Influenza A virus (strain A/little yellow-shouldered bat/Guatemala/153/2009(H17N10))

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Influenza A virus; H17N10 subtype

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H6QM74|H6QM74_I09A8 Nucleoprotein OS=Influenza A virus (strain A/little yellow-shouldered bat/Guatemala/153/2009(H17N10)) OX=1129345 GN=NP PE=3 SV=1
MM1 pKa = 7.41EE2 pKa = 6.43LIVLLILLNPYY13 pKa = 9.2TFVLGDD19 pKa = 4.44RR20 pKa = 11.84ICIGYY25 pKa = 8.49QANQNNQTVNTLLEE39 pKa = 4.12QNVPVTGAQEE49 pKa = 3.87ILEE52 pKa = 4.41TNHH55 pKa = 6.33NGKK58 pKa = 9.29LCSLNGVPPLDD69 pKa = 4.05LQSCTLAGWLLGNPNCDD86 pKa = 3.14SLLEE90 pKa = 4.24AEE92 pKa = 4.23EE93 pKa = 3.8WSYY96 pKa = 11.85IKK98 pKa = 10.49INEE101 pKa = 4.26SAPDD105 pKa = 3.87DD106 pKa = 3.83LCFPGNFEE114 pKa = 4.39NLQDD118 pKa = 4.78LLLEE122 pKa = 4.12MSGVQNFTKK131 pKa = 10.57VKK133 pKa = 10.12LFNPQSMTGVTTNNVDD149 pKa = 3.33QTCPFEE155 pKa = 4.68GKK157 pKa = 9.62PSFYY161 pKa = 10.79RR162 pKa = 11.84NLNWIQGNSGLPFNIEE178 pKa = 3.72IKK180 pKa = 10.87NPTSNPLLLLWGIHH194 pKa = 4.61NTKK197 pKa = 10.49DD198 pKa = 3.03AAQQRR203 pKa = 11.84NLYY206 pKa = 9.54GNDD209 pKa = 3.05YY210 pKa = 10.62SYY212 pKa = 11.22TIFNFGEE219 pKa = 4.01KK220 pKa = 9.83SEE222 pKa = 4.13EE223 pKa = 3.67FRR225 pKa = 11.84PEE227 pKa = 3.02IGQRR231 pKa = 11.84DD232 pKa = 4.06EE233 pKa = 4.83VKK235 pKa = 10.53AHH237 pKa = 6.03QDD239 pKa = 3.18RR240 pKa = 11.84IDD242 pKa = 4.02YY243 pKa = 10.38YY244 pKa = 10.08WGSLPAQSTLRR255 pKa = 11.84IEE257 pKa = 4.34STGNLIAPEE266 pKa = 3.71YY267 pKa = 9.91GFYY270 pKa = 10.8YY271 pKa = 9.98KK272 pKa = 10.4RR273 pKa = 11.84KK274 pKa = 7.93EE275 pKa = 4.23GKK277 pKa = 10.15GGLMKK282 pKa = 10.68SKK284 pKa = 10.71LPISDD289 pKa = 5.04CSTKK293 pKa = 10.63CQTPLGALNSTLPFQNVHH311 pKa = 5.06QQTIGNCPKK320 pKa = 10.16YY321 pKa = 11.03VKK323 pKa = 9.74ATSLMLATGLRR334 pKa = 11.84NNPQMEE340 pKa = 4.17GRR342 pKa = 11.84GLFGAIAGFIEE353 pKa = 5.0GGWQGMIDD361 pKa = 3.34GWYY364 pKa = 10.11GYY366 pKa = 9.32HH367 pKa = 7.04HH368 pKa = 7.2EE369 pKa = 4.18NQEE372 pKa = 4.07GSGYY376 pKa = 10.86AADD379 pKa = 5.01KK380 pKa = 10.51EE381 pKa = 4.49ATQKK385 pKa = 11.19AVDD388 pKa = 4.46AITNKK393 pKa = 9.81VNSIIDD399 pKa = 3.38KK400 pKa = 9.93MNSQFEE406 pKa = 4.63SNIKK410 pKa = 9.7EE411 pKa = 4.08FNRR414 pKa = 11.84LEE416 pKa = 4.35LRR418 pKa = 11.84IQHH421 pKa = 6.55LSDD424 pKa = 3.68RR425 pKa = 11.84VDD427 pKa = 4.29DD428 pKa = 4.57ALLDD432 pKa = 3.13IWSYY436 pKa = 8.75NTEE439 pKa = 4.04LLVLLEE445 pKa = 4.23NEE447 pKa = 4.24RR448 pKa = 11.84TLDD451 pKa = 3.57FHH453 pKa = 7.39DD454 pKa = 5.04ANVKK458 pKa = 10.21NLFEE462 pKa = 4.18KK463 pKa = 11.01VKK465 pKa = 10.96AQLKK469 pKa = 10.6DD470 pKa = 3.44NAIDD474 pKa = 3.66EE475 pKa = 4.81GNGCFLLLHH484 pKa = 6.57KK485 pKa = 10.67CNNSCMDD492 pKa = 4.78DD493 pKa = 3.59IKK495 pKa = 11.39NGTYY499 pKa = 10.34KK500 pKa = 11.01YY501 pKa = 9.21MDD503 pKa = 3.72YY504 pKa = 10.81RR505 pKa = 11.84EE506 pKa = 4.05EE507 pKa = 4.01SHH509 pKa = 7.54IEE511 pKa = 3.71KK512 pKa = 10.59QKK514 pKa = 10.49IDD516 pKa = 3.71GVKK519 pKa = 8.73LTDD522 pKa = 3.24YY523 pKa = 10.68SRR525 pKa = 11.84YY526 pKa = 10.63YY527 pKa = 10.58IMTLYY532 pKa = 9.59STIASSVVLGSLIIAAFLWGCQKK555 pKa = 11.09GSIQCKK561 pKa = 9.13ICII564 pKa = 4.08

Molecular weight: 63.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H6QM71|H6QM71_I09A8 RNA-directed RNA polymerase catalytic subunit OS=Influenza A virus (strain A/little yellow-shouldered bat/Guatemala/153/2009(H17N10)) OX=1129345 GN=PB1 PE=4 SV=1
MM1 pKa = 7.33EE2 pKa = 6.17RR3 pKa = 11.84IKK5 pKa = 10.93EE6 pKa = 3.92LLEE9 pKa = 3.81MVKK12 pKa = 10.28NSRR15 pKa = 11.84MRR17 pKa = 11.84EE18 pKa = 3.86ILTTTSVDD26 pKa = 2.85HH27 pKa = 5.96MAVIKK32 pKa = 10.36KK33 pKa = 7.36YY34 pKa = 9.12TSGRR38 pKa = 11.84QEE40 pKa = 3.99KK41 pKa = 10.64NPALRR46 pKa = 11.84MKK48 pKa = 10.19WMMAMKK54 pKa = 10.18YY55 pKa = 9.37PISASSRR62 pKa = 11.84IRR64 pKa = 11.84EE65 pKa = 4.21MIPEE69 pKa = 4.19KK70 pKa = 11.09DD71 pKa = 3.27EE72 pKa = 5.33DD73 pKa = 5.52GNTLWTNTKK82 pKa = 10.09DD83 pKa = 3.22AGSNRR88 pKa = 11.84VLVSPNAVTWWNRR101 pKa = 11.84AGPVSDD107 pKa = 3.54VVHH110 pKa = 6.0YY111 pKa = 9.76PRR113 pKa = 11.84VYY115 pKa = 11.01KK116 pKa = 10.19MYY118 pKa = 10.25FDD120 pKa = 3.62RR121 pKa = 11.84LEE123 pKa = 4.26RR124 pKa = 11.84LTHH127 pKa = 5.26GTFGPVKK134 pKa = 10.1FYY136 pKa = 11.42NQVKK140 pKa = 8.71VRR142 pKa = 11.84KK143 pKa = 9.41RR144 pKa = 11.84VDD146 pKa = 2.96INPGHH151 pKa = 7.14KK152 pKa = 10.4DD153 pKa = 3.12LTSRR157 pKa = 11.84EE158 pKa = 4.1AQEE161 pKa = 4.57VIMEE165 pKa = 4.2VVFPNEE171 pKa = 3.32VGARR175 pKa = 11.84TLSSDD180 pKa = 3.38AQLTITKK187 pKa = 9.41EE188 pKa = 4.04KK189 pKa = 10.8KK190 pKa = 10.23EE191 pKa = 3.87EE192 pKa = 3.95LKK194 pKa = 10.74NCKK197 pKa = 9.41ISPIMVAYY205 pKa = 8.87MLEE208 pKa = 4.23RR209 pKa = 11.84EE210 pKa = 4.37LVRR213 pKa = 11.84RR214 pKa = 11.84TRR216 pKa = 11.84FLPIAGATSSTYY228 pKa = 10.78VEE230 pKa = 4.48VLHH233 pKa = 6.22LTQGTCWEE241 pKa = 4.07QQYY244 pKa = 8.58TPGGEE249 pKa = 4.19AEE251 pKa = 5.25NDD253 pKa = 3.85DD254 pKa = 4.81LDD256 pKa = 3.62QTLIIASRR264 pKa = 11.84NIVRR268 pKa = 11.84RR269 pKa = 11.84SIVAIDD275 pKa = 3.83PLASLLSMCHH285 pKa = 4.51TTSISSEE292 pKa = 3.89PLVEE296 pKa = 4.06ILRR299 pKa = 11.84SNPTDD304 pKa = 3.37EE305 pKa = 4.35QAVNICKK312 pKa = 10.0AALGIRR318 pKa = 11.84INNSFSFGGYY328 pKa = 7.5NFKK331 pKa = 10.39RR332 pKa = 11.84VKK334 pKa = 10.43GSSQRR339 pKa = 11.84TEE341 pKa = 3.87KK342 pKa = 10.91AVLTGNLQTLTMTIFEE358 pKa = 4.88GYY360 pKa = 10.56EE361 pKa = 3.77EE362 pKa = 4.93FNVSGKK368 pKa = 9.99RR369 pKa = 11.84ASAVLKK375 pKa = 10.67KK376 pKa = 9.67GTQRR380 pKa = 11.84LIQAIIGGRR389 pKa = 11.84TLEE392 pKa = 5.21DD393 pKa = 3.46ILNLMITLMVFSQEE407 pKa = 3.89EE408 pKa = 4.23KK409 pKa = 9.24MLKK412 pKa = 9.98AVRR415 pKa = 11.84GDD417 pKa = 3.59LNFVNRR423 pKa = 11.84ANQRR427 pKa = 11.84LNPMYY432 pKa = 10.24QLLRR436 pKa = 11.84HH437 pKa = 5.39FQKK440 pKa = 10.91DD441 pKa = 3.04SSTLLRR447 pKa = 11.84NWGTEE452 pKa = 3.95EE453 pKa = 4.2IDD455 pKa = 4.31PIMGIAGIMPDD466 pKa = 3.17GTINKK471 pKa = 8.25NQTLIGVRR479 pKa = 11.84LSQGGVDD486 pKa = 3.01EE487 pKa = 4.71YY488 pKa = 11.65SFNEE492 pKa = 4.33RR493 pKa = 11.84IRR495 pKa = 11.84VNIDD499 pKa = 2.37KK500 pKa = 10.45YY501 pKa = 11.09LRR503 pKa = 11.84VRR505 pKa = 11.84NEE507 pKa = 3.58KK508 pKa = 10.96GEE510 pKa = 4.15LLISPEE516 pKa = 4.37EE517 pKa = 3.87VSEE520 pKa = 4.16AQGQEE525 pKa = 4.05KK526 pKa = 10.84LPINYY531 pKa = 9.2NSSLMWEE538 pKa = 4.36VNGPEE543 pKa = 4.26SILTNTYY550 pKa = 9.85HH551 pKa = 7.33WIIKK555 pKa = 9.32NWEE558 pKa = 4.05LLKK561 pKa = 9.1TQWMTDD567 pKa = 3.0PTVLYY572 pKa = 10.96NRR574 pKa = 11.84MEE576 pKa = 4.14FEE578 pKa = 4.45PFQTLIPKK586 pKa = 10.04GNRR589 pKa = 11.84ATYY592 pKa = 10.54SGFTRR597 pKa = 11.84TLFQQMRR604 pKa = 11.84DD605 pKa = 3.39VEE607 pKa = 4.57GTFDD611 pKa = 4.22SIQVIKK617 pKa = 10.63LLPFSAHH624 pKa = 6.46PPSLGRR630 pKa = 11.84TQFSSFTLNIRR641 pKa = 11.84GAPLRR646 pKa = 11.84LLIRR650 pKa = 11.84GNSQVFNYY658 pKa = 10.42NQMEE662 pKa = 4.12NVIIVLGKK670 pKa = 10.2SVGSPEE676 pKa = 4.2RR677 pKa = 11.84SILTEE682 pKa = 3.77SSSIEE687 pKa = 4.15SAVLRR692 pKa = 11.84GFLILGKK699 pKa = 10.26ANSKK703 pKa = 9.91YY704 pKa = 10.93GPVLTIGEE712 pKa = 4.38LDD714 pKa = 3.14KK715 pKa = 11.41LGRR718 pKa = 11.84GEE720 pKa = 4.21KK721 pKa = 10.72ANVLIGQGDD730 pKa = 3.89TVLVMKK736 pKa = 10.33RR737 pKa = 11.84KK738 pKa = 9.31RR739 pKa = 11.84DD740 pKa = 3.62SSILTDD746 pKa = 3.22SQTALKK752 pKa = 10.24RR753 pKa = 11.84IRR755 pKa = 11.84LEE757 pKa = 3.74EE758 pKa = 4.22SKK760 pKa = 11.23

Molecular weight: 86.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10

0

10

4423

96

760

442.3

50.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.63 ± 0.562

1.628 ± 0.315

4.364 ± 0.275

7.619 ± 0.619

4.002 ± 0.292

6.579 ± 0.587

1.515 ± 0.162

7.19 ± 0.197

6.308 ± 0.385

9.202 ± 0.477

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.482 ± 0.324

6.127 ± 0.509

3.798 ± 0.163

4.183 ± 0.282

5.811 ± 0.556

6.851 ± 0.34

6.692 ± 0.422

4.612 ± 0.37

1.515 ± 0.167

2.894 ± 0.251
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski