 pKa = 11.84RR493 pKa = 11.84PRR495 pKa = 11.84DD496 pKa = 3.52TGPGTRR502 pKa = 11.84TKK504 pKa = 9.59RR505 pKa = 11.84TRR507 pKa = 11.84RR508 pKa = 11.84ARR510 pKa = 11.84NN511 pKa = 3.05

Molecular weight: 54.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1R3T5J8|A0A1R3T5J8_9POLY Late orf 2 OS=Pomona leaf-nosed bat associated polyomavirus OX=1885565 GN=LO2 PE=4 SV=1
MM1 pKa = 7.78LLLQLLGLRR10 pKa = 11.84GQLPRR15 pKa = 11.84LLLPALNSLVQLEE28 pKa = 4.58KK29 pKa = 11.22LLGTLFRR36 pKa = 11.84SLMEE40 pKa = 4.02KK41 pKa = 10.1RR42 pKa = 11.84KK43 pKa = 9.91QSSTPLGPRR52 pKa = 11.84GAMLMRR58 pKa = 11.84GLLMTRR64 pKa = 11.84GTGKK68 pKa = 9.78WNLRR72 pKa = 11.84TWLLVVAADD81 pKa = 5.04CPDD84 pKa = 3.77LLLPAWQLGQEE95 pKa = 3.98WQLPRR100 pKa = 11.84GAWPGQLVRR109 pKa = 11.84LLLLILRR116 pKa = 11.84LVKK119 pKa = 10.4PSLRR123 pKa = 11.84ALKK126 pKa = 10.49

Molecular weight: 14.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1645

44

616

329.0

36.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.119 ± 2.208

1.337 ± 0.511

4.681 ± 0.798

6.261 ± 1.056

4.134 ± 1.108

8.693 ± 1.164

1.824 ± 0.688

3.04 ± 0.303

4.012 ± 1.096

11.003 ± 1.878

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.614 ± 0.327

3.647 ± 0.799

6.383 ± 0.739

4.377 ± 0.426

6.261 ± 1.119

7.234 ± 0.578

5.532 ± 0.975

5.775 ± 0.587

1.641 ± 0.353

2.432 ± 0.285
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski