Rasamsonia emersonii CBS 393.64

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Rasamsonia; Rasamsonia emersonii

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9842 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0F4Z3Q1|A0A0F4Z3Q1_TALEM WD repeat protein OS=Rasamsonia emersonii CBS 393.64 OX=1408163 GN=T310_0832 PE=4 SV=1
MM1 pKa = 7.55PGIYY5 pKa = 9.66TLVTLSTLLTSINVLAAPAVPATDD29 pKa = 4.3APAPTPPPKK38 pKa = 10.42LEE40 pKa = 4.07EE41 pKa = 4.1RR42 pKa = 11.84ATTCTFSGSDD52 pKa = 3.63GASSASKK59 pKa = 10.75SKK61 pKa = 9.53TSCSTIVLSDD71 pKa = 3.44VAVPSGTTLDD81 pKa = 3.9LTNLNDD87 pKa = 3.64GTHH90 pKa = 6.34VIFEE94 pKa = 4.49GEE96 pKa = 4.12TTFGYY101 pKa = 10.01EE102 pKa = 3.84EE103 pKa = 4.09WSGPLVSVSGTDD115 pKa = 3.13ITVTAASGATLNGDD129 pKa = 4.09GSRR132 pKa = 11.84WWDD135 pKa = 3.42GEE137 pKa = 3.87GSNGGKK143 pKa = 8.26TKK145 pKa = 10.59PKK147 pKa = 10.16FFYY150 pKa = 10.65AHH152 pKa = 6.24NLKK155 pKa = 10.56LSSISGLYY163 pKa = 8.66IQNSPVQVFSISGSEE178 pKa = 4.32DD179 pKa = 3.04LTLSDD184 pKa = 3.91ITIDD188 pKa = 5.54DD189 pKa = 3.95SAGDD193 pKa = 3.59NAGAANTDD201 pKa = 3.3GFDD204 pKa = 3.34VGEE207 pKa = 4.16SSGIVITGATVYY219 pKa = 10.94NQDD222 pKa = 3.4DD223 pKa = 4.15CLAVNSGTNITFSGGLCSGGHH244 pKa = 5.81GLSIGSVGGRR254 pKa = 11.84SDD256 pKa = 3.49NTVSDD261 pKa = 3.72VTIEE265 pKa = 3.95SSQVKK270 pKa = 10.05NSQNGVRR277 pKa = 11.84IKK279 pKa = 9.73TVYY282 pKa = 10.35DD283 pKa = 3.27ATGSVSGVTYY293 pKa = 10.99KK294 pKa = 10.92DD295 pKa = 3.0ITLSGITDD303 pKa = 3.35YY304 pKa = 11.65GIVVRR309 pKa = 11.84QDD311 pKa = 3.47YY312 pKa = 11.2EE313 pKa = 4.21NGSPTGTPTNGVPISDD329 pKa = 3.64FTLDD333 pKa = 3.63NVQGTVDD340 pKa = 4.09SDD342 pKa = 3.41ATDD345 pKa = 3.17IFILCGAGSCSDD357 pKa = 3.6WTWTDD362 pKa = 3.28VNVTGGKK369 pKa = 10.1VSDD372 pKa = 4.03DD373 pKa = 4.12CEE375 pKa = 4.19NVPSGISCSAA385 pKa = 3.3

Molecular weight: 39.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0F4YHL6|A0A0F4YHL6_TALEM Protein kinase (Fragment) OS=Rasamsonia emersonii CBS 393.64 OX=1408163 GN=T310_8391 PE=4 SV=1
QQ1 pKa = 7.11GLVSRR6 pKa = 11.84LKK8 pKa = 10.62CPRR11 pKa = 11.84PRR13 pKa = 11.84PRR15 pKa = 11.84PRR17 pKa = 11.84LKK19 pKa = 10.39RR20 pKa = 11.84APTRR24 pKa = 11.84LPTRR28 pKa = 11.84HH29 pKa = 5.94SPRR32 pKa = 11.84SRR34 pKa = 11.84MVEE37 pKa = 3.78LPSRR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84LLRR46 pKa = 11.84PRR48 pKa = 11.84ARR50 pKa = 11.84KK51 pKa = 9.64SLGSLSPTKK60 pKa = 10.37RR61 pKa = 11.84KK62 pKa = 9.7LLARR66 pKa = 11.84TGRR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84GRR73 pKa = 11.84LLAAPNLNRR82 pKa = 11.84TATRR86 pKa = 11.84RR87 pKa = 11.84WPAA90 pKa = 2.86

Molecular weight: 10.5 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9842

0

9842

4794008

73

7865

487.1

53.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.564 ± 0.021

1.255 ± 0.009

5.662 ± 0.017

6.324 ± 0.027

3.589 ± 0.016

6.649 ± 0.018

2.365 ± 0.01

4.743 ± 0.016

4.701 ± 0.021

8.92 ± 0.026

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.961 ± 0.008

3.647 ± 0.013

6.28 ± 0.027

4.138 ± 0.019

6.604 ± 0.023

8.557 ± 0.03

5.782 ± 0.016

6.109 ± 0.018

1.403 ± 0.009

2.745 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski