Choristoneura rosaceana entomopoxvirus L

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Entomopoxvirinae; Betaentomopoxvirus; Choristoneura rosaceana entomopoxvirus

Average proteome isoelectric point is 6.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 286 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R4ZDY2|R4ZDY2_9POXV N1R/p28-like protein OS=Choristoneura rosaceana entomopoxvirus 'L' OX=1293539 GN=CHREV_138 PE=4 SV=1
MM1 pKa = 7.67TDD3 pKa = 2.74STTEE7 pKa = 3.4IMEE10 pKa = 4.31FDD12 pKa = 4.12VEE14 pKa = 4.36EE15 pKa = 4.68NDD17 pKa = 3.69DD18 pKa = 4.18KK19 pKa = 11.74YY20 pKa = 11.75VIAIDD25 pKa = 4.18TNIQNDD31 pKa = 3.5NDD33 pKa = 4.12DD34 pKa = 4.53NIMMEE39 pKa = 4.25RR40 pKa = 11.84EE41 pKa = 3.5NVYY44 pKa = 10.85YY45 pKa = 8.5YY46 pKa = 10.52TNHH49 pKa = 5.7EE50 pKa = 4.25NKK52 pKa = 10.14VIII55 pKa = 4.51

Molecular weight: 6.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R4ZEA1|R4ZEA1_9POXV Uncharacterized protein OS=Choristoneura rosaceana entomopoxvirus 'L' OX=1293539 GN=CHREV_250 PE=4 SV=1
MM1 pKa = 7.63NIFGLIVSSLALISSIIVVIFNIFRR26 pKa = 11.84LRR28 pKa = 11.84GLLLTKK34 pKa = 10.66LILYY38 pKa = 8.52VILVGSIIIIIFIFTT53 pKa = 3.6

Molecular weight: 5.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

286

0

286

79222

49

1300

277.0

32.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

1.747 ± 0.077

1.829 ± 0.081

6.542 ± 0.106

5.124 ± 0.125

4.673 ± 0.097

2.296 ± 0.111

1.511 ± 0.047

14.536 ± 0.219

9.977 ± 0.208

8.674 ± 0.129

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.861 ± 0.065

12.874 ± 0.224

2.071 ± 0.08

1.944 ± 0.061

2.422 ± 0.095

5.865 ± 0.114

4.516 ± 0.095

3.321 ± 0.101

0.587 ± 0.044

7.629 ± 0.135
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski