Cryptosporidium parvum virus 1 (strain KSU-1)

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Cryspovirus; Cryptosporidium parvum virus 1

Average proteome isoelectric point is 7.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|O15926|CAPSD_CPVKS Capsid protein OS=Cryptosporidium parvum virus 1 (strain KSU-1) OX=766191 PE=3 SV=1
MM1 pKa = 6.86ITSFEE6 pKa = 4.33SIEE9 pKa = 4.24KK10 pKa = 10.25KK11 pKa = 10.13NAVYY15 pKa = 10.85YY16 pKa = 10.09PVDD19 pKa = 3.83LKK21 pKa = 11.19FVTDD25 pKa = 4.48LSSDD29 pKa = 3.75LSNTADD35 pKa = 3.45GLGQAWYY42 pKa = 9.68KK43 pKa = 9.96ISQVAVEE50 pKa = 4.83HH51 pKa = 6.98IILTALKK58 pKa = 9.58INYY61 pKa = 8.35VLNHH65 pKa = 5.94RR66 pKa = 11.84TLLLIYY72 pKa = 9.68NKK74 pKa = 9.91KK75 pKa = 9.59VPDD78 pKa = 3.55MDD80 pKa = 5.81LINIIQSSIMVPRR93 pKa = 11.84FVRR96 pKa = 11.84DD97 pKa = 4.0LIRR100 pKa = 11.84EE101 pKa = 4.07ILRR104 pKa = 11.84PMHH107 pKa = 6.58HH108 pKa = 6.69SGITYY113 pKa = 10.0IPDD116 pKa = 3.93LDD118 pKa = 4.3LSTRR122 pKa = 11.84PTPHH126 pKa = 7.38LLDD129 pKa = 3.31TFYY132 pKa = 10.66PIAEE136 pKa = 4.42HH137 pKa = 5.41LTRR140 pKa = 11.84WNNVCQKK147 pKa = 10.48LGFEE151 pKa = 4.64MVPILPEE158 pKa = 3.98AVQSVSLTFYY168 pKa = 10.79SYY170 pKa = 10.01EE171 pKa = 4.0TDD173 pKa = 3.19EE174 pKa = 5.57LLSFDD179 pKa = 4.89NLINLDD185 pKa = 3.26WRR187 pKa = 11.84IEE189 pKa = 3.93AFGWTKK195 pKa = 10.68HH196 pKa = 5.83LVHH199 pKa = 6.7NPTSEE204 pKa = 3.74VDD206 pKa = 3.65EE207 pKa = 4.81LGKK210 pKa = 10.41SQTATSRR217 pKa = 11.84KK218 pKa = 8.62RR219 pKa = 11.84VQEE222 pKa = 3.74KK223 pKa = 10.46DD224 pKa = 3.55YY225 pKa = 11.36EE226 pKa = 4.83CDD228 pKa = 3.38DD229 pKa = 3.47FRR231 pKa = 11.84KK232 pKa = 10.17VYY234 pKa = 9.74EE235 pKa = 4.31RR236 pKa = 11.84PLQNRR241 pKa = 11.84RR242 pKa = 11.84ILGMIVYY249 pKa = 9.77RR250 pKa = 11.84YY251 pKa = 7.17TCAPYY256 pKa = 10.54TMRR259 pKa = 11.84LGHH262 pKa = 7.15LSPNCRR268 pKa = 11.84FPTEE272 pKa = 4.38KK273 pKa = 10.25NHH275 pKa = 6.78SEE277 pKa = 4.15TPPTSNRR284 pKa = 11.84VLLSEE289 pKa = 3.85QTMVHH294 pKa = 6.68SIQKK298 pKa = 9.38NRR300 pKa = 11.84SKK302 pKa = 10.45PKK304 pKa = 8.99KK305 pKa = 8.57VKK307 pKa = 10.18IVTTEE312 pKa = 3.97CSADD316 pKa = 3.57RR317 pKa = 11.84SHH319 pKa = 7.26

Molecular weight: 37.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|O15926|CAPSD_CPVKS Capsid protein OS=Cryptosporidium parvum virus 1 (strain KSU-1) OX=766191 PE=3 SV=1
MM1 pKa = 7.41KK2 pKa = 10.09FVNIYY7 pKa = 9.6EE8 pKa = 4.09IQRR11 pKa = 11.84FDD13 pKa = 3.65GQPTRR18 pKa = 11.84HH19 pKa = 6.29GIAPKK24 pKa = 10.24KK25 pKa = 9.93IFRR28 pKa = 11.84SKK30 pKa = 10.75YY31 pKa = 8.63IPTGLVPRR39 pKa = 11.84LKK41 pKa = 10.01YY42 pKa = 9.66WRR44 pKa = 11.84DD45 pKa = 3.29VPSRR49 pKa = 11.84AEE51 pKa = 3.55MSKK54 pKa = 10.65RR55 pKa = 11.84IGKK58 pKa = 9.31YY59 pKa = 9.85FEE61 pKa = 5.87DD62 pKa = 3.71EE63 pKa = 4.3FKK65 pKa = 10.67FYY67 pKa = 10.61PNEE70 pKa = 3.92EE71 pKa = 4.29KK72 pKa = 11.02LNEE75 pKa = 4.07AVNIVQEE82 pKa = 4.26KK83 pKa = 8.98WISHH87 pKa = 6.06YY88 pKa = 9.49GTSLNVTSVSEE99 pKa = 4.33SFRR102 pKa = 11.84TLPKK106 pKa = 9.45STSAGLPFKK115 pKa = 10.71SGCTKK120 pKa = 10.57YY121 pKa = 9.93EE122 pKa = 3.75ARR124 pKa = 11.84NKK126 pKa = 9.12MMRR129 pKa = 11.84FARR132 pKa = 11.84SQWDD136 pKa = 3.57RR137 pKa = 11.84VSKK140 pKa = 10.2EE141 pKa = 3.64LQLQVLPCRR150 pKa = 11.84LGARR154 pKa = 11.84CQLRR158 pKa = 11.84KK159 pKa = 9.98RR160 pKa = 11.84GEE162 pKa = 4.02NKK164 pKa = 9.47PRR166 pKa = 11.84LIWAYY171 pKa = 9.41PGYY174 pKa = 10.83LSIIEE179 pKa = 4.16NQYY182 pKa = 8.77LTAIKK187 pKa = 9.95KK188 pKa = 8.94VPPPNFIGWSTNWLDD203 pKa = 3.94GGKK206 pKa = 9.65SLNRR210 pKa = 11.84LLFGDD215 pKa = 3.26KK216 pKa = 8.38WTWQSIAQIDD226 pKa = 4.29FSSFDD231 pKa = 3.15ATVRR235 pKa = 11.84TEE237 pKa = 4.68LIFHH241 pKa = 7.16AFKK244 pKa = 10.69ILRR247 pKa = 11.84SLFDD251 pKa = 3.16LTRR254 pKa = 11.84TEE256 pKa = 5.79NIMLDD261 pKa = 3.47QLRR264 pKa = 11.84HH265 pKa = 4.97YY266 pKa = 9.77FINTPILFYY275 pKa = 11.29DD276 pKa = 4.11KK277 pKa = 10.58IIVKK281 pKa = 9.98NRR283 pKa = 11.84GIPSGSAFTQIIGTIVNMIACQYY306 pKa = 10.82ASLRR310 pKa = 11.84SRR312 pKa = 11.84DD313 pKa = 3.61YY314 pKa = 11.0NLRR317 pKa = 11.84IPFSCWLGDD326 pKa = 3.55DD327 pKa = 3.76SFLNFEE333 pKa = 4.29TALCRR338 pKa = 11.84QEE340 pKa = 5.24FEE342 pKa = 3.84YY343 pKa = 10.73DD344 pKa = 3.42YY345 pKa = 11.59LEE347 pKa = 4.26KK348 pKa = 10.76FKK350 pKa = 11.04EE351 pKa = 3.91LGLNVSIDD359 pKa = 3.34KK360 pKa = 9.0THH362 pKa = 5.42YY363 pKa = 4.91TTRR366 pKa = 11.84FIDD369 pKa = 3.83DD370 pKa = 3.52FEE372 pKa = 4.74VRR374 pKa = 11.84FKK376 pKa = 11.06GVRR379 pKa = 11.84PYY381 pKa = 11.53VKK383 pKa = 10.34FLGKK387 pKa = 10.44QIDD390 pKa = 3.6ILLDD394 pKa = 3.52LTFHH398 pKa = 7.21NDD400 pKa = 3.13LDD402 pKa = 4.16KK403 pKa = 11.6LDD405 pKa = 4.16AQMALPEE412 pKa = 4.58KK413 pKa = 9.71EE414 pKa = 4.61DD415 pKa = 3.43LSAYY419 pKa = 6.32EE420 pKa = 3.96TGVRR424 pKa = 11.84LIGLVWAYY432 pKa = 9.83GAHH435 pKa = 5.67YY436 pKa = 10.11DD437 pKa = 3.21IYY439 pKa = 11.33LRR441 pKa = 11.84ILKK444 pKa = 10.23VYY446 pKa = 10.63LSLKK450 pKa = 9.77LKK452 pKa = 10.71PEE454 pKa = 3.85FHH456 pKa = 6.04VQQLLSYY463 pKa = 9.24SEE465 pKa = 4.07KK466 pKa = 9.94PEE468 pKa = 3.68RR469 pKa = 11.84TKK471 pKa = 10.5RR472 pKa = 11.84YY473 pKa = 9.12QEE475 pKa = 4.03NFFSSMKK482 pKa = 10.19YY483 pKa = 9.78QLNLDD488 pKa = 3.74LDD490 pKa = 4.15IYY492 pKa = 11.44DD493 pKa = 4.95LLAFPKK499 pKa = 10.35FWDD502 pKa = 3.24VSNRR506 pKa = 11.84YY507 pKa = 8.86FGSKK511 pKa = 8.98YY512 pKa = 9.7EE513 pKa = 3.99RR514 pKa = 11.84LDD516 pKa = 3.6FRR518 pKa = 11.84SHH520 pKa = 7.25KK521 pKa = 10.48IYY523 pKa = 11.0GG524 pKa = 3.49

Molecular weight: 61.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

843

319

524

421.5

49.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.915 ± 0.247

1.305 ± 0.139

5.694 ± 0.027

5.694 ± 0.139

5.457 ± 1.231

4.033 ± 0.809

2.491 ± 0.674

7.117 ± 0.049

7.117 ± 0.616

10.558 ± 0.113

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.898 ± 0.323

4.508 ± 0.269

4.745 ± 0.476

3.559 ± 0.225

6.762 ± 0.261

7.236 ± 0.319

5.694 ± 0.97

5.219 ± 0.889

1.779 ± 0.279

5.219 ± 0.441
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski