Streptococcus satellite phage Javan379

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZRD6|A0A4D5ZRD6_9VIRU HTH cro/C1-type domain-containing protein OS=Streptococcus satellite phage Javan379 OX=2558669 GN=JavanS379_0011 PE=4 SV=1
MM1 pKa = 7.4IGNYY5 pKa = 9.7LKK7 pKa = 10.7NLRR10 pKa = 11.84KK11 pKa = 9.32RR12 pKa = 11.84QNIKK16 pKa = 10.23VVEE19 pKa = 4.06LAKK22 pKa = 9.78TVQVSQPYY30 pKa = 9.63ISNIEE35 pKa = 3.86NEE37 pKa = 3.92KK38 pKa = 10.56RR39 pKa = 11.84YY40 pKa = 6.91PTKK43 pKa = 10.88DD44 pKa = 3.2LFFKK48 pKa = 10.61IIISIAEE55 pKa = 4.31LSPLNYY61 pKa = 9.63EE62 pKa = 4.45VYY64 pKa = 10.76CDD66 pKa = 4.14LEE68 pKa = 4.06LSKK71 pKa = 10.6EE72 pKa = 4.12QKK74 pKa = 10.04KK75 pKa = 10.63DD76 pKa = 2.89IYY78 pKa = 10.68IPDD81 pKa = 3.68VLPEE85 pKa = 4.04FWEE88 pKa = 5.03KK89 pKa = 10.89YY90 pKa = 10.2SSTILKK96 pKa = 10.08NINEE100 pKa = 4.21YY101 pKa = 11.0LDD103 pKa = 5.07DD104 pKa = 4.39EE105 pKa = 5.17DD106 pKa = 5.71EE107 pKa = 4.22ITSFEE112 pKa = 4.11DD113 pKa = 3.45FKK115 pKa = 11.5DD116 pKa = 4.37YY117 pKa = 11.04VSSWNIEE124 pKa = 3.83DD125 pKa = 3.46MAIFPEE131 pKa = 4.53FTDD134 pKa = 4.53FLDD137 pKa = 3.87SKK139 pKa = 10.99YY140 pKa = 11.12GQDD143 pKa = 4.44DD144 pKa = 3.55YY145 pKa = 12.2GEE147 pKa = 4.14FLDD150 pKa = 3.9YY151 pKa = 10.92KK152 pKa = 10.61DD153 pKa = 3.72YY154 pKa = 11.55SSYY157 pKa = 11.14QDD159 pKa = 3.26PEE161 pKa = 4.41YY162 pKa = 10.51IKK164 pKa = 10.92SIVTDD169 pKa = 2.87YY170 pKa = 10.46WYY172 pKa = 10.86QDD174 pKa = 3.41FLTEE178 pKa = 4.07FLDD181 pKa = 3.88YY182 pKa = 11.16FEE184 pKa = 4.73NTSTIDD190 pKa = 4.09GIPNPEE196 pKa = 3.93YY197 pKa = 10.68TEE199 pKa = 4.14IMLEE203 pKa = 3.97TLAPQEE209 pKa = 4.08LEE211 pKa = 3.51IYY213 pKa = 7.31TTIKK217 pKa = 10.19EE218 pKa = 4.13LQHH221 pKa = 6.45RR222 pKa = 11.84KK223 pKa = 10.32GIFDD227 pKa = 4.07RR228 pKa = 11.84YY229 pKa = 8.25QFKK232 pKa = 9.14NTDD235 pKa = 3.52KK236 pKa = 11.64NNLTDD241 pKa = 5.18LSIIDD246 pKa = 4.49DD247 pKa = 3.86SEE249 pKa = 5.71AIYY252 pKa = 11.05KK253 pKa = 8.4LTLDD257 pKa = 4.16GKK259 pKa = 9.27HH260 pKa = 6.25LSSADD265 pKa = 3.27IIALQTLINGIRR277 pKa = 11.84YY278 pKa = 8.9KK279 pKa = 10.69RR280 pKa = 3.43

Molecular weight: 33.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZLV8|A0A4D5ZLV8_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan379 OX=2558669 GN=JavanS379_0002 PE=4 SV=1
MM1 pKa = 7.99KK2 pKa = 9.16ITQHH6 pKa = 5.97IKK8 pKa = 8.98QDD10 pKa = 3.16GSIVYY15 pKa = 10.06RR16 pKa = 11.84SSIYY20 pKa = 10.7LGIDD24 pKa = 3.12QITGKK29 pKa = 10.06QVTTKK34 pKa = 9.23ITGRR38 pKa = 11.84TKK40 pKa = 10.86KK41 pKa = 9.71EE42 pKa = 4.06VKK44 pKa = 10.06QKK46 pKa = 11.0AQDD49 pKa = 3.3AVIDD53 pKa = 4.07FKK55 pKa = 11.51INGSTRR61 pKa = 11.84FQASTISTYY70 pKa = 11.16EE71 pKa = 3.9EE72 pKa = 4.49LASLWWDD79 pKa = 3.4NHH81 pKa = 3.94KK82 pKa = 9.36HH83 pKa = 4.09TVKK86 pKa = 10.56PNSQDD91 pKa = 2.89ATKK94 pKa = 10.73RR95 pKa = 11.84LIDD98 pKa = 3.61NHH100 pKa = 5.95VLPLFGAYY108 pKa = 9.56KK109 pKa = 10.2LDD111 pKa = 3.65KK112 pKa = 10.12LTTPLIQNIVNKK124 pKa = 10.34LADD127 pKa = 3.6KK128 pKa = 9.52TNKK131 pKa = 10.12GEE133 pKa = 4.13AGAYY137 pKa = 8.89LHH139 pKa = 6.56YY140 pKa = 11.05DD141 pKa = 4.09KK142 pKa = 11.05IHH144 pKa = 6.58ALNKK148 pKa = 10.18RR149 pKa = 11.84ILQYY153 pKa = 10.84GVVMQAIPFNPARR166 pKa = 11.84EE167 pKa = 4.24VILPRR172 pKa = 11.84NTKK175 pKa = 9.05KK176 pKa = 10.8ANRR179 pKa = 11.84QKK181 pKa = 10.89VKK183 pKa = 10.57HH184 pKa = 5.76FNNLEE189 pKa = 4.01LKK191 pKa = 10.65RR192 pKa = 11.84FLDD195 pKa = 4.03YY196 pKa = 11.21LDD198 pKa = 4.46SLNTSKK204 pKa = 10.76YY205 pKa = 8.48RR206 pKa = 11.84YY207 pKa = 8.75FYY209 pKa = 10.96EE210 pKa = 3.79VTLYY214 pKa = 11.08KK215 pKa = 10.63FILATGCRR223 pKa = 11.84INEE226 pKa = 3.95VLALEE231 pKa = 4.43WSDD234 pKa = 3.56IDD236 pKa = 4.22LDD238 pKa = 4.0SAVVHH243 pKa = 5.01VTKK246 pKa = 10.16TLNYY250 pKa = 8.35KK251 pKa = 9.4QEE253 pKa = 4.1INSPKK258 pKa = 10.23SKK260 pKa = 10.48SSYY263 pKa = 10.28RR264 pKa = 11.84DD265 pKa = 2.84IDD267 pKa = 3.35IDD269 pKa = 3.81NQTVTMLKK277 pKa = 9.66QYY279 pKa = 10.52KK280 pKa = 9.62RR281 pKa = 11.84RR282 pKa = 11.84QTQEE286 pKa = 3.07AWKK289 pKa = 10.2LGQTEE294 pKa = 4.85SIVFSDD300 pKa = 5.45FINGYY305 pKa = 10.27ANNRR309 pKa = 11.84SLFTRR314 pKa = 11.84LTTHH318 pKa = 6.89FKK320 pKa = 10.02RR321 pKa = 11.84AKK323 pKa = 8.34VPNIGFHH330 pKa = 5.98GFRR333 pKa = 11.84HH334 pKa = 4.87THH336 pKa = 6.58ASLLLNSGIPYY347 pKa = 10.0KK348 pKa = 10.34EE349 pKa = 3.8LQHH352 pKa = 6.73RR353 pKa = 11.84LGHH356 pKa = 5.68STLSMTMDD364 pKa = 3.58IYY366 pKa = 11.68SHH368 pKa = 6.98LSKK371 pKa = 11.0EE372 pKa = 4.25NAKK375 pKa = 10.37KK376 pKa = 10.38AVSFYY381 pKa = 10.59EE382 pKa = 3.87MAMEE386 pKa = 5.16SII388 pKa = 4.37

Molecular weight: 44.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13

0

13

2678

55

479

206.0

23.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.452 ± 0.447

0.523 ± 0.127

5.601 ± 0.562

8.364 ± 0.713

4.294 ± 0.278

4.668 ± 0.365

1.755 ± 0.356

6.945 ± 0.458

8.701 ± 0.435

9.821 ± 0.545

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.166 ± 0.266

6.273 ± 0.54

3.174 ± 0.61

4.444 ± 0.418

4.742 ± 0.337

5.639 ± 0.441

6.535 ± 0.325

5.078 ± 0.493

0.859 ± 0.156

4.966 ± 0.538
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski