Lunatimonas lonarensis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Lunatimonas

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4825 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7ZS84|R7ZS84_9BACT Alpha-L-rhamnosidase OS=Lunatimonas lonarensis OX=1232681 GN=ADIS_2735 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 10.39SLSIYY7 pKa = 9.14INHH10 pKa = 7.52GIFVLIAMVLLFFDD24 pKa = 4.42FQAAKK29 pKa = 10.62AQGFNNNEE37 pKa = 4.08WIFGYY42 pKa = 10.69CEE44 pKa = 4.08GGEE47 pKa = 4.01NNYY50 pKa = 10.64LSFGKK55 pKa = 10.28DD56 pKa = 2.56GTARR60 pKa = 11.84VRR62 pKa = 11.84TLSPSVVLGKK72 pKa = 11.01GNTAMAIDD80 pKa = 5.62PISGDD85 pKa = 3.01ILFYY89 pKa = 10.83TDD91 pKa = 3.45GALVYY96 pKa = 10.49NYY98 pKa = 10.02LNQPMQGIIGEE109 pKa = 4.31LGGDD113 pKa = 3.22EE114 pKa = 4.42TGRR117 pKa = 11.84QTVAIAVQEE126 pKa = 3.95FDD128 pKa = 5.22PIPGGSRR135 pKa = 11.84SFYY138 pKa = 10.62LFFINRR144 pKa = 11.84RR145 pKa = 11.84GEE147 pKa = 3.96LEE149 pKa = 3.96YY150 pKa = 11.19DD151 pKa = 3.62VVDD154 pKa = 3.99MNNQGGAPASQPPAGAVSGGGILGTAQGGVAVIKK188 pKa = 9.71TPASEE193 pKa = 4.0SHH195 pKa = 6.91LVFFDD200 pKa = 3.32NGNLQVYY207 pKa = 10.03RR208 pKa = 11.84IEE210 pKa = 4.51DD211 pKa = 3.27QLGQFTLLQSEE222 pKa = 4.6ALDD225 pKa = 3.7FVPEE229 pKa = 3.99AFVFDD234 pKa = 3.95EE235 pKa = 4.8GSEE238 pKa = 4.1KK239 pKa = 10.55FVVIPQGTGADD250 pKa = 3.93LIVFDD255 pKa = 5.59FDD257 pKa = 4.27ASSGTLGNAQTLEE270 pKa = 4.21NTGGDD275 pKa = 3.6DD276 pKa = 4.58PIFGVAFSPDD286 pKa = 2.65GSMLYY291 pKa = 10.4FSRR294 pKa = 11.84GNQLFRR300 pKa = 11.84IGADD304 pKa = 3.09GSLADD309 pKa = 4.34EE310 pKa = 4.65LPEE313 pKa = 4.12EE314 pKa = 4.46EE315 pKa = 4.75EE316 pKa = 4.98EE317 pKa = 4.27EE318 pKa = 4.21DD319 pKa = 5.6QEE321 pKa = 5.96DD322 pKa = 4.28EE323 pKa = 4.72DD324 pKa = 5.09PEE326 pKa = 4.43ILTGPVEE333 pKa = 4.2VALGHH338 pKa = 6.43DD339 pKa = 4.3LFRR342 pKa = 11.84IYY344 pKa = 10.8DD345 pKa = 3.77LRR347 pKa = 11.84VGPDD351 pKa = 3.03GQLYY355 pKa = 9.76YY356 pKa = 9.97IYY358 pKa = 10.04EE359 pKa = 4.14EE360 pKa = 4.71TEE362 pKa = 3.92GGPQFLGRR370 pKa = 11.84IVNPDD375 pKa = 3.15EE376 pKa = 4.21EE377 pKa = 4.89ALGEE381 pKa = 4.22LTVEE385 pKa = 4.48ADD387 pKa = 3.52PFEE390 pKa = 4.49GTDD393 pKa = 3.44FCGRR397 pKa = 11.84VFTVFTPTIDD407 pKa = 3.22VGPEE411 pKa = 3.35VDD413 pKa = 4.75FTWEE417 pKa = 3.92PFDD420 pKa = 3.8PCMNNPLLLTSQISPPNYY438 pKa = 9.54RR439 pKa = 11.84PVSFNWEE446 pKa = 3.91ILPPLVDD453 pKa = 3.67EE454 pKa = 5.24DD455 pKa = 4.42GEE457 pKa = 4.37EE458 pKa = 4.42IEE460 pKa = 4.39MDD462 pKa = 3.64LSKK465 pKa = 11.13EE466 pKa = 3.9HH467 pKa = 6.81LLLPRR472 pKa = 11.84EE473 pKa = 4.48ATSEE477 pKa = 4.04QQVTVVLTVTFANGEE492 pKa = 4.28TRR494 pKa = 11.84EE495 pKa = 4.12VTQTINFQEE504 pKa = 4.43NDD506 pKa = 3.52LQVQFNPADD515 pKa = 3.66TTLCDD520 pKa = 3.71PACIDD525 pKa = 4.78LMPLVDD531 pKa = 3.86VQSGQDD537 pKa = 3.07QGGQPGQPGVGQPGFGQPGFGQPGFGQPGFGQPGVGQPGFGQQPGQGGNYY587 pKa = 9.81EE588 pKa = 4.32YY589 pKa = 10.67FWSNKK594 pKa = 9.62RR595 pKa = 11.84EE596 pKa = 4.29DD597 pKa = 3.47GWGPEE602 pKa = 4.27APNEE606 pKa = 4.19VCRR609 pKa = 11.84PGYY612 pKa = 8.9YY613 pKa = 8.62WVLVRR618 pKa = 11.84EE619 pKa = 4.47VGSTCYY625 pKa = 10.18SYY627 pKa = 11.6AGIRR631 pKa = 11.84IQMWDD636 pKa = 3.53VQDD639 pKa = 3.35QTNNIWYY646 pKa = 9.24FGDD649 pKa = 3.94GAGLDD654 pKa = 4.29FNPDD658 pKa = 3.48PDD660 pKa = 5.66DD661 pKa = 4.66PDD663 pKa = 5.29APVPRR668 pKa = 11.84PIPSRR673 pKa = 11.84HH674 pKa = 6.05PRR676 pKa = 11.84NIPAGVTTVSDD687 pKa = 3.22QAGQVLFFTDD697 pKa = 5.3GEE699 pKa = 4.97TVWDD703 pKa = 4.1LNGNPMQNGLDD714 pKa = 3.39IGGDD718 pKa = 3.68PQSAGSVIAVPVASDD733 pKa = 3.13EE734 pKa = 4.34TLFYY738 pKa = 11.15LFTTRR743 pKa = 11.84RR744 pKa = 11.84GADD747 pKa = 3.36GNSVVSFSMVDD758 pKa = 2.94IKK760 pKa = 11.46GNNDD764 pKa = 3.45DD765 pKa = 3.93GVGNVVTKK773 pKa = 11.23NNFLFSSSTEE783 pKa = 3.53HH784 pKa = 6.88SAALNAGDD792 pKa = 3.95TTWVAFHH799 pKa = 6.73EE800 pKa = 4.75AGNNTFRR807 pKa = 11.84MYY809 pKa = 10.17PVSGQGIGQPVFSSVGGVHH828 pKa = 6.58SFGSSSGVMKK838 pKa = 10.48FSGDD842 pKa = 3.42GSRR845 pKa = 11.84LAITFQEE852 pKa = 4.07GGMNKK857 pKa = 9.81LQIFDD862 pKa = 4.25FDD864 pKa = 4.11QNTGEE869 pKa = 4.11LTEE872 pKa = 4.6FALLDD877 pKa = 4.31LGTDD881 pKa = 3.3GDD883 pKa = 4.41VYY885 pKa = 11.32GLEE888 pKa = 4.12FSTDD892 pKa = 2.93NTRR895 pKa = 11.84VYY897 pKa = 10.65VSYY900 pKa = 11.04RR901 pKa = 11.84NGGPGVEE908 pKa = 4.04EE909 pKa = 5.07FYY911 pKa = 10.99LSSVEE916 pKa = 4.15EE917 pKa = 4.41TDD919 pKa = 6.09DD920 pKa = 4.26SDD922 pKa = 4.03PDD924 pKa = 3.66NPVTTRR930 pKa = 11.84CQEE933 pKa = 4.14CFDD936 pKa = 4.03SAVEE940 pKa = 3.82RR941 pKa = 11.84RR942 pKa = 11.84EE943 pKa = 3.74IEE945 pKa = 3.96QCILASRR952 pKa = 11.84AAISQTGGLPLGALQVGPDD971 pKa = 3.56GQIYY975 pKa = 9.1VAVVGSNQIGQILPGRR991 pKa = 11.84GCNPSTFNQDD1001 pKa = 2.41AVEE1004 pKa = 4.11PMPGTTNLGLPSFVQQSGSNIPEE1027 pKa = 4.2PSLAGPNRR1035 pKa = 11.84LCVGADD1041 pKa = 3.34EE1042 pKa = 4.79GAVGLFEE1049 pKa = 5.87GGGEE1053 pKa = 4.09PDD1055 pKa = 2.89IDD1057 pKa = 4.14LYY1059 pKa = 11.62NWTIFNEE1066 pKa = 3.94QGEE1069 pKa = 4.55IVDD1072 pKa = 3.61QFLNGAEE1079 pKa = 3.9EE1080 pKa = 4.18LQNLEE1085 pKa = 4.16YY1086 pKa = 10.91QFATAGLFTVQLEE1099 pKa = 4.4VNRR1102 pKa = 11.84CGEE1105 pKa = 3.81PWDD1108 pKa = 3.98EE1109 pKa = 4.08IFRR1112 pKa = 11.84LEE1114 pKa = 4.2VEE1116 pKa = 4.71VVDD1119 pKa = 4.16SPEE1122 pKa = 5.24IILPTDD1128 pKa = 2.99IALCADD1134 pKa = 3.58AVLEE1138 pKa = 4.26LVAVDD1143 pKa = 4.25PDD1145 pKa = 3.84DD1146 pKa = 4.38PRR1148 pKa = 11.84LDD1150 pKa = 3.5EE1151 pKa = 5.85YY1152 pKa = 11.6VFEE1155 pKa = 4.46WVNAAGEE1162 pKa = 4.32IVGDD1166 pKa = 3.83QNVLEE1171 pKa = 4.27VTEE1174 pKa = 4.07EE1175 pKa = 3.96SIYY1178 pKa = 10.55TVTVAYY1184 pKa = 9.89RR1185 pKa = 11.84LPEE1188 pKa = 4.45DD1189 pKa = 4.62ADD1191 pKa = 3.42PEE1193 pKa = 4.3MFQTCPVSRR1202 pKa = 11.84SVFVGPPFDD1211 pKa = 4.63FDD1213 pKa = 3.43IDD1215 pKa = 3.62QSEE1218 pKa = 4.53EE1219 pKa = 4.2EE1220 pKa = 4.42VCLGEE1225 pKa = 4.41TVTFTPNSPVSGSWSIHH1242 pKa = 5.92RR1243 pKa = 11.84EE1244 pKa = 3.8GSQDD1248 pKa = 4.1RR1249 pKa = 11.84ISLPDD1254 pKa = 3.66TLQLTLNTAILGEE1267 pKa = 4.38AGDD1270 pKa = 4.02YY1271 pKa = 11.14EE1272 pKa = 5.6LFFLTSDD1279 pKa = 4.33PLDD1282 pKa = 3.64EE1283 pKa = 4.46TCLFEE1288 pKa = 5.45RR1289 pKa = 11.84SAFLRR1294 pKa = 11.84VNAGPQFEE1302 pKa = 5.06VIATSPAQSCEE1313 pKa = 3.65IGDD1316 pKa = 3.99GVLEE1320 pKa = 4.13IQAGVLLDD1328 pKa = 3.6SLVVQEE1334 pKa = 4.32TGQLFFDD1341 pKa = 4.36VLPNDD1346 pKa = 4.19IIVVDD1351 pKa = 4.08GLEE1354 pKa = 4.06PGIYY1358 pKa = 9.45TLLGFANGCSSSQAAVIEE1376 pKa = 4.3NANPPSDD1383 pKa = 3.51VLFEE1387 pKa = 4.42LEE1389 pKa = 4.75TRR1391 pKa = 11.84DD1392 pKa = 3.74EE1393 pKa = 4.14QCAPEE1398 pKa = 4.24GLVAGGISILFGNGPASGVYY1418 pKa = 9.31EE1419 pKa = 4.17VLGLDD1424 pKa = 3.24TGEE1427 pKa = 5.05LISEE1431 pKa = 4.36SFANQSVIALDD1442 pKa = 4.23LPPGRR1447 pKa = 11.84YY1448 pKa = 8.73LVSVTDD1454 pKa = 3.44VGGCEE1459 pKa = 3.85VPAPSEE1465 pKa = 4.18VIVNEE1470 pKa = 3.9FSEE1473 pKa = 4.59SVEE1476 pKa = 4.05VEE1478 pKa = 3.97LFSPNLCGPVVSTSITASGDD1498 pKa = 3.16FLAVDD1503 pKa = 3.88RR1504 pKa = 11.84FGWFRR1509 pKa = 11.84EE1510 pKa = 4.12VNGEE1514 pKa = 4.35FIPITGEE1521 pKa = 3.6SGMVISVSEE1530 pKa = 3.94PGRR1533 pKa = 11.84YY1534 pKa = 7.73EE1535 pKa = 3.54VRR1537 pKa = 11.84LYY1539 pKa = 11.47NEE1541 pKa = 4.49FDD1543 pKa = 4.31CIIGSGVIDD1552 pKa = 4.45VIQSATEE1559 pKa = 3.88PPVLSPRR1566 pKa = 11.84YY1567 pKa = 9.31VICTLDD1573 pKa = 3.45GNLAEE1578 pKa = 4.57LQAGAGFASYY1588 pKa = 10.1SWSLDD1593 pKa = 3.16GQEE1596 pKa = 4.77LGRR1599 pKa = 11.84EE1600 pKa = 4.14ARR1602 pKa = 11.84FVPTLPGRR1610 pKa = 11.84YY1611 pKa = 8.48EE1612 pKa = 4.04LLVTDD1617 pKa = 3.95EE1618 pKa = 4.94AGCEE1622 pKa = 3.8FLVDD1626 pKa = 4.36FEE1628 pKa = 4.76VEE1630 pKa = 4.0EE1631 pKa = 4.39DD1632 pKa = 3.73CEE1634 pKa = 4.63INVRR1638 pKa = 11.84FPNAIIPGSPTRR1650 pKa = 11.84NFLLYY1655 pKa = 10.24TRR1657 pKa = 11.84GPIDD1661 pKa = 3.23KK1662 pKa = 10.29LGVYY1666 pKa = 9.74IYY1668 pKa = 10.62NRR1670 pKa = 11.84WGEE1673 pKa = 4.05LIYY1676 pKa = 11.0YY1677 pKa = 10.01CEE1679 pKa = 4.01EE1680 pKa = 4.15TNPSEE1685 pKa = 4.55EE1686 pKa = 4.37ISICTWDD1693 pKa = 4.26GYY1695 pKa = 11.74VNGQKK1700 pKa = 10.13VPVGTYY1706 pKa = 8.52PVVVKK1711 pKa = 9.01FSNQQQQIEE1720 pKa = 4.32RR1721 pKa = 11.84TIRR1724 pKa = 11.84RR1725 pKa = 11.84AIVVIEE1731 pKa = 3.9

Molecular weight: 187.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7ZTC9|R7ZTC9_9BACT Molybdenum transport system permease OS=Lunatimonas lonarensis OX=1232681 GN=ADIS_2253 PE=3 SV=1
MM1 pKa = 7.15GRR3 pKa = 11.84EE4 pKa = 3.77KK5 pKa = 10.75AHH7 pKa = 6.57RR8 pKa = 11.84SAIIVARR15 pKa = 11.84GAAQPLVKK23 pKa = 10.02NAHH26 pKa = 5.64FRR28 pKa = 11.84WVLAAWTVEE37 pKa = 3.97EE38 pKa = 4.86ASLFRR43 pKa = 11.84QNPVLFGSALSRR55 pKa = 11.84CLGPGTDD62 pKa = 4.29VSPSSQGFWRR72 pKa = 11.84EE73 pKa = 3.85LVRR76 pKa = 11.84GIAMVAAKK84 pKa = 9.3TYY86 pKa = 10.16LSEE89 pKa = 4.47VVVKK93 pKa = 9.96PRR95 pKa = 11.84VEE97 pKa = 4.02TRR99 pKa = 11.84SYY101 pKa = 9.96PGWVV105 pKa = 3.11

Molecular weight: 11.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4825

0

4825

1591650

37

2922

329.9

37.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.086 ± 0.037

0.704 ± 0.011

5.446 ± 0.025

6.595 ± 0.036

5.204 ± 0.03

7.487 ± 0.035

2.048 ± 0.019

6.509 ± 0.03

5.62 ± 0.041

9.982 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.427 ± 0.016

4.6 ± 0.035

4.325 ± 0.023

3.678 ± 0.017

5.07 ± 0.023

6.389 ± 0.025

5.081 ± 0.024

6.661 ± 0.027

1.382 ± 0.018

3.706 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski