Candidatus Chloroploca asiatica

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Candidatus Chloroploca

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4456 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H3KNG9|A0A2H3KNG9_9CHLR NADPH quinone oxidoreductase OS=Candidatus Chloroploca asiatica OX=1506545 GN=A9Q02_00100 PE=4 SV=1
MM1 pKa = 7.73KK2 pKa = 10.51LRR4 pKa = 11.84MTILSALLMGMLVLAACGTAPSTGSTTEE32 pKa = 3.85PTPATTEE39 pKa = 3.67QEE41 pKa = 4.43TPVTEE46 pKa = 4.15EE47 pKa = 3.65ATTPEE52 pKa = 4.41ASDD55 pKa = 3.79ALAGTSWVLTQLNGAAPLSEE75 pKa = 4.14GTPISAEE82 pKa = 3.75FDD84 pKa = 3.78TEE86 pKa = 4.33GSVAGSAGCNRR97 pKa = 11.84YY98 pKa = 8.49FAGYY102 pKa = 8.16TIADD106 pKa = 3.81GTLSITQAGSTMMACEE122 pKa = 4.23DD123 pKa = 4.16AIMAQEE129 pKa = 4.26QAFLDD134 pKa = 3.71QFSRR138 pKa = 11.84ATSYY142 pKa = 11.44VIDD145 pKa = 4.4GATLTITIDD154 pKa = 3.68DD155 pKa = 3.9GTTLVFEE162 pKa = 4.45RR163 pKa = 11.84AEE165 pKa = 4.22EE166 pKa = 4.04EE167 pKa = 4.43VTTSNDD173 pKa = 3.03LTGTNWVLTAINGAAPLSEE192 pKa = 4.38SAPISAEE199 pKa = 3.28FDD201 pKa = 3.35TEE203 pKa = 4.07GRR205 pKa = 11.84ITGSAGCNRR214 pKa = 11.84YY215 pKa = 8.65FADD218 pKa = 3.51YY219 pKa = 9.59TVADD223 pKa = 4.1GTLSISQAGSTRR235 pKa = 11.84MACEE239 pKa = 3.9EE240 pKa = 4.46AIMAQEE246 pKa = 4.29QAFLDD251 pKa = 3.73QLSRR255 pKa = 11.84ATSYY259 pKa = 11.43VIDD262 pKa = 4.4GATLTITIDD271 pKa = 3.65DD272 pKa = 4.2GATLVFEE279 pKa = 4.4QTSNALAGTSWLLTEE294 pKa = 5.17LNGAAPLSEE303 pKa = 4.31ATPISAEE310 pKa = 3.75FDD312 pKa = 3.54DD313 pKa = 4.57EE314 pKa = 4.54GRR316 pKa = 11.84VAGSAGCNRR325 pKa = 11.84YY326 pKa = 8.51FAGYY330 pKa = 7.35TVAEE334 pKa = 4.53GTLSITQAGSTMMACEE350 pKa = 4.08DD351 pKa = 4.48AILAQEE357 pKa = 4.17MAFLDD362 pKa = 3.69QLSRR366 pKa = 11.84ATSYY370 pKa = 11.45VIDD373 pKa = 4.12GTTLTITVDD382 pKa = 3.47DD383 pKa = 4.49GATLVFVRR391 pKa = 11.84AA392 pKa = 3.97

Molecular weight: 40.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H3KKB4|A0A2H3KKB4_9CHLR ATPase/protein kinase OS=Candidatus Chloroploca asiatica OX=1506545 GN=A9Q02_15515 PE=3 SV=1
MM1 pKa = 7.38AAAPIGPAGAMPAPANGRR19 pKa = 11.84IPGSDD24 pKa = 2.93RR25 pKa = 11.84SIHH28 pKa = 5.67ARR30 pKa = 11.84AIASSVYY37 pKa = 10.44APRR40 pKa = 11.84QGTRR44 pKa = 11.84KK45 pKa = 8.34GTRR48 pKa = 11.84KK49 pKa = 8.47GTRR52 pKa = 11.84KK53 pKa = 8.47GTRR56 pKa = 11.84KK57 pKa = 8.47GTRR60 pKa = 11.84KK61 pKa = 8.47GTRR64 pKa = 11.84KK65 pKa = 8.47GTRR68 pKa = 11.84KK69 pKa = 8.47GTRR72 pKa = 11.84KK73 pKa = 8.47GTRR76 pKa = 11.84KK77 pKa = 8.47GTRR80 pKa = 11.84KK81 pKa = 8.47GTRR84 pKa = 11.84KK85 pKa = 8.5GTRR88 pKa = 11.84KK89 pKa = 10.05GG90 pKa = 3.32

Molecular weight: 9.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4456

0

4456

1658142

52

4279

372.1

40.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.531 ± 0.055

0.785 ± 0.011

5.044 ± 0.03

5.672 ± 0.036

3.355 ± 0.022

7.883 ± 0.04

2.223 ± 0.021

5.0 ± 0.031

1.866 ± 0.026

11.816 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.146 ± 0.017

2.597 ± 0.031

5.814 ± 0.029

4.209 ± 0.027

7.145 ± 0.037

4.975 ± 0.029

6.148 ± 0.052

7.628 ± 0.031

1.513 ± 0.019

2.65 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski