Candidatus Arsenophonus lipoptenae

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Arsenophonus

Average proteome isoelectric point is 8.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 625 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0X9VZM2|A0A0X9VZM2_9GAMM ATP-dependent lipid A-core flippase OS=Candidatus Arsenophonus lipoptenae OX=634113 GN=msbA_1 PE=3 SV=1
MM1 pKa = 7.37SKK3 pKa = 10.04IGIFFGSDD11 pKa = 2.54TGNTEE16 pKa = 4.47NIAKK20 pKa = 9.13MIQEE24 pKa = 4.24MLDD27 pKa = 3.42DD28 pKa = 4.14SEE30 pKa = 5.2MYY32 pKa = 10.66DD33 pKa = 2.88IAKK36 pKa = 10.24SSKK39 pKa = 10.36EE40 pKa = 3.9DD41 pKa = 3.14IEE43 pKa = 4.36AFNILLFGIPTWYY56 pKa = 10.41YY57 pKa = 11.37GEE59 pKa = 4.64PQCDD63 pKa = 3.14WDD65 pKa = 4.52DD66 pKa = 3.84FFPILEE72 pKa = 4.83EE73 pKa = 3.75IDD75 pKa = 3.94FNNKK79 pKa = 8.45LVAIFGCGDD88 pKa = 3.23QEE90 pKa = 5.5DD91 pKa = 4.26YY92 pKa = 11.48TEE94 pKa = 4.26YY95 pKa = 10.82FCDD98 pKa = 4.58AMGILKK104 pKa = 10.42NIIEE108 pKa = 4.45PNGAIIIGQWPVEE121 pKa = 4.06GYY123 pKa = 10.43YY124 pKa = 10.32FQASKK129 pKa = 11.25GLANDD134 pKa = 3.38THH136 pKa = 6.54FVGLAIDD143 pKa = 4.23EE144 pKa = 4.47DD145 pKa = 4.19RR146 pKa = 11.84QPEE149 pKa = 4.35LTTNRR154 pKa = 11.84VEE156 pKa = 3.97SWIKK160 pKa = 10.56KK161 pKa = 8.34ISKK164 pKa = 9.59EE165 pKa = 3.83INLL168 pKa = 4.04

Molecular weight: 19.2 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0X9WB82|A0A0X9WB82_9GAMM Cell division inhibitor MinD OS=Candidatus Arsenophonus lipoptenae OX=634113 GN=minD PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.53RR3 pKa = 11.84TFQPSILKK11 pKa = 10.25RR12 pKa = 11.84NRR14 pKa = 11.84SHH16 pKa = 7.26GFRR19 pKa = 11.84ARR21 pKa = 11.84MATRR25 pKa = 11.84GGRR28 pKa = 11.84HH29 pKa = 4.23ILARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.15KK38 pKa = 9.73RR39 pKa = 11.84ARR41 pKa = 11.84LAISSKK47 pKa = 11.02

Molecular weight: 5.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

625

0

625

207894

36

1406

332.6

37.81

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.45 ± 0.079

1.158 ± 0.032

4.536 ± 0.057

5.077 ± 0.086

4.392 ± 0.091

5.889 ± 0.085

2.117 ± 0.039

11.788 ± 0.106

8.014 ± 0.093

10.361 ± 0.091

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.276 ± 0.034

6.706 ± 0.086

3.32 ± 0.044

3.6 ± 0.052

4.252 ± 0.067

6.201 ± 0.064

4.822 ± 0.05

5.155 ± 0.082

1.014 ± 0.034

3.872 ± 0.064
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski