Mycobacterium celatum

Taxonomy: cellular organisms;

Average proteome isoelectric point is 6.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4310 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1X1RW58|A0A1X1RW58_MYCCE Uncharacterized protein OS=Mycobacterium celatum OX=28045 GN=AWB95_00020 PE=4 SV=1
MM1 pKa = 7.69TDD3 pKa = 3.3YY4 pKa = 11.52KK5 pKa = 11.3LFMCVQCGFEE15 pKa = 3.97YY16 pKa = 10.91DD17 pKa = 3.75EE18 pKa = 4.64AKK20 pKa = 10.38GWPEE24 pKa = 4.27DD25 pKa = 4.17GIAPGTRR32 pKa = 11.84WDD34 pKa = 5.68DD35 pKa = 4.13IPDD38 pKa = 3.72DD39 pKa = 4.45WSCPDD44 pKa = 3.66CGAAKK49 pKa = 10.31SDD51 pKa = 3.66FEE53 pKa = 4.32MVEE56 pKa = 4.02VARR59 pKa = 11.84AA60 pKa = 3.1

Molecular weight: 6.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1X1RXF1|A0A1X1RXF1_MYCCE Uncharacterized protein OS=Mycobacterium celatum OX=28045 GN=AWB95_00570 PE=4 SV=1
MM1 pKa = 5.98TTKK4 pKa = 10.19PRR6 pKa = 11.84RR7 pKa = 11.84SVNLRR12 pKa = 11.84ILPSSMSVLAICAGLSSIRR31 pKa = 11.84FALEE35 pKa = 4.07AQPHH39 pKa = 5.84AAMALIAAAAILDD52 pKa = 4.04GLDD55 pKa = 3.18GRR57 pKa = 11.84VARR60 pKa = 11.84ILDD63 pKa = 3.53AEE65 pKa = 4.23SRR67 pKa = 11.84MGEE70 pKa = 4.31EE71 pKa = 4.16IDD73 pKa = 4.3SLADD77 pKa = 3.31AVNFGVAPAVVVYY90 pKa = 9.84VSLLASLPAGWVAVLLYY107 pKa = 10.19AVCIVLRR114 pKa = 11.84LARR117 pKa = 11.84FNALLDD123 pKa = 4.31DD124 pKa = 4.37ATLPAYY130 pKa = 9.29TRR132 pKa = 11.84EE133 pKa = 4.3FFVGMPAPAGAIAVLGPLAAKK154 pKa = 10.05LQFGVGWWSSPWFVCAWVVVCSMLVVSRR182 pKa = 11.84IPMKK186 pKa = 10.54KK187 pKa = 7.52MHH189 pKa = 6.54AVSVPPNFAALLLAVLAIVAAAAFLFPYY217 pKa = 9.23ILVMVAIAAYY227 pKa = 9.43LCHH230 pKa = 6.95IPFSVRR236 pKa = 11.84SHH238 pKa = 6.07RR239 pKa = 11.84WLAEE243 pKa = 3.75HH244 pKa = 6.94PEE246 pKa = 4.13VWGEE250 pKa = 3.86RR251 pKa = 11.84PKK253 pKa = 10.76EE254 pKa = 3.68RR255 pKa = 11.84RR256 pKa = 11.84AVRR259 pKa = 11.84RR260 pKa = 11.84AIRR263 pKa = 11.84RR264 pKa = 11.84AQPNRR269 pKa = 11.84RR270 pKa = 11.84SMARR274 pKa = 11.84LGLRR278 pKa = 11.84KK279 pKa = 9.67PGGG282 pKa = 3.38

Molecular weight: 30.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4310

0

4310

1386883

37

4338

321.8

34.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.133 ± 0.053

0.838 ± 0.01

6.265 ± 0.034

5.251 ± 0.028

3.034 ± 0.02

8.697 ± 0.035

2.26 ± 0.017

4.2 ± 0.024

2.27 ± 0.024

9.879 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.044 ± 0.016

2.197 ± 0.02

5.928 ± 0.037

3.067 ± 0.021

7.444 ± 0.035

5.267 ± 0.024

5.804 ± 0.028

8.679 ± 0.034

1.534 ± 0.015

2.21 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski