Simian torque teno virus 33

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus; unclassified Alphatorquevirus

Average proteome isoelectric point is 8.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5IMV8|A0A0C5IMV8_9VIRU ORF4 OS=Simian torque teno virus 33 OX=1629656 PE=4 SV=1
MM1 pKa = 7.08YY2 pKa = 9.46FQRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84SVYY11 pKa = 9.06GRR13 pKa = 11.84KK14 pKa = 9.29KK15 pKa = 8.48GHH17 pKa = 6.54HH18 pKa = 6.76PRR20 pKa = 11.84VQPMFWKK27 pKa = 10.71APAEE31 pKa = 4.13DD32 pKa = 3.16EE33 pKa = 4.46GARR36 pKa = 11.84EE37 pKa = 4.11EE38 pKa = 3.92RR39 pKa = 11.84WLRR42 pKa = 11.84SVVDD46 pKa = 3.6GHH48 pKa = 7.36AAFCACRR55 pKa = 11.84YY56 pKa = 8.86PLAHH60 pKa = 7.1LSYY63 pKa = 10.54VHH65 pKa = 6.42GRR67 pKa = 11.84HH68 pKa = 6.25SGAAGQARR76 pKa = 11.84TPPAPRR82 pKa = 11.84FQVASPSPVKK92 pKa = 10.11PRR94 pKa = 11.84PPPPTPASDD103 pKa = 3.6PPSRR107 pKa = 11.84NRR109 pKa = 11.84DD110 pKa = 3.26SGVWCGSEE118 pKa = 4.77DD119 pKa = 4.1SGTRR123 pKa = 11.84DD124 pKa = 3.4AGDD127 pKa = 3.29PAARR131 pKa = 11.84GGVDD135 pKa = 3.95DD136 pKa = 6.59FSAEE140 pKa = 3.99DD141 pKa = 3.81LEE143 pKa = 4.65DD144 pKa = 3.44LFRR147 pKa = 11.84AVEE150 pKa = 3.84EE151 pKa = 4.45DD152 pKa = 3.3AAGG155 pKa = 3.38

Molecular weight: 17.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5IBK6|A0A0C5IBK6_9VIRU ORF3 OS=Simian torque teno virus 33 OX=1629656 PE=4 SV=1
MM1 pKa = 6.71VWLRR5 pKa = 11.84RR6 pKa = 11.84LWYY9 pKa = 7.95TGRR12 pKa = 11.84WRR14 pKa = 11.84PRR16 pKa = 11.84RR17 pKa = 11.84ARR19 pKa = 11.84WRR21 pKa = 11.84GRR23 pKa = 11.84FLRR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84FRR30 pKa = 11.84RR31 pKa = 11.84PLPRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84VRR44 pKa = 11.84RR45 pKa = 11.84WRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84GRR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84YY54 pKa = 8.43ARR56 pKa = 11.84RR57 pKa = 11.84YY58 pKa = 8.75RR59 pKa = 11.84RR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84WGRR65 pKa = 11.84RR66 pKa = 11.84RR67 pKa = 11.84RR68 pKa = 11.84WGRR71 pKa = 11.84GRR73 pKa = 11.84RR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84KK77 pKa = 8.45RR78 pKa = 11.84TLVLTQWNPYY88 pKa = 6.81TVRR91 pKa = 11.84ACSIRR96 pKa = 11.84GWFPIVITGLGRR108 pKa = 11.84MQHH111 pKa = 7.24DD112 pKa = 4.2YY113 pKa = 9.45TAHH116 pKa = 6.4SEE118 pKa = 4.23EE119 pKa = 4.73IPASSLSFGGGFAYY133 pKa = 10.21AKK135 pKa = 10.1LSLRR139 pKa = 11.84FFYY142 pKa = 10.62QEE144 pKa = 4.0YY145 pKa = 9.57QRR147 pKa = 11.84HH148 pKa = 5.66HH149 pKa = 6.1NWWTASNLEE158 pKa = 4.63LDD160 pKa = 4.01LCRR163 pKa = 11.84YY164 pKa = 9.05KK165 pKa = 10.11HH166 pKa = 4.49TTVRR170 pKa = 11.84FYY172 pKa = 11.24RR173 pKa = 11.84DD174 pKa = 3.23TEE176 pKa = 3.52RR177 pKa = 11.84SYY179 pKa = 10.96IVKK182 pKa = 10.46YY183 pKa = 11.04SLDD186 pKa = 3.61TPFTINSLTFMSEE199 pKa = 3.97HH200 pKa = 6.53PVVMMLSRR208 pKa = 11.84HH209 pKa = 5.63HH210 pKa = 6.81RR211 pKa = 11.84LIPSLKK217 pKa = 10.26DD218 pKa = 3.07RR219 pKa = 11.84PFWRR223 pKa = 11.84KK224 pKa = 7.94PWVSLRR230 pKa = 11.84LRR232 pKa = 11.84PPRR235 pKa = 11.84LMLNHH240 pKa = 7.45WYY242 pKa = 10.28FSQDD246 pKa = 2.94FCDD249 pKa = 3.95VGLALIMASPIDD261 pKa = 4.37LTNMWVDD268 pKa = 3.71PNKK271 pKa = 10.49LSPATHH277 pKa = 5.98FQIFDD282 pKa = 3.43LTKK285 pKa = 9.2YY286 pKa = 10.17KK287 pKa = 9.37HH288 pKa = 5.68TFSIASDD295 pKa = 3.17KK296 pKa = 11.02VSEE299 pKa = 4.57RR300 pKa = 11.84EE301 pKa = 4.01NTLKK305 pKa = 9.99TLLSTNKK312 pKa = 9.74NNEE315 pKa = 4.16EE316 pKa = 3.77VCPAGRR322 pKa = 11.84HH323 pKa = 4.07LWTRR327 pKa = 11.84EE328 pKa = 3.98ARR330 pKa = 11.84DD331 pKa = 3.2HH332 pKa = 5.66WNSWRR337 pKa = 11.84KK338 pKa = 10.55DD339 pKa = 3.35NTKK342 pKa = 10.49GFSSGNLCNSQAWKK356 pKa = 10.51HH357 pKa = 5.39SGPYY361 pKa = 8.68EE362 pKa = 3.99TFKK365 pKa = 11.05QLGQQEE371 pKa = 4.62VNDD374 pKa = 3.68NNKK377 pKa = 9.9LYY379 pKa = 10.82KK380 pKa = 10.12SIYY383 pKa = 10.08SGTPGNDD390 pKa = 2.41WTLNNVYY397 pKa = 10.61GMYY400 pKa = 9.55TYY402 pKa = 11.46TMLSQNRR409 pKa = 11.84LDD411 pKa = 4.37SEE413 pKa = 4.27IKK415 pKa = 10.66GPYY418 pKa = 7.21QTIGYY423 pKa = 8.54HH424 pKa = 4.67PHH426 pKa = 6.98IDD428 pKa = 3.78DD429 pKa = 4.98GEE431 pKa = 4.61GNLLFLQPLVKK442 pKa = 10.25GDD444 pKa = 4.03SVFDD448 pKa = 3.78TQRR451 pKa = 11.84SKK453 pKa = 11.21CAIVDD458 pKa = 3.66QPLWLAAWGYY468 pKa = 9.69WDD470 pKa = 3.83YY471 pKa = 11.24CSKK474 pKa = 10.93YY475 pKa = 10.5LYY477 pKa = 9.66PDD479 pKa = 3.16KK480 pKa = 10.71TWFYY484 pKa = 11.5SYY486 pKa = 8.68MICVRR491 pKa = 11.84CPFTYY496 pKa = 10.07PKK498 pKa = 9.25MYY500 pKa = 10.34RR501 pKa = 11.84SGEE504 pKa = 4.06PKK506 pKa = 10.31KK507 pKa = 10.89CDD509 pKa = 3.04VPYY512 pKa = 10.54SYY514 pKa = 11.74NFGQGKK520 pKa = 7.8MPGGIWPPSLDD531 pKa = 4.94FRR533 pKa = 11.84NKK535 pKa = 8.92WYY537 pKa = 10.63LCAYY541 pKa = 8.32HH542 pKa = 6.14QKK544 pKa = 10.17EE545 pKa = 3.95WLEE548 pKa = 4.0NLVSCGPMVPKK559 pKa = 10.42AYY561 pKa = 9.27PHH563 pKa = 6.65KK564 pKa = 10.65SYY566 pKa = 11.14SLTMGYY572 pKa = 9.83KK573 pKa = 10.27SKK575 pKa = 10.2WLWGGNAIYY584 pKa = 9.49TRR586 pKa = 11.84QVQDD590 pKa = 3.13PCSAGRR596 pKa = 11.84HH597 pKa = 5.27EE598 pKa = 6.19LPGPDD603 pKa = 3.33QKK605 pKa = 11.1HH606 pKa = 6.76DD607 pKa = 3.71SVQVVDD613 pKa = 5.2PGTQAPQLIFHH624 pKa = 6.52NWDD627 pKa = 3.13TRR629 pKa = 11.84RR630 pKa = 11.84GGYY633 pKa = 8.48TDD635 pKa = 4.23SSLKK639 pKa = 10.19RR640 pKa = 11.84VRR642 pKa = 11.84DD643 pKa = 3.85YY644 pKa = 11.65EE645 pKa = 4.21PLDD648 pKa = 3.31EE649 pKa = 4.49TLYY652 pKa = 11.04SGAPKK657 pKa = 10.38RR658 pKa = 11.84PRR660 pKa = 11.84NDD662 pKa = 2.64VFRR665 pKa = 11.84VQLSPGRR672 pKa = 11.84AAAAGDD678 pKa = 3.58WTSAAGGSEE687 pKa = 3.48EE688 pKa = 4.99RR689 pKa = 11.84YY690 pKa = 9.9PGTEE694 pKa = 3.56SDD696 pKa = 3.11RR697 pKa = 11.84WTSSEE702 pKa = 3.92EE703 pKa = 3.91EE704 pKa = 4.18EE705 pKa = 4.33EE706 pKa = 4.24EE707 pKa = 4.31EE708 pKa = 4.15EE709 pKa = 4.69GVLGSEE715 pKa = 4.5NQQQRR720 pKa = 11.84PQQQQQLEE728 pKa = 4.21LRR730 pKa = 11.84LRR732 pKa = 11.84DD733 pKa = 3.36RR734 pKa = 11.84LLRR737 pKa = 11.84KK738 pKa = 9.55LRR740 pKa = 11.84EE741 pKa = 3.86QRR743 pKa = 11.84EE744 pKa = 3.88QQAQLKK750 pKa = 10.2AQMQHH755 pKa = 4.18VFSRR759 pKa = 11.84LVRR762 pKa = 11.84AEE764 pKa = 4.32GNLHH768 pKa = 6.97LDD770 pKa = 3.41PRR772 pKa = 11.84LLL774 pKa = 4.37

Molecular weight: 92.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1268

155

774

317.0

36.42

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.625 ± 2.097

1.577 ± 0.211

4.732 ± 0.667

5.047 ± 0.294

3.312 ± 0.747

8.123 ± 1.769

2.445 ± 0.688

2.129 ± 0.487

3.785 ± 0.989

7.334 ± 1.404

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.656 ± 0.358

2.997 ± 0.884

8.202 ± 2.011

4.259 ± 0.748

12.776 ± 1.066

8.438 ± 2.793

5.205 ± 1.047

4.18 ± 0.684

2.997 ± 0.988

4.18 ± 1.199
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski