Amino acid dipepetide frequency for Yongsan bunyavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.573AlaAla: 5.573 ± 2.314
0.796AlaCys: 0.796 ± 0.371
2.787AlaAsp: 2.787 ± 1.157
3.981AlaGlu: 3.981 ± 0.601
3.981AlaPhe: 3.981 ± 1.828
3.981AlaGly: 3.981 ± 1.828
1.99AlaHis: 1.99 ± 0.927
5.175AlaIle: 5.175 ± 2.5
2.787AlaLys: 2.787 ± 2.385
3.981AlaLeu: 3.981 ± 0.601
1.99AlaMet: 1.99 ± 0.927
1.99AlaAsn: 1.99 ± 0.3
1.99AlaPro: 1.99 ± 1.528
2.389AlaGln: 2.389 ± 2.57
3.583AlaArg: 3.583 ± 3.242
3.981AlaSer: 3.981 ± 1.828
4.777AlaThr: 4.777 ± 3.913
7.564AlaVal: 7.564 ± 2.615
0.398AlaTrp: 0.398 ± 0.185
4.379AlaTyr: 4.379 ± 0.415
0.0AlaXaa: 0.0 ± 0.0
Cys
0.398CysAla: 0.398 ± 0.185
0.398CysCys: 0.398 ± 0.185
2.389CysAsp: 2.389 ± 1.113
0.398CysGlu: 0.398 ± 0.185
0.796CysPhe: 0.796 ± 0.371
0.0CysGly: 0.0 ± 0.0
0.398CysHis: 0.398 ± 0.185
0.0CysIle: 0.0 ± 0.0
0.796CysLys: 0.796 ± 0.371
1.99CysLeu: 1.99 ± 0.3
0.0CysMet: 0.0 ± 0.17
0.796CysAsn: 0.796 ± 0.371
0.0CysPro: 0.0 ± 0.0
0.796CysGln: 0.796 ± 0.371
1.194CysArg: 1.194 ± 0.671
0.796CysSer: 0.796 ± 0.371
2.389CysThr: 2.389 ± 1.343
0.0CysVal: 0.0 ± 0.0
0.398CysTrp: 0.398 ± 0.185
1.194CysTyr: 1.194 ± 0.671
0.0CysXaa: 0.0 ± 0.0
Asp
3.981AspAla: 3.981 ± 0.601
0.0AspCys: 0.0 ± 0.0
5.971AspAsp: 5.971 ± 2.129
2.389AspGlu: 2.389 ± 1.113
2.389AspPhe: 2.389 ± 0.115
2.787AspGly: 2.787 ± 1.298
1.194AspHis: 1.194 ± 0.671
5.971AspIle: 5.971 ± 3.356
7.166AspLys: 7.166 ± 0.345
7.166AspLeu: 7.166 ± 0.345
1.99AspMet: 1.99 ± 1.528
4.379AspAsn: 4.379 ± 2.04
1.99AspPro: 1.99 ± 1.528
1.194AspGln: 1.194 ± 0.671
2.389AspArg: 2.389 ± 0.115
3.185AspSer: 3.185 ± 1.484
4.777AspThr: 4.777 ± 0.23
4.379AspVal: 4.379 ± 2.04
1.194AspTrp: 1.194 ± 0.556
4.379AspTyr: 4.379 ± 2.04
0.0AspXaa: 0.0 ± 0.0
Glu
2.389GluAla: 2.389 ± 0.115
0.398GluCys: 0.398 ± 0.185
5.573GluAsp: 5.573 ± 2.597
5.573GluGlu: 5.573 ± 1.369
2.389GluPhe: 2.389 ± 1.113
0.0GluGly: 0.0 ± 0.0
0.398GluHis: 0.398 ± 0.185
5.971GluIle: 5.971 ± 0.901
4.777GluLys: 4.777 ± 0.998
7.166GluLeu: 7.166 ± 1.572
2.787GluMet: 2.787 ± 0.071
3.583GluAsn: 3.583 ± 0.442
0.796GluPro: 0.796 ± 0.371
1.194GluGln: 1.194 ± 0.556
1.592GluArg: 1.592 ± 0.742
4.379GluSer: 4.379 ± 2.04
5.175GluThr: 5.175 ± 0.044
4.379GluVal: 4.379 ± 2.04
0.398GluTrp: 0.398 ± 0.185
4.379GluTyr: 4.379 ± 0.813
0.0GluXaa: 0.0 ± 0.0
Phe
2.787PheAla: 2.787 ± 0.071
1.592PheCys: 1.592 ± 0.742
1.592PheAsp: 1.592 ± 0.742
1.99PheGlu: 1.99 ± 0.927
0.398PhePhe: 0.398 ± 0.185
0.398PheGly: 0.398 ± 1.042
0.398PheHis: 0.398 ± 0.185
3.583PheIle: 3.583 ± 1.669
4.777PheLys: 4.777 ± 1.457
1.592PheLeu: 1.592 ± 0.742
1.592PheMet: 1.592 ± 0.742
1.99PheAsn: 1.99 ± 0.3
0.398PhePro: 0.398 ± 0.185
0.398PheGln: 0.398 ± 0.185
2.787PheArg: 2.787 ± 1.298
2.389PheSer: 2.389 ± 0.115
1.592PheThr: 1.592 ± 0.742
1.194PheVal: 1.194 ± 0.671
0.0PheTrp: 0.0 ± 0.0
0.796PheTyr: 0.796 ± 0.371
0.0PheXaa: 0.0 ± 0.0
Gly
2.389GlyAla: 2.389 ± 1.343
0.398GlyCys: 0.398 ± 0.185
1.99GlyAsp: 1.99 ± 1.528
1.99GlyGlu: 1.99 ± 0.927
0.796GlyPhe: 0.796 ± 0.371
3.583GlyGly: 3.583 ± 2.014
1.592GlyHis: 1.592 ± 0.742
2.389GlyIle: 2.389 ± 1.113
5.573GlyLys: 5.573 ± 0.141
2.389GlyLeu: 2.389 ± 0.115
1.592GlyMet: 1.592 ± 0.486
0.796GlyAsn: 0.796 ± 0.371
0.796GlyPro: 0.796 ± 0.371
1.592GlyGln: 1.592 ± 1.714
1.194GlyArg: 1.194 ± 0.556
4.379GlySer: 4.379 ± 2.04
2.787GlyThr: 2.787 ± 1.157
3.583GlyVal: 3.583 ± 0.786
0.796GlyTrp: 0.796 ± 0.371
1.194GlyTyr: 1.194 ± 0.556
0.0GlyXaa: 0.0 ± 0.0
His
1.194HisAla: 1.194 ± 0.556
0.796HisCys: 0.796 ± 0.371
1.592HisAsp: 1.592 ± 0.486
1.592HisGlu: 1.592 ± 0.486
0.0HisPhe: 0.0 ± 0.0
0.0HisGly: 0.0 ± 0.0
0.796HisHis: 0.796 ± 0.371
1.592HisIle: 1.592 ± 0.486
2.389HisLys: 2.389 ± 0.115
1.99HisLeu: 1.99 ± 0.3
1.194HisMet: 1.194 ± 0.556
1.592HisAsn: 1.592 ± 0.742
0.398HisPro: 0.398 ± 0.185
0.398HisGln: 0.398 ± 0.185
0.796HisArg: 0.796 ± 0.371
1.592HisSer: 1.592 ± 0.486
1.592HisThr: 1.592 ± 0.486
1.99HisVal: 1.99 ± 0.927
0.796HisTrp: 0.796 ± 2.085
3.583HisTyr: 3.583 ± 1.669
0.0HisXaa: 0.0 ± 0.0
Ile
4.379IleAla: 4.379 ± 4.098
1.194IleCys: 1.194 ± 0.671
5.971IleAsp: 5.971 ± 2.782
5.971IleGlu: 5.971 ± 1.554
2.389IlePhe: 2.389 ± 1.343
4.379IleGly: 4.379 ± 2.871
1.99IleHis: 1.99 ± 0.927
2.787IleIle: 2.787 ± 1.298
6.369IleLys: 6.369 ± 1.74
5.971IleLeu: 5.971 ± 0.327
3.583IleMet: 3.583 ± 0.442
3.583IleAsn: 3.583 ± 0.786
1.99IlePro: 1.99 ± 0.927
2.389IleGln: 2.389 ± 1.113
3.981IleArg: 3.981 ± 0.601
5.573IleSer: 5.573 ± 0.141
6.768IleThr: 6.768 ± 1.758
2.787IleVal: 2.787 ± 1.298
0.398IleTrp: 0.398 ± 0.185
2.787IleTyr: 2.787 ± 1.298
0.0IleXaa: 0.0 ± 0.0
Lys
5.175LysAla: 5.175 ± 3.727
1.194LysCys: 1.194 ± 0.671
3.981LysAsp: 3.981 ± 0.601
5.573LysGlu: 5.573 ± 2.597
3.583LysPhe: 3.583 ± 1.669
3.185LysGly: 3.185 ± 1.484
3.583LysHis: 3.583 ± 2.014
6.768LysIle: 6.768 ± 2.986
4.777LysLys: 4.777 ± 1.457
6.768LysLeu: 6.768 ± 3.153
1.592LysMet: 1.592 ± 0.742
2.389LysAsn: 2.389 ± 0.115
3.583LysPro: 3.583 ± 1.669
2.389LysGln: 2.389 ± 1.343
3.981LysArg: 3.981 ± 0.627
3.185LysSer: 3.185 ± 1.484
6.768LysThr: 6.768 ± 2.986
5.573LysVal: 5.573 ± 2.597
0.398LysTrp: 0.398 ± 0.185
2.389LysTyr: 2.389 ± 1.113
0.0LysXaa: 0.0 ± 0.0
Leu
5.971LeuAla: 5.971 ± 3.356
1.592LeuCys: 1.592 ± 0.742
6.768LeuAsp: 6.768 ± 0.698
3.185LeuGlu: 3.185 ± 0.256
2.787LeuPhe: 2.787 ± 1.298
3.981LeuGly: 3.981 ± 0.627
1.194LeuHis: 1.194 ± 0.556
5.573LeuIle: 5.573 ± 1.369
3.981LeuLys: 3.981 ± 0.601
4.777LeuLeu: 4.777 ± 0.998
4.379LeuMet: 4.379 ± 2.04
7.962LeuAsn: 7.962 ± 3.657
3.185LeuPro: 3.185 ± 0.256
1.194LeuGln: 1.194 ± 0.556
5.971LeuArg: 5.971 ± 1.554
3.185LeuSer: 3.185 ± 0.256
6.768LeuThr: 6.768 ± 1.758
5.175LeuVal: 5.175 ± 1.272
1.194LeuTrp: 1.194 ± 0.556
1.99LeuTyr: 1.99 ± 0.3
0.0LeuXaa: 0.0 ± 0.0
Met
2.389MetAla: 2.389 ± 2.57
0.0MetCys: 0.0 ± 0.0
2.787MetAsp: 2.787 ± 0.071
2.389MetGlu: 2.389 ± 0.115
0.398MetPhe: 0.398 ± 0.185
1.99MetGly: 1.99 ± 0.927
1.194MetHis: 1.194 ± 0.671
1.592MetIle: 1.592 ± 0.742
1.99MetLys: 1.99 ± 1.528
3.981MetLeu: 3.981 ± 0.627
1.194MetMet: 1.194 ± 0.556
0.796MetAsn: 0.796 ± 0.371
2.787MetPro: 2.787 ± 0.071
1.194MetGln: 1.194 ± 0.556
1.194MetArg: 1.194 ± 0.556
2.787MetSer: 2.787 ± 1.298
2.787MetThr: 2.787 ± 0.071
0.796MetVal: 0.796 ± 0.857
0.398MetTrp: 0.398 ± 1.042
0.398MetTyr: 0.398 ± 0.185
0.0MetXaa: 0.0 ± 0.0
Asn
4.777AsnAla: 4.777 ± 2.685
1.592AsnCys: 1.592 ± 0.486
3.981AsnAsp: 3.981 ± 0.601
2.787AsnGlu: 2.787 ± 1.298
1.592AsnPhe: 1.592 ± 0.742
2.787AsnGly: 2.787 ± 0.071
1.99AsnHis: 1.99 ± 0.927
4.379AsnIle: 4.379 ± 2.04
2.389AsnLys: 2.389 ± 1.113
4.379AsnLeu: 4.379 ± 0.415
1.99AsnMet: 1.99 ± 2.237
5.971AsnAsn: 5.971 ± 1.554
2.389AsnPro: 2.389 ± 0.115
1.194AsnGln: 1.194 ± 0.556
2.787AsnArg: 2.787 ± 1.298
3.185AsnSer: 3.185 ± 0.256
2.389AsnThr: 2.389 ± 0.115
0.796AsnVal: 0.796 ± 0.371
0.398AsnTrp: 0.398 ± 0.185
1.592AsnTyr: 1.592 ± 0.486
0.0AsnXaa: 0.0 ± 0.0
Pro
0.398ProAla: 0.398 ± 1.042
0.398ProCys: 0.398 ± 0.185
2.389ProAsp: 2.389 ± 0.115
2.787ProGlu: 2.787 ± 0.071
1.194ProPhe: 1.194 ± 0.556
1.194ProGly: 1.194 ± 0.556
0.796ProHis: 0.796 ± 0.857
2.787ProIle: 2.787 ± 0.071
3.981ProLys: 3.981 ± 1.855
1.99ProLeu: 1.99 ± 1.528
0.398ProMet: 0.398 ± 0.185
3.185ProAsn: 3.185 ± 0.256
1.194ProPro: 1.194 ± 0.671
0.398ProGln: 0.398 ± 0.185
3.185ProArg: 3.185 ± 1.484
0.796ProSer: 0.796 ± 0.371
3.583ProThr: 3.583 ± 2.014
1.592ProVal: 1.592 ± 0.486
0.0ProTrp: 0.0 ± 0.0
1.99ProTyr: 1.99 ± 0.3
0.0ProXaa: 0.0 ± 0.0
Gln
0.796GlnAla: 0.796 ± 0.857
0.398GlnCys: 0.398 ± 0.185
1.592GlnAsp: 1.592 ± 2.941
2.787GlnGlu: 2.787 ± 1.298
1.194GlnPhe: 1.194 ± 0.671
1.592GlnGly: 1.592 ± 0.486
1.194GlnHis: 1.194 ± 0.671
2.787GlnIle: 2.787 ± 0.071
3.185GlnLys: 3.185 ± 1.484
2.787GlnLeu: 2.787 ± 0.071
0.398GlnMet: 0.398 ± 0.185
1.194GlnAsn: 1.194 ± 0.556
0.398GlnPro: 0.398 ± 0.185
1.99GlnGln: 1.99 ± 0.927
0.796GlnArg: 0.796 ± 0.371
2.389GlnSer: 2.389 ± 0.115
1.194GlnThr: 1.194 ± 0.556
1.194GlnVal: 1.194 ± 0.556
0.0GlnTrp: 0.0 ± 0.0
1.194GlnTyr: 1.194 ± 0.671
0.0GlnXaa: 0.0 ± 0.0
Arg
3.583ArgAla: 3.583 ± 3.242
0.398ArgCys: 0.398 ± 1.042
3.185ArgAsp: 3.185 ± 0.256
1.99ArgGlu: 1.99 ± 0.927
0.796ArgPhe: 0.796 ± 0.371
3.185ArgGly: 3.185 ± 1.484
1.592ArgHis: 1.592 ± 0.742
3.981ArgIle: 3.981 ± 0.627
2.787ArgLys: 2.787 ± 0.071
5.971ArgLeu: 5.971 ± 1.554
1.194ArgMet: 1.194 ± 0.556
1.592ArgAsn: 1.592 ± 0.742
2.787ArgPro: 2.787 ± 0.071
1.99ArgGln: 1.99 ± 1.528
1.194ArgArg: 1.194 ± 0.556
3.981ArgSer: 3.981 ± 0.627
3.583ArgThr: 3.583 ± 0.442
4.379ArgVal: 4.379 ± 0.813
0.796ArgTrp: 0.796 ± 0.371
1.99ArgTyr: 1.99 ± 0.927
0.0ArgXaa: 0.0 ± 0.0
Ser
7.962SerAla: 7.962 ± 1.201
1.194SerCys: 1.194 ± 0.556
3.583SerAsp: 3.583 ± 0.786
1.99SerGlu: 1.99 ± 0.927
2.787SerPhe: 2.787 ± 1.298
1.592SerGly: 1.592 ± 0.486
1.194SerHis: 1.194 ± 0.556
3.583SerIle: 3.583 ± 1.669
5.573SerLys: 5.573 ± 1.369
5.175SerLeu: 5.175 ± 2.5
1.99SerMet: 1.99 ± 0.927
2.389SerAsn: 2.389 ± 0.115
2.389SerPro: 2.389 ± 0.115
1.194SerGln: 1.194 ± 0.556
3.185SerArg: 3.185 ± 0.972
2.787SerSer: 2.787 ± 0.071
4.777SerThr: 4.777 ± 2.226
2.787SerVal: 2.787 ± 0.071
1.194SerTrp: 1.194 ± 0.556
4.379SerTyr: 4.379 ± 0.813
0.0SerXaa: 0.0 ± 0.0
Thr
2.787ThrAla: 2.787 ± 1.157
0.398ThrCys: 0.398 ± 0.185
3.981ThrAsp: 3.981 ± 0.601
7.166ThrGlu: 7.166 ± 0.345
1.99ThrPhe: 1.99 ± 0.3
1.99ThrGly: 1.99 ± 0.3
1.194ThrHis: 1.194 ± 0.671
6.369ThrIle: 6.369 ± 0.512
6.369ThrLys: 6.369 ± 0.512
5.175ThrLeu: 5.175 ± 1.184
2.787ThrMet: 2.787 ± 3.613
1.99ThrAsn: 1.99 ± 0.3
2.787ThrPro: 2.787 ± 1.157
3.981ThrGln: 3.981 ± 0.627
5.573ThrArg: 5.573 ± 0.141
5.573ThrSer: 5.573 ± 0.141
3.583ThrThr: 3.583 ± 0.442
4.777ThrVal: 4.777 ± 3.913
0.0ThrTrp: 0.0 ± 0.0
2.787ThrTyr: 2.787 ± 2.385
0.0ThrXaa: 0.0 ± 0.0
Val
6.768ValAla: 6.768 ± 1.758
1.99ValCys: 1.99 ± 0.3
3.583ValAsp: 3.583 ± 0.786
5.175ValGlu: 5.175 ± 0.044
0.796ValPhe: 0.796 ± 0.371
1.194ValGly: 1.194 ± 0.671
2.787ValHis: 2.787 ± 1.298
5.175ValIle: 5.175 ± 0.044
4.777ValLys: 4.777 ± 0.998
3.185ValLeu: 3.185 ± 0.256
0.398ValMet: 0.398 ± 0.185
2.389ValAsn: 2.389 ± 0.115
2.787ValPro: 2.787 ± 1.157
0.796ValGln: 0.796 ± 0.371
4.379ValArg: 4.379 ± 0.813
3.981ValSer: 3.981 ± 0.601
3.583ValThr: 3.583 ± 0.442
4.379ValVal: 4.379 ± 2.871
1.194ValTrp: 1.194 ± 0.556
1.592ValTyr: 1.592 ± 0.742
0.0ValXaa: 0.0 ± 0.0
Trp
1.592TrpAla: 1.592 ± 0.742
0.398TrpCys: 0.398 ± 0.185
1.592TrpAsp: 1.592 ± 0.742
0.796TrpGlu: 0.796 ± 0.371
0.398TrpPhe: 0.398 ± 0.185
0.796TrpGly: 0.796 ± 0.371
0.398TrpHis: 0.398 ± 1.042
1.194TrpIle: 1.194 ± 0.556
0.0TrpLys: 0.0 ± 0.0
0.796TrpLeu: 0.796 ± 0.857
0.0TrpMet: 0.0 ± 0.0
0.796TrpAsn: 0.796 ± 0.371
0.398TrpPro: 0.398 ± 0.185
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.398TrpSer: 0.398 ± 1.042
0.398TrpThr: 0.398 ± 0.185
0.398TrpVal: 0.398 ± 0.185
0.398TrpTrp: 0.398 ± 0.185
0.398TrpTyr: 0.398 ± 0.185
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.787TyrAla: 2.787 ± 1.298
0.398TyrCys: 0.398 ± 0.185
3.583TyrAsp: 3.583 ± 1.669
2.787TyrGlu: 2.787 ± 1.157
1.592TyrPhe: 1.592 ± 0.742
3.185TyrGly: 3.185 ± 1.484
0.0TyrHis: 0.0 ± 0.0
3.583TyrIle: 3.583 ± 0.442
2.389TyrLys: 2.389 ± 1.343
3.583TyrLeu: 3.583 ± 0.442
1.592TyrMet: 1.592 ± 0.486
3.981TyrAsn: 3.981 ± 0.627
1.194TyrPro: 1.194 ± 0.556
2.389TyrGln: 2.389 ± 1.113
1.194TyrArg: 1.194 ± 0.556
3.185TyrSer: 3.185 ± 0.972
1.99TyrThr: 1.99 ± 0.3
3.185TyrVal: 3.185 ± 0.256
0.796TyrTrp: 0.796 ± 0.371
2.787TyrTyr: 2.787 ± 1.298
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2513 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski