Emmonsia sp. CAC-2015a

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Emergomyces

Average proteome isoelectric point is 6.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8745 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B7P0N1|A0A1B7P0N1_9EURO CMGC/CDK/CDK8 protein kinase OS=Emmonsia sp. CAC-2015a OX=1658172 GN=ACJ72_03223 PE=4 SV=1
MM1 pKa = 7.61KK2 pKa = 10.5SNEE5 pKa = 4.08PLHH8 pKa = 6.72CILRR12 pKa = 11.84LEE14 pKa = 4.26RR15 pKa = 11.84LLYY18 pKa = 9.01WRR20 pKa = 11.84PEE22 pKa = 3.85LGTTPGHH29 pKa = 7.1LGEE32 pKa = 4.5AWEE35 pKa = 4.78APSGLHH41 pKa = 5.88RR42 pKa = 11.84FEE44 pKa = 4.83SVSILCACSTRR55 pKa = 11.84ISDD58 pKa = 3.93YY59 pKa = 11.56DD60 pKa = 4.65DD61 pKa = 5.08GDD63 pKa = 5.23DD64 pKa = 4.48YY65 pKa = 12.06DD66 pKa = 6.42DD67 pKa = 6.03YY68 pKa = 12.06DD69 pKa = 6.67DD70 pKa = 6.6DD71 pKa = 7.43DD72 pKa = 7.21DD73 pKa = 7.35DD74 pKa = 5.92DD75 pKa = 4.76VVDD78 pKa = 4.15GGGGGSLVTAA88 pKa = 5.21

Molecular weight: 9.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B7NLI4|A0A1B7NLI4_9EURO Uncharacterized protein OS=Emmonsia sp. CAC-2015a OX=1658172 GN=ACJ72_08214 PE=4 SV=1
MM1 pKa = 7.12TLSRR5 pKa = 11.84LPLTRR10 pKa = 11.84LSMMVFSSKK19 pKa = 10.3PMPSTLPHH27 pKa = 5.82VSAALRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84MPQII39 pKa = 3.48

Molecular weight: 4.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8745

0

8745

3939199

30

5889

450.5

49.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.979 ± 0.021

1.172 ± 0.009

5.625 ± 0.018

6.222 ± 0.027

3.625 ± 0.018

6.735 ± 0.027

2.466 ± 0.012

5.085 ± 0.016

5.022 ± 0.023

8.829 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.08 ± 0.011

3.99 ± 0.013

6.355 ± 0.029

4.095 ± 0.019

6.294 ± 0.022

8.768 ± 0.034

5.942 ± 0.02

5.773 ± 0.019

1.288 ± 0.011

2.654 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski