Fusarium venenatum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium sambucinum species complex

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13945 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2L2T2E5|A0A2L2T2E5_9HYPO Uncharacterized protein OS=Fusarium venenatum OX=56646 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 10.58AFIFIAALLTAAEE15 pKa = 4.18AVLAKK20 pKa = 10.71DD21 pKa = 3.99LVAVEE26 pKa = 4.9APADD30 pKa = 3.82TWCITYY36 pKa = 10.58LSTYY40 pKa = 9.64LATVTNPGDD49 pKa = 3.9ILPSDD54 pKa = 3.58ASGNDD59 pKa = 3.58GPDD62 pKa = 3.23AQNSGRR68 pKa = 11.84LPFAPSLHH76 pKa = 5.5PTFRR80 pKa = 11.84RR81 pKa = 11.84NTSISVTRR89 pKa = 11.84SAMSTDD95 pKa = 3.15VRR97 pKa = 11.84DD98 pKa = 3.74TLGPEE103 pKa = 4.14SSLSTSVVINTVDD116 pKa = 3.36TSPVNSEE123 pKa = 4.13SSDD126 pKa = 3.81LDD128 pKa = 3.47VDD130 pKa = 3.85PTAAQSSYY138 pKa = 10.89GVSTITDD145 pKa = 3.86GLSTMAASTVDD156 pKa = 3.65AEE158 pKa = 4.5ATSTSTDD165 pKa = 3.07IIEE168 pKa = 4.13PAGRR172 pKa = 11.84IVIFLIQTTDD182 pKa = 2.99NEE184 pKa = 3.57KK185 pKa = 9.17RR186 pKa = 11.84AIYY189 pKa = 9.96RR190 pKa = 11.84RR191 pKa = 11.84VISGFIGLNNPSVCTFAATFNLAEE215 pKa = 4.45GQLFADD221 pKa = 5.2GVPIYY226 pKa = 11.02YY227 pKa = 10.32SGEE230 pKa = 4.04DD231 pKa = 3.68YY232 pKa = 11.25KK233 pKa = 11.19EE234 pKa = 4.47LSAQGRR240 pKa = 11.84PPSGSITSGFADD252 pKa = 3.35SGGTLTFRR260 pKa = 11.84NSDD263 pKa = 3.98LPNGEE268 pKa = 5.23AGFCQDD274 pKa = 4.7ADD276 pKa = 3.72GQVYY280 pKa = 7.83ITFTTGPSGCVPVNLAAYY298 pKa = 9.83NVEE301 pKa = 3.9QCQDD305 pKa = 2.84GRR307 pKa = 11.84LIGLDD312 pKa = 3.56EE313 pKa = 4.4LTSSVSGTAITTADD327 pKa = 3.43QSFSAPSTFGEE338 pKa = 4.47LPEE341 pKa = 4.4STDD344 pKa = 4.45LIQSQSIIPSSQTSEE359 pKa = 4.46FEE361 pKa = 3.94ASATSLSHH369 pKa = 4.91VTEE372 pKa = 4.67SSTQEE377 pKa = 3.67LGGASSQEE385 pKa = 3.97TSALTVRR392 pKa = 11.84EE393 pKa = 4.0DD394 pKa = 3.96LEE396 pKa = 4.52TLSSVLTTSGDD407 pKa = 3.8SASEE411 pKa = 4.07PTSASTPHH419 pKa = 6.48LSSEE423 pKa = 4.29TSDD426 pKa = 4.82LLDD429 pKa = 3.6STTTSSDD436 pKa = 2.92GTEE439 pKa = 3.99LSTTSGVEE447 pKa = 4.04SQTTTGIEE455 pKa = 4.02TSHH458 pKa = 7.85IEE460 pKa = 4.17TTIKK464 pKa = 10.09TSVSEE469 pKa = 3.98TTIILEE475 pKa = 4.34TTEE478 pKa = 4.03ATPTEE483 pKa = 4.56GDD485 pKa = 3.34TSSTEE490 pKa = 4.0VVSDD494 pKa = 3.47VDD496 pKa = 3.64TTAATDD502 pKa = 3.68TTDD505 pKa = 3.26TTTTNADD512 pKa = 3.69VITDD516 pKa = 4.44LEE518 pKa = 4.83DD519 pKa = 3.46STTMEE524 pKa = 4.63AEE526 pKa = 4.01TTAAEE531 pKa = 4.48TTTSVKK537 pKa = 9.31PTTTTEE543 pKa = 4.05TATEE547 pKa = 4.31PEE549 pKa = 4.42DD550 pKa = 3.59LTTTEE555 pKa = 5.2AEE557 pKa = 4.32TTTPEE562 pKa = 3.61ITTTAEE568 pKa = 3.83LTTTTEE574 pKa = 4.22AAPEE578 pKa = 4.06PAPQFACGDD587 pKa = 3.71PGYY590 pKa = 7.01TTTYY594 pKa = 9.01TYY596 pKa = 11.62NSVTFNLQCEE606 pKa = 4.51SNYY609 pKa = 10.71SYY611 pKa = 11.24FGLEE615 pKa = 4.18TFSTASFGEE624 pKa = 4.33CLSRR628 pKa = 11.84CALNSACNGIVWRR641 pKa = 11.84RR642 pKa = 11.84ASLLCSLTTGVTAYY656 pKa = 10.53GPDD659 pKa = 3.12NRR661 pKa = 11.84FDD663 pKa = 3.61VATVASRR670 pKa = 11.84AA671 pKa = 3.56

Molecular weight: 69.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2L2TAM3|A0A2L2TAM3_9HYPO NAD_binding_2 domain-containing protein OS=Fusarium venenatum OX=56646 PE=4 SV=1
MM1 pKa = 7.86PLTRR5 pKa = 11.84THH7 pKa = 6.34RR8 pKa = 11.84HH9 pKa = 4.3SAPRR13 pKa = 11.84RR14 pKa = 11.84SIFSTRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84APARR26 pKa = 11.84SNRR29 pKa = 11.84HH30 pKa = 4.32TVTTTTTTTTKK41 pKa = 9.91PRR43 pKa = 11.84RR44 pKa = 11.84GMFGGGSTARR54 pKa = 11.84RR55 pKa = 11.84THH57 pKa = 5.96GAAPVHH63 pKa = 5.35HH64 pKa = 6.52HH65 pKa = 5.47QRR67 pKa = 11.84RR68 pKa = 11.84PSMKK72 pKa = 10.02DD73 pKa = 2.95KK74 pKa = 11.41VSGALLKK81 pKa = 10.61IKK83 pKa = 10.52GSLTRR88 pKa = 11.84RR89 pKa = 11.84PGVKK93 pKa = 9.89AAGTRR98 pKa = 11.84RR99 pKa = 11.84MHH101 pKa = 5.65GTDD104 pKa = 2.95GRR106 pKa = 11.84GARR109 pKa = 11.84HH110 pKa = 5.73RR111 pKa = 11.84RR112 pKa = 11.84YY113 pKa = 10.37

Molecular weight: 12.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13945

0

13945

6439375

10

13331

461.8

51.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.183 ± 0.018

1.314 ± 0.008

5.881 ± 0.017

6.191 ± 0.024

3.783 ± 0.013

6.735 ± 0.02

2.365 ± 0.011

5.153 ± 0.016

5.077 ± 0.019

8.715 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.267 ± 0.007

3.883 ± 0.01

5.876 ± 0.024

4.032 ± 0.014

5.776 ± 0.021

8.167 ± 0.025

6.128 ± 0.026

6.136 ± 0.016

1.522 ± 0.009

2.817 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski