Apis mellifera associated microvirus 11

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3S8UTE7|A0A3S8UTE7_9VIRU Internal scaffolding protein OS=Apis mellifera associated microvirus 11 OX=2494738 PE=4 SV=1
MM1 pKa = 7.58AKK3 pKa = 10.22DD4 pKa = 3.55LSIPDD9 pKa = 4.48RR10 pKa = 11.84IRR12 pKa = 11.84AHH14 pKa = 7.17LSTGPYY20 pKa = 9.1IGRR23 pKa = 11.84EE24 pKa = 3.95DD25 pKa = 3.67WTPALTDD32 pKa = 3.32EE33 pKa = 5.32LNRR36 pKa = 11.84QTAFKK41 pKa = 10.43SDD43 pKa = 3.57QEE45 pKa = 4.29SLTRR49 pKa = 11.84QEE51 pKa = 5.5LGDD54 pKa = 3.67EE55 pKa = 4.3TDD57 pKa = 3.1VNRR60 pKa = 11.84IVQRR64 pKa = 11.84YY65 pKa = 7.71GGNVFQADD73 pKa = 3.66PSRR76 pKa = 11.84YY77 pKa = 9.8GFTDD81 pKa = 3.86DD82 pKa = 4.63RR83 pKa = 11.84VDD85 pKa = 3.64YY86 pKa = 11.09QKK88 pKa = 11.36LLEE91 pKa = 4.3LRR93 pKa = 11.84EE94 pKa = 4.19GAAEE98 pKa = 4.05AFYY101 pKa = 11.1ALPEE105 pKa = 5.05DD106 pKa = 3.47IRR108 pKa = 11.84ASIGSVEE115 pKa = 4.53AYY117 pKa = 10.02LALRR121 pKa = 11.84MQDD124 pKa = 2.87VDD126 pKa = 4.06LDD128 pKa = 4.74GILGRR133 pKa = 11.84LEE135 pKa = 4.13AARR138 pKa = 11.84KK139 pKa = 9.69ALDD142 pKa = 3.7EE143 pKa = 4.48PLNPPAEE150 pKa = 4.79PGAGSPPPAAPEE162 pKa = 3.96AARR165 pKa = 11.84SAA167 pKa = 3.68

Molecular weight: 18.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3Q8U5A0|A0A3Q8U5A0_9VIRU Nonstructural protein OS=Apis mellifera associated microvirus 11 OX=2494738 PE=4 SV=1
MM1 pKa = 7.86RR2 pKa = 11.84PQNTSRR8 pKa = 11.84SRR10 pKa = 11.84GANLQRR16 pKa = 11.84AINEE20 pKa = 3.91EE21 pKa = 3.92RR22 pKa = 11.84EE23 pKa = 3.63LRR25 pKa = 11.84ARR27 pKa = 11.84VGAEE31 pKa = 3.8EE32 pKa = 4.24YY33 pKa = 10.97DD34 pKa = 3.44RR35 pKa = 11.84AAAMAEE41 pKa = 3.74DD42 pKa = 4.68RR43 pKa = 11.84NVKK46 pKa = 9.52QCPCYY51 pKa = 10.78ACMIRR56 pKa = 11.84ARR58 pKa = 11.84FRR60 pKa = 11.84DD61 pKa = 4.17TIAAKK66 pKa = 9.86VWSS69 pKa = 3.93

Molecular weight: 7.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1409

69

537

234.8

25.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.13 ± 2.262

0.994 ± 0.473

4.613 ± 1.173

5.678 ± 0.708

3.691 ± 0.651

8.162 ± 0.59

1.419 ± 0.474

4.542 ± 0.568

2.768 ± 0.767

8.091 ± 0.758

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.342 ± 0.551

4.4 ± 0.96

6.104 ± 1.013

4.755 ± 0.457

8.517 ± 1.014

5.607 ± 0.357

5.039 ± 0.746

5.465 ± 0.348

1.561 ± 0.463

3.123 ± 0.514
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski