Bitter gourd leaf curl betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite; Luffa puckering and leaf distortion-associated DNA beta

Average proteome isoelectric point is 5.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q2VU50|Q2VU50_9VIRU Truncated beta C1 OS=Bitter gourd leaf curl betasatellite OX=316106 GN=beta C1 PE=4 SV=1
MM1 pKa = 7.09TRR3 pKa = 11.84SGTNKK8 pKa = 9.62QGVKK12 pKa = 8.4FTVDD16 pKa = 3.1VRR18 pKa = 11.84IMEE21 pKa = 3.99NMKK24 pKa = 10.08IFIHH28 pKa = 6.0IRR30 pKa = 11.84IVSTMSPALIRR41 pKa = 11.84YY42 pKa = 7.63EE43 pKa = 4.69GIVKK47 pKa = 8.09YY48 pKa = 9.04TYY50 pKa = 11.5GDD52 pKa = 3.18MHH54 pKa = 8.1VPFDD58 pKa = 4.19FNGFEE63 pKa = 4.42GNIIANFLFANNGAKK78 pKa = 9.48IEE80 pKa = 4.34EE81 pKa = 4.35IEE83 pKa = 5.08IEE85 pKa = 5.24DD86 pKa = 3.55IVQQ89 pKa = 3.14

Molecular weight: 10.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q2VU50|Q2VU50_9VIRU Truncated beta C1 OS=Bitter gourd leaf curl betasatellite OX=316106 GN=beta C1 PE=4 SV=1
MM1 pKa = 7.09TRR3 pKa = 11.84SGTNKK8 pKa = 9.62QGVKK12 pKa = 8.4FTVDD16 pKa = 3.1VRR18 pKa = 11.84IMEE21 pKa = 3.99NMKK24 pKa = 10.08IFIHH28 pKa = 6.0IRR30 pKa = 11.84IVSTMSPALIRR41 pKa = 11.84YY42 pKa = 7.63EE43 pKa = 4.69GIVKK47 pKa = 8.09YY48 pKa = 9.04TYY50 pKa = 11.5GDD52 pKa = 3.18MHH54 pKa = 8.1VPFDD58 pKa = 4.19FNGFEE63 pKa = 4.42GNIIANFLFANNGAKK78 pKa = 9.48IEE80 pKa = 4.34EE81 pKa = 4.35IEE83 pKa = 5.08IEE85 pKa = 5.24DD86 pKa = 3.55IVQQ89 pKa = 3.14

Molecular weight: 10.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

89

89

89

89.0

10.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.494 ± 0.0

0.0 ± 0.0

4.494 ± 0.0

7.865 ± 0.0

7.865 ± 0.0

7.865 ± 0.0

2.247 ± 0.0

14.607 ± 0.0

5.618 ± 0.0

2.247 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.618 ± 0.0

7.865 ± 0.0

2.247 ± 0.0

2.247 ± 0.0

4.494 ± 0.0

3.371 ± 0.0

5.618 ± 0.0

7.865 ± 0.0

0.0 ± 0.0

3.371 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski