Mycobacterium phage Catera

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Bixzunavirus; Mycobacterium virus Bxz1

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 218 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q19XE3|Q19XE3_9CAUD Uncharacterized protein OS=Mycobacterium phage Catera OX=373404 GN=124 PE=4 SV=1
MM1 pKa = 7.81ADD3 pKa = 3.58YY4 pKa = 11.13ASDD7 pKa = 4.1CPISRR12 pKa = 11.84PVDD15 pKa = 3.83PGWTSDD21 pKa = 2.87WDD23 pKa = 3.89LGGMQWSYY31 pKa = 11.65DD32 pKa = 3.36YY33 pKa = 11.9GMFYY37 pKa = 10.44QPSPDD42 pKa = 3.22EE43 pKa = 4.38LLPLRR48 pKa = 11.84KK49 pKa = 8.64PAQRR53 pKa = 11.84VGEE56 pKa = 4.11

Molecular weight: 6.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q19XL7|Q19XL7_9CAUD Uncharacterized protein OS=Mycobacterium phage Catera OX=373404 GN=45 PE=4 SV=1
MM1 pKa = 7.8ALPALTWRR9 pKa = 11.84TEE11 pKa = 3.84TNGRR15 pKa = 11.84KK16 pKa = 9.09KK17 pKa = 10.65VATTHH22 pKa = 6.57LRR24 pKa = 11.84TTYY27 pKa = 9.89TLEE30 pKa = 5.16KK31 pKa = 9.93IDD33 pKa = 4.01GTWVARR39 pKa = 11.84VTVPQTRR46 pKa = 11.84NRR48 pKa = 11.84IGGGTEE54 pKa = 3.94TLVSGVTFAQARR66 pKa = 11.84AAALDD71 pKa = 3.79DD72 pKa = 3.8YY73 pKa = 11.21KK74 pKa = 11.41RR75 pKa = 11.84NGGNN79 pKa = 3.07

Molecular weight: 8.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

218

0

218

46211

28

1369

212.0

23.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.783 ± 0.26

0.818 ± 0.074

7.115 ± 0.17

6.364 ± 0.164

3.138 ± 0.091

8.095 ± 0.261

2.46 ± 0.139

4.328 ± 0.133

3.819 ± 0.133

7.561 ± 0.205

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.502 ± 0.105

3.391 ± 0.112

5.654 ± 0.174

4.153 ± 0.142

6.84 ± 0.181

5.436 ± 0.14

6.464 ± 0.204

7.117 ± 0.192

1.906 ± 0.089

3.053 ± 0.122
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski