Penicillium subrubescens

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14038 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Q5UHS2|A0A1Q5UHS2_9EURO Uncharacterized protein OS=Penicillium subrubescens OX=1316194 GN=PENSUB_2369 PE=4 SV=1
MM1 pKa = 7.75SYY3 pKa = 11.48NNNSDD8 pKa = 3.29NYY10 pKa = 9.94NGGNRR15 pKa = 11.84GSGYY19 pKa = 10.53DD20 pKa = 3.73DD21 pKa = 3.22NHH23 pKa = 7.5DD24 pKa = 3.95YY25 pKa = 11.46GSNQDD30 pKa = 3.84DD31 pKa = 3.83YY32 pKa = 12.16SRR34 pKa = 11.84GNNSSSEE41 pKa = 4.05RR42 pKa = 11.84NQDD45 pKa = 3.05GGNDD49 pKa = 3.84GFRR52 pKa = 11.84GGNDD56 pKa = 3.02NYY58 pKa = 10.85SGQSSGFGGQGGNDD72 pKa = 2.98NYY74 pKa = 11.41GNQSSGNSGNFGGNQGGSSSGSGLGGLLNQAEE106 pKa = 4.58GFIKK110 pKa = 10.24QASASNNNSGNSNNNNNNNNNNNQQDD136 pKa = 3.42ASVDD140 pKa = 3.5NFVDD144 pKa = 3.74SFVDD148 pKa = 3.56KK149 pKa = 11.1QVDD152 pKa = 3.61QYY154 pKa = 12.05APAGSDD160 pKa = 3.25SFVNEE165 pKa = 4.2GVNNMINNAMNKK177 pKa = 9.64YY178 pKa = 9.92LL179 pKa = 4.09

Molecular weight: 18.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Q5U099|A0A1Q5U099_9EURO Carboxylic ester hydrolase OS=Penicillium subrubescens OX=1316194 GN=PENSUB_6617 PE=3 SV=1
MM1 pKa = 7.29TRR3 pKa = 11.84LKK5 pKa = 10.81GPNARR10 pKa = 11.84TKK12 pKa = 8.29TVKK15 pKa = 9.78TKK17 pKa = 8.07TTTTRR22 pKa = 11.84HH23 pKa = 5.39GPATTTRR30 pKa = 11.84HH31 pKa = 5.4GPATTTRR38 pKa = 11.84HH39 pKa = 5.39APATHH44 pKa = 6.38RR45 pKa = 11.84TTKK48 pKa = 10.26RR49 pKa = 11.84RR50 pKa = 11.84WGRR53 pKa = 11.84TQPQHH58 pKa = 3.89HH59 pKa = 7.42HH60 pKa = 5.69KK61 pKa = 10.61RR62 pKa = 11.84KK63 pKa = 8.35VTMGDD68 pKa = 3.31KK69 pKa = 10.93VSGAMMKK76 pKa = 10.66LKK78 pKa = 9.56GTLTGRR84 pKa = 11.84PGVKK88 pKa = 9.62VRR90 pKa = 11.84SS91 pKa = 3.72

Molecular weight: 10.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14038

0

14038

5856265

49

6037

417.2

46.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.576 ± 0.017

1.232 ± 0.01

5.646 ± 0.016

6.121 ± 0.023

3.772 ± 0.013

6.859 ± 0.019

2.411 ± 0.009

5.052 ± 0.016

4.601 ± 0.018

8.995 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.225 ± 0.009

3.694 ± 0.011

5.969 ± 0.023

4.076 ± 0.016

6.002 ± 0.016

8.286 ± 0.025

5.98 ± 0.018

6.163 ± 0.015

1.517 ± 0.008

2.824 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski