Odonata-associated circular virus-14

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UI10|A0A0B4UI10_9VIRU ATP-dependent helicase Rep OS=Odonata-associated circular virus-14 OX=1592114 PE=3 SV=1
MM1 pKa = 7.19SQSQQSRR8 pKa = 11.84RR9 pKa = 11.84WFITINNYY17 pKa = 8.64TSADD21 pKa = 3.06IDD23 pKa = 3.47ALRR26 pKa = 11.84EE27 pKa = 3.98IEE29 pKa = 4.32CNYY32 pKa = 9.88IVACTEE38 pKa = 3.68IAPTTGTPHH47 pKa = 4.61VHH49 pKa = 6.51ALVIFNTNKK58 pKa = 9.99RR59 pKa = 11.84FFAVKK64 pKa = 10.07RR65 pKa = 11.84LVARR69 pKa = 11.84ADD71 pKa = 3.27IEE73 pKa = 4.41IVKK76 pKa = 8.8GTFNQAYY83 pKa = 10.18DD84 pKa = 3.78YY85 pKa = 8.79VTKK88 pKa = 10.44DD89 pKa = 2.97GRR91 pKa = 11.84IILEE95 pKa = 4.34EE96 pKa = 4.05GDD98 pKa = 3.75KK99 pKa = 11.01PKK101 pKa = 10.69EE102 pKa = 3.91KK103 pKa = 10.82HH104 pKa = 6.0NVEE107 pKa = 4.39CTFKK111 pKa = 11.38AMVQAAKK118 pKa = 10.57DD119 pKa = 3.53GTIDD123 pKa = 4.2KK124 pKa = 9.78EE125 pKa = 4.0CLMYY129 pKa = 10.54CRR131 pKa = 11.84YY132 pKa = 10.27EE133 pKa = 4.01KK134 pKa = 10.64FFSRR138 pKa = 11.84FEE140 pKa = 3.92KK141 pKa = 10.7RR142 pKa = 11.84EE143 pKa = 3.88EE144 pKa = 3.76FCYY147 pKa = 10.77DD148 pKa = 3.72GEE150 pKa = 4.45LSCKK154 pKa = 9.73NAWIYY159 pKa = 10.28GPPGTGKK166 pKa = 9.84SRR168 pKa = 11.84LVRR171 pKa = 11.84EE172 pKa = 4.33YY173 pKa = 11.01ARR175 pKa = 11.84SRR177 pKa = 11.84GYY179 pKa = 10.48RR180 pKa = 11.84IYY182 pKa = 11.04EE183 pKa = 3.94KK184 pKa = 10.77LSNKK188 pKa = 8.26WWDD191 pKa = 3.5NYY193 pKa = 11.11DD194 pKa = 3.52GEE196 pKa = 4.7EE197 pKa = 4.18VVLMEE202 pKa = 5.5DD203 pKa = 4.71LDD205 pKa = 4.22PKK207 pKa = 9.86VCEE210 pKa = 4.11VLIHH214 pKa = 6.91HH215 pKa = 6.87IKK217 pKa = 10.4LWADD221 pKa = 4.12RR222 pKa = 11.84YY223 pKa = 9.79PFRR226 pKa = 11.84AEE228 pKa = 3.72VKK230 pKa = 10.16GGSKK234 pKa = 10.4RR235 pKa = 11.84LLPKK239 pKa = 10.04FQLIVTSHH247 pKa = 6.21YY248 pKa = 11.0SLSEE252 pKa = 4.26CFTGPDD258 pKa = 3.12GSAICRR264 pKa = 11.84RR265 pKa = 11.84FDD267 pKa = 3.25EE268 pKa = 4.56WEE270 pKa = 4.04MNN272 pKa = 3.57

Molecular weight: 31.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UI10|A0A0B4UI10_9VIRU ATP-dependent helicase Rep OS=Odonata-associated circular virus-14 OX=1592114 PE=3 SV=1
MM1 pKa = 7.96PSRR4 pKa = 11.84PTRR7 pKa = 11.84VSRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84SNKK15 pKa = 8.2KK16 pKa = 8.47WSPVLIQEE24 pKa = 4.42SVSYY28 pKa = 10.74SLGGTSVKK36 pKa = 10.36LSSVPLCTNSNNTSLAPTATIIKK59 pKa = 9.65AGNFKK64 pKa = 10.87VVVDD68 pKa = 4.29VNISDD73 pKa = 3.93SFTGSGRR80 pKa = 11.84MYY82 pKa = 11.43VMFVPQGYY90 pKa = 9.67DD91 pKa = 3.02LANATSAFPGQHH103 pKa = 6.78PEE105 pKa = 4.81WIMCWRR111 pKa = 11.84GFEE114 pKa = 4.35PGHH117 pKa = 6.48NGLQAVSMQSKK128 pKa = 10.22LKK130 pKa = 10.68RR131 pKa = 11.84NLNSGDD137 pKa = 3.69QIVLVIVANNLSGVASTVSLTVSCSYY163 pKa = 10.44VCCANYY169 pKa = 10.44NDD171 pKa = 4.62SFFF174 pKa = 5.42

Molecular weight: 18.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

446

174

272

223.0

25.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.054 ± 0.169

3.363 ± 0.27

4.709 ± 1.013

6.054 ± 2.391

4.709 ± 0.379

6.054 ± 0.465

1.794 ± 0.356

5.605 ± 0.874

6.278 ± 1.245

6.278 ± 0.342

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.242 ± 0.349

5.605 ± 1.348

4.036 ± 0.628

2.691 ± 0.418

6.278 ± 0.928

8.744 ± 3.106

5.381 ± 0.202

7.848 ± 1.697

2.018 ± 0.162

4.26 ± 0.766
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski