Amino acid dipepetide frequency for Nylanderia fulva virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.569AlaAla: 5.569 ± 0.0
1.114AlaCys: 1.114 ± 0.0
3.063AlaAsp: 3.063 ± 0.0
2.228AlaGlu: 2.228 ± 0.0
2.506AlaPhe: 2.506 ± 0.0
3.342AlaGly: 3.342 ± 0.0
2.785AlaHis: 2.785 ± 0.0
2.785AlaIle: 2.785 ± 0.0
3.62AlaLys: 3.62 ± 0.0
5.291AlaLeu: 5.291 ± 0.0
1.949AlaMet: 1.949 ± 0.0
5.013AlaAsn: 5.013 ± 0.0
2.785AlaPro: 2.785 ± 0.0
1.671AlaGln: 1.671 ± 0.0
2.785AlaArg: 2.785 ± 0.0
3.899AlaSer: 3.899 ± 0.0
3.342AlaThr: 3.342 ± 0.0
5.013AlaVal: 5.013 ± 0.0
0.835AlaTrp: 0.835 ± 0.0
1.392AlaTyr: 1.392 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.557CysAla: 0.557 ± 0.0
0.278CysCys: 0.278 ± 0.0
1.392CysAsp: 1.392 ± 0.0
1.114CysGlu: 1.114 ± 0.0
0.278CysPhe: 0.278 ± 0.0
1.114CysGly: 1.114 ± 0.0
0.278CysHis: 0.278 ± 0.0
0.557CysIle: 0.557 ± 0.0
0.557CysLys: 0.557 ± 0.0
1.392CysLeu: 1.392 ± 0.0
1.671CysMet: 1.671 ± 0.0
0.557CysAsn: 0.557 ± 0.0
0.557CysPro: 0.557 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.835CysArg: 0.835 ± 0.0
0.557CysSer: 0.557 ± 0.0
1.114CysThr: 1.114 ± 0.0
0.278CysVal: 0.278 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.278CysTyr: 0.278 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.506AspAla: 2.506 ± 0.0
1.392AspCys: 1.392 ± 0.0
2.506AspAsp: 2.506 ± 0.0
6.126AspGlu: 6.126 ± 0.0
3.063AspPhe: 3.063 ± 0.0
3.62AspGly: 3.62 ± 0.0
1.671AspHis: 1.671 ± 0.0
3.62AspIle: 3.62 ± 0.0
3.342AspLys: 3.342 ± 0.0
6.126AspLeu: 6.126 ± 0.0
1.114AspMet: 1.114 ± 0.0
1.392AspAsn: 1.392 ± 0.0
2.785AspPro: 2.785 ± 0.0
2.228AspGln: 2.228 ± 0.0
0.835AspArg: 0.835 ± 0.0
3.899AspSer: 3.899 ± 0.0
4.456AspThr: 4.456 ± 0.0
2.228AspVal: 2.228 ± 0.0
0.835AspTrp: 0.835 ± 0.0
2.228AspTyr: 2.228 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.342GluAla: 3.342 ± 0.0
0.557GluCys: 0.557 ± 0.0
4.177GluAsp: 4.177 ± 0.0
3.62GluGlu: 3.62 ± 0.0
2.506GluPhe: 2.506 ± 0.0
4.456GluGly: 4.456 ± 0.0
1.392GluHis: 1.392 ± 0.0
4.734GluIle: 4.734 ± 0.0
4.734GluLys: 4.734 ± 0.0
5.013GluLeu: 5.013 ± 0.0
2.506GluMet: 2.506 ± 0.0
2.228GluAsn: 2.228 ± 0.0
4.177GluPro: 4.177 ± 0.0
2.228GluGln: 2.228 ± 0.0
1.114GluArg: 1.114 ± 0.0
1.949GluSer: 1.949 ± 0.0
3.899GluThr: 3.899 ± 0.0
3.063GluVal: 3.063 ± 0.0
0.278GluTrp: 0.278 ± 0.0
1.392GluTyr: 1.392 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.671PheAla: 1.671 ± 0.0
0.557PheCys: 0.557 ± 0.0
6.962PheAsp: 6.962 ± 0.0
2.506PheGlu: 2.506 ± 0.0
1.949PhePhe: 1.949 ± 0.0
3.62PheGly: 3.62 ± 0.0
1.114PheHis: 1.114 ± 0.0
2.506PheIle: 2.506 ± 0.0
1.671PheLys: 1.671 ± 0.0
4.734PheLeu: 4.734 ± 0.0
0.557PheMet: 0.557 ± 0.0
4.734PheAsn: 4.734 ± 0.0
1.671PhePro: 1.671 ± 0.0
3.342PheGln: 3.342 ± 0.0
1.949PheArg: 1.949 ± 0.0
5.291PheSer: 5.291 ± 0.0
3.063PheThr: 3.063 ± 0.0
6.405PheVal: 6.405 ± 0.0
1.392PheTrp: 1.392 ± 0.0
1.671PheTyr: 1.671 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.177GlyAla: 4.177 ± 0.0
0.557GlyCys: 0.557 ± 0.0
2.785GlyAsp: 2.785 ± 0.0
3.899GlyGlu: 3.899 ± 0.0
1.949GlyPhe: 1.949 ± 0.0
5.291GlyGly: 5.291 ± 0.0
0.835GlyHis: 0.835 ± 0.0
5.013GlyIle: 5.013 ± 0.0
4.456GlyLys: 4.456 ± 0.0
4.177GlyLeu: 4.177 ± 0.0
2.228GlyMet: 2.228 ± 0.0
4.734GlyAsn: 4.734 ± 0.0
2.228GlyPro: 2.228 ± 0.0
0.278GlyGln: 0.278 ± 0.0
3.063GlyArg: 3.063 ± 0.0
5.291GlySer: 5.291 ± 0.0
5.013GlyThr: 5.013 ± 0.0
5.569GlyVal: 5.569 ± 0.0
1.114GlyTrp: 1.114 ± 0.0
3.063GlyTyr: 3.063 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.557HisAla: 0.557 ± 0.0
0.557HisCys: 0.557 ± 0.0
0.278HisAsp: 0.278 ± 0.0
2.228HisGlu: 2.228 ± 0.0
2.506HisPhe: 2.506 ± 0.0
1.392HisGly: 1.392 ± 0.0
0.557HisHis: 0.557 ± 0.0
1.671HisIle: 1.671 ± 0.0
0.557HisLys: 0.557 ± 0.0
2.785HisLeu: 2.785 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.114HisAsn: 1.114 ± 0.0
0.835HisPro: 0.835 ± 0.0
0.835HisGln: 0.835 ± 0.0
1.114HisArg: 1.114 ± 0.0
1.671HisSer: 1.671 ± 0.0
1.392HisThr: 1.392 ± 0.0
2.228HisVal: 2.228 ± 0.0
0.0HisTrp: 0.0 ± 0.0
0.835HisTyr: 0.835 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.177IleAla: 4.177 ± 0.0
0.557IleCys: 0.557 ± 0.0
2.506IleAsp: 2.506 ± 0.0
1.949IleGlu: 1.949 ± 0.0
4.734IlePhe: 4.734 ± 0.0
5.569IleGly: 5.569 ± 0.0
0.278IleHis: 0.278 ± 0.0
4.177IleIle: 4.177 ± 0.0
2.506IleLys: 2.506 ± 0.0
3.342IleLeu: 3.342 ± 0.0
0.557IleMet: 0.557 ± 0.0
1.949IleAsn: 1.949 ± 0.0
2.785IlePro: 2.785 ± 0.0
2.228IleGln: 2.228 ± 0.0
2.228IleArg: 2.228 ± 0.0
5.569IleSer: 5.569 ± 0.0
3.342IleThr: 3.342 ± 0.0
2.785IleVal: 2.785 ± 0.0
0.557IleTrp: 0.557 ± 0.0
2.785IleTyr: 2.785 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.569LysAla: 5.569 ± 0.0
0.557LysCys: 0.557 ± 0.0
5.013LysAsp: 5.013 ± 0.0
3.899LysGlu: 3.899 ± 0.0
4.177LysPhe: 4.177 ± 0.0
2.785LysGly: 2.785 ± 0.0
2.228LysHis: 2.228 ± 0.0
3.899LysIle: 3.899 ± 0.0
3.62LysLys: 3.62 ± 0.0
5.569LysLeu: 5.569 ± 0.0
2.785LysMet: 2.785 ± 0.0
1.949LysAsn: 1.949 ± 0.0
1.671LysPro: 1.671 ± 0.0
1.949LysGln: 1.949 ± 0.0
1.392LysArg: 1.392 ± 0.0
4.456LysSer: 4.456 ± 0.0
3.063LysThr: 3.063 ± 0.0
3.62LysVal: 3.62 ± 0.0
0.835LysTrp: 0.835 ± 0.0
2.228LysTyr: 2.228 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.126LeuAla: 6.126 ± 0.0
0.278LeuCys: 0.278 ± 0.0
2.785LeuAsp: 2.785 ± 0.0
4.177LeuGlu: 4.177 ± 0.0
3.899LeuPhe: 3.899 ± 0.0
5.013LeuGly: 5.013 ± 0.0
2.506LeuHis: 2.506 ± 0.0
4.456LeuIle: 4.456 ± 0.0
4.734LeuLys: 4.734 ± 0.0
7.797LeuLeu: 7.797 ± 0.0
0.835LeuMet: 0.835 ± 0.0
7.519LeuAsn: 7.519 ± 0.0
3.899LeuPro: 3.899 ± 0.0
4.456LeuGln: 4.456 ± 0.0
3.899LeuArg: 3.899 ± 0.0
5.013LeuSer: 5.013 ± 0.0
5.848LeuThr: 5.848 ± 0.0
3.62LeuVal: 3.62 ± 0.0
1.671LeuTrp: 1.671 ± 0.0
2.506LeuTyr: 2.506 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.228MetAla: 2.228 ± 0.0
1.114MetCys: 1.114 ± 0.0
1.392MetAsp: 1.392 ± 0.0
3.063MetGlu: 3.063 ± 0.0
1.392MetPhe: 1.392 ± 0.0
1.392MetGly: 1.392 ± 0.0
0.278MetHis: 0.278 ± 0.0
0.557MetIle: 0.557 ± 0.0
1.671MetLys: 1.671 ± 0.0
1.392MetLeu: 1.392 ± 0.0
0.557MetMet: 0.557 ± 0.0
1.392MetAsn: 1.392 ± 0.0
0.835MetPro: 0.835 ± 0.0
0.835MetGln: 0.835 ± 0.0
1.392MetArg: 1.392 ± 0.0
2.228MetSer: 2.228 ± 0.0
1.671MetThr: 1.671 ± 0.0
1.949MetVal: 1.949 ± 0.0
0.278MetTrp: 0.278 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.899AsnAla: 3.899 ± 0.0
0.557AsnCys: 0.557 ± 0.0
3.342AsnAsp: 3.342 ± 0.0
2.228AsnGlu: 2.228 ± 0.0
3.063AsnPhe: 3.063 ± 0.0
4.177AsnGly: 4.177 ± 0.0
1.392AsnHis: 1.392 ± 0.0
3.063AsnIle: 3.063 ± 0.0
3.342AsnLys: 3.342 ± 0.0
5.291AsnLeu: 5.291 ± 0.0
0.835AsnMet: 0.835 ± 0.0
4.734AsnAsn: 4.734 ± 0.0
3.063AsnPro: 3.063 ± 0.0
3.899AsnGln: 3.899 ± 0.0
2.785AsnArg: 2.785 ± 0.0
3.62AsnSer: 3.62 ± 0.0
2.785AsnThr: 2.785 ± 0.0
4.734AsnVal: 4.734 ± 0.0
0.835AsnTrp: 0.835 ± 0.0
2.785AsnTyr: 2.785 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.949ProAla: 1.949 ± 0.0
0.557ProCys: 0.557 ± 0.0
2.228ProAsp: 2.228 ± 0.0
2.506ProGlu: 2.506 ± 0.0
1.949ProPhe: 1.949 ± 0.0
2.228ProGly: 2.228 ± 0.0
0.0ProHis: 0.0 ± 0.0
2.228ProIle: 2.228 ± 0.0
2.506ProLys: 2.506 ± 0.0
3.342ProLeu: 3.342 ± 0.0
1.392ProMet: 1.392 ± 0.0
2.228ProAsn: 2.228 ± 0.0
2.228ProPro: 2.228 ± 0.0
3.063ProGln: 3.063 ± 0.0
1.671ProArg: 1.671 ± 0.0
3.899ProSer: 3.899 ± 0.0
4.456ProThr: 4.456 ± 0.0
3.62ProVal: 3.62 ± 0.0
0.835ProTrp: 0.835 ± 0.0
1.949ProTyr: 1.949 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.342GlnAla: 3.342 ± 0.0
0.557GlnCys: 0.557 ± 0.0
1.114GlnAsp: 1.114 ± 0.0
3.342GlnGlu: 3.342 ± 0.0
3.62GlnPhe: 3.62 ± 0.0
1.671GlnGly: 1.671 ± 0.0
1.392GlnHis: 1.392 ± 0.0
2.506GlnIle: 2.506 ± 0.0
3.62GlnLys: 3.62 ± 0.0
3.063GlnLeu: 3.063 ± 0.0
0.835GlnMet: 0.835 ± 0.0
2.228GlnAsn: 2.228 ± 0.0
0.557GlnPro: 0.557 ± 0.0
1.671GlnGln: 1.671 ± 0.0
1.949GlnArg: 1.949 ± 0.0
2.785GlnSer: 2.785 ± 0.0
2.506GlnThr: 2.506 ± 0.0
1.671GlnVal: 1.671 ± 0.0
0.557GlnTrp: 0.557 ± 0.0
0.278GlnTyr: 0.278 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.063ArgAla: 3.063 ± 0.0
0.557ArgCys: 0.557 ± 0.0
2.228ArgAsp: 2.228 ± 0.0
1.949ArgGlu: 1.949 ± 0.0
3.063ArgPhe: 3.063 ± 0.0
1.949ArgGly: 1.949 ± 0.0
1.114ArgHis: 1.114 ± 0.0
1.671ArgIle: 1.671 ± 0.0
2.785ArgLys: 2.785 ± 0.0
5.013ArgLeu: 5.013 ± 0.0
0.835ArgMet: 0.835 ± 0.0
1.671ArgAsn: 1.671 ± 0.0
1.949ArgPro: 1.949 ± 0.0
1.671ArgGln: 1.671 ± 0.0
1.114ArgArg: 1.114 ± 0.0
2.506ArgSer: 2.506 ± 0.0
3.342ArgThr: 3.342 ± 0.0
3.063ArgVal: 3.063 ± 0.0
0.835ArgTrp: 0.835 ± 0.0
2.506ArgTyr: 2.506 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.899SerAla: 3.899 ± 0.0
0.557SerCys: 0.557 ± 0.0
5.848SerAsp: 5.848 ± 0.0
1.392SerGlu: 1.392 ± 0.0
4.734SerPhe: 4.734 ± 0.0
6.962SerGly: 6.962 ± 0.0
1.671SerHis: 1.671 ± 0.0
3.899SerIle: 3.899 ± 0.0
4.456SerLys: 4.456 ± 0.0
6.683SerLeu: 6.683 ± 0.0
3.063SerMet: 3.063 ± 0.0
1.671SerAsn: 1.671 ± 0.0
2.228SerPro: 2.228 ± 0.0
1.949SerGln: 1.949 ± 0.0
4.456SerArg: 4.456 ± 0.0
5.848SerSer: 5.848 ± 0.0
2.506SerThr: 2.506 ± 0.0
5.569SerVal: 5.569 ± 0.0
1.949SerTrp: 1.949 ± 0.0
1.671SerTyr: 1.671 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.785ThrAla: 2.785 ± 0.0
0.835ThrCys: 0.835 ± 0.0
3.063ThrAsp: 3.063 ± 0.0
3.063ThrGlu: 3.063 ± 0.0
5.569ThrPhe: 5.569 ± 0.0
3.62ThrGly: 3.62 ± 0.0
0.557ThrHis: 0.557 ± 0.0
3.063ThrIle: 3.063 ± 0.0
4.734ThrLys: 4.734 ± 0.0
4.456ThrLeu: 4.456 ± 0.0
1.114ThrMet: 1.114 ± 0.0
5.569ThrAsn: 5.569 ± 0.0
1.671ThrPro: 1.671 ± 0.0
3.342ThrGln: 3.342 ± 0.0
3.899ThrArg: 3.899 ± 0.0
4.177ThrSer: 4.177 ± 0.0
5.291ThrThr: 5.291 ± 0.0
4.734ThrVal: 4.734 ± 0.0
1.114ThrTrp: 1.114 ± 0.0
2.228ThrTyr: 2.228 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
2.506ValAla: 2.506 ± 0.0
0.835ValCys: 0.835 ± 0.0
3.62ValAsp: 3.62 ± 0.0
4.734ValGlu: 4.734 ± 0.0
2.785ValPhe: 2.785 ± 0.0
3.62ValGly: 3.62 ± 0.0
1.671ValHis: 1.671 ± 0.0
2.506ValIle: 2.506 ± 0.0
5.569ValLys: 5.569 ± 0.0
2.506ValLeu: 2.506 ± 0.0
1.114ValMet: 1.114 ± 0.0
6.962ValAsn: 6.962 ± 0.0
6.126ValPro: 6.126 ± 0.0
2.228ValGln: 2.228 ± 0.0
4.456ValArg: 4.456 ± 0.0
5.013ValSer: 5.013 ± 0.0
4.734ValThr: 4.734 ± 0.0
6.405ValVal: 6.405 ± 0.0
0.278ValTrp: 0.278 ± 0.0
2.785ValTyr: 2.785 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.114TrpAla: 1.114 ± 0.0
0.278TrpCys: 0.278 ± 0.0
0.557TrpAsp: 0.557 ± 0.0
1.949TrpGlu: 1.949 ± 0.0
0.557TrpPhe: 0.557 ± 0.0
1.671TrpGly: 1.671 ± 0.0
0.278TrpHis: 0.278 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.835TrpLys: 0.835 ± 0.0
0.278TrpLeu: 0.278 ± 0.0
0.0TrpMet: 0.0 ± 0.0
1.114TrpAsn: 1.114 ± 0.0
0.557TrpPro: 0.557 ± 0.0
0.557TrpGln: 0.557 ± 0.0
0.278TrpArg: 0.278 ± 0.0
1.114TrpSer: 1.114 ± 0.0
1.392TrpThr: 1.392 ± 0.0
1.671TrpVal: 1.671 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.835TrpTyr: 0.835 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.228TyrAla: 2.228 ± 0.0
1.114TyrCys: 1.114 ± 0.0
1.114TyrAsp: 1.114 ± 0.0
1.392TyrGlu: 1.392 ± 0.0
3.063TyrPhe: 3.063 ± 0.0
2.228TyrGly: 2.228 ± 0.0
1.114TyrHis: 1.114 ± 0.0
1.671TyrIle: 1.671 ± 0.0
1.949TyrLys: 1.949 ± 0.0
2.785TyrLeu: 2.785 ± 0.0
1.392TyrMet: 1.392 ± 0.0
1.671TyrAsn: 1.671 ± 0.0
2.228TyrPro: 2.228 ± 0.0
0.835TyrGln: 0.835 ± 0.0
1.671TyrArg: 1.671 ± 0.0
2.228TyrSer: 2.228 ± 0.0
1.671TyrThr: 1.671 ± 0.0
2.228TyrVal: 2.228 ± 0.0
0.835TyrTrp: 0.835 ± 0.0
1.392TyrTyr: 1.392 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3592 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski