Bos taurus papillomavirus 11

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E1CGB9|E1CGB9_BPV3 Replication protein E1 OS=Bos taurus papillomavirus 11 OX=714200 GN=E1 PE=3 SV=1
MM1 pKa = 7.64KK2 pKa = 10.31GPNVTLEE9 pKa = 4.6GIAADD14 pKa = 4.43LEE16 pKa = 4.64NAVSPINLNCEE27 pKa = 4.03EE28 pKa = 4.78EE29 pKa = 4.11IDD31 pKa = 3.97TEE33 pKa = 4.47EE34 pKa = 4.48VEE36 pKa = 4.49LPNPFEE42 pKa = 4.17ITATCYY48 pKa = 10.01VCEE51 pKa = 4.78KK52 pKa = 9.96ILRR55 pKa = 11.84LAVVTSNDD63 pKa = 4.67GIHH66 pKa = 6.35QLQQLLFEE74 pKa = 4.88NLSLLCSACSRR85 pKa = 11.84DD86 pKa = 3.58VFCNRR91 pKa = 11.84RR92 pKa = 11.84PVKK95 pKa = 10.6NGPP98 pKa = 3.32

Molecular weight: 10.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E1CGC1|E1CGC1_BPV3 E4 protein OS=Bos taurus papillomavirus 11 OX=714200 GN=E4 PE=4 SV=1
MM1 pKa = 7.71ASLEE5 pKa = 4.03ARR7 pKa = 11.84FDD9 pKa = 3.74AVQEE13 pKa = 4.17SLLQIYY19 pKa = 9.7EE20 pKa = 4.37SEE22 pKa = 4.3SSSLEE27 pKa = 3.43LCYY30 pKa = 10.35QYY32 pKa = 10.46WQLIRR37 pKa = 11.84KK38 pKa = 8.28EE39 pKa = 3.74NALYY43 pKa = 8.26FTARR47 pKa = 11.84QQGKK51 pKa = 7.31TRR53 pKa = 11.84LGLYY57 pKa = 9.26AVPATRR63 pKa = 11.84VSEE66 pKa = 4.33QKK68 pKa = 11.0AKK70 pKa = 10.84DD71 pKa = 3.84AIKK74 pKa = 8.27MTLYY78 pKa = 10.92LEE80 pKa = 4.44SLKK83 pKa = 9.1QTQFATEE90 pKa = 3.87RR91 pKa = 11.84WTLMDD96 pKa = 3.68TSSEE100 pKa = 4.15TFMAPPEE107 pKa = 4.08NTFKK111 pKa = 10.99KK112 pKa = 9.89RR113 pKa = 11.84GQHH116 pKa = 3.64VTVVYY121 pKa = 10.8DD122 pKa = 3.62HH123 pKa = 7.53DD124 pKa = 5.12ANNSMLYY131 pKa = 8.97TLWTEE136 pKa = 4.46LYY138 pKa = 10.78YY139 pKa = 10.93LDD141 pKa = 5.72TSDD144 pKa = 3.58TWHH147 pKa = 6.62KK148 pKa = 6.72TTSSVDD154 pKa = 3.27YY155 pKa = 11.11DD156 pKa = 4.04GIFYY160 pKa = 10.23IDD162 pKa = 3.21IYY164 pKa = 8.95GTKK167 pKa = 9.03IYY169 pKa = 10.3YY170 pKa = 9.94INFQDD175 pKa = 5.02DD176 pKa = 3.2ASLYY180 pKa = 9.77SNSGQWEE187 pKa = 4.07VHH189 pKa = 5.73FEE191 pKa = 4.2NKK193 pKa = 9.46VLSPPVTSSLPVGTSGRR210 pKa = 11.84RR211 pKa = 11.84RR212 pKa = 11.84AQTGDD217 pKa = 2.87HH218 pKa = 6.23AQPGGRR224 pKa = 11.84KK225 pKa = 8.78PSQLAGDD232 pKa = 3.78SRR234 pKa = 11.84RR235 pKa = 11.84RR236 pKa = 11.84SQSQSSSRR244 pKa = 11.84SRR246 pKa = 11.84SRR248 pKa = 11.84SRR250 pKa = 11.84SPTKK254 pKa = 9.9EE255 pKa = 3.55PHH257 pKa = 5.21SGRR260 pKa = 11.84RR261 pKa = 11.84EE262 pKa = 3.79AGIPGQQQGRR272 pKa = 11.84PPGRR276 pKa = 11.84RR277 pKa = 11.84RR278 pKa = 11.84GEE280 pKa = 4.05SPEE283 pKa = 3.53QRR285 pKa = 11.84IFGGPSPPTPGQVGGRR301 pKa = 11.84HH302 pKa = 5.92RR303 pKa = 11.84SPSSKK308 pKa = 8.71PTSRR312 pKa = 11.84LARR315 pKa = 11.84LINEE319 pKa = 4.63AYY321 pKa = 10.02DD322 pKa = 3.8PPVLLLQGPANILKK336 pKa = 9.87CFRR339 pKa = 11.84RR340 pKa = 11.84RR341 pKa = 11.84ATQTHH346 pKa = 5.11GHH348 pKa = 6.74RR349 pKa = 11.84FLCMSTSWTWVCKK362 pKa = 9.63TSPLKK367 pKa = 10.61SGHH370 pKa = 6.3RR371 pKa = 11.84MLIAFTNCDD380 pKa = 3.01QRR382 pKa = 11.84KK383 pKa = 8.76GFLSSVRR390 pKa = 11.84LPKK393 pKa = 10.63GVTFVKK399 pKa = 10.8GSLTAYY405 pKa = 9.19SICYY409 pKa = 9.24

Molecular weight: 46.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2424

98

606

346.3

38.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.817 ± 0.529

2.186 ± 0.531

5.899 ± 0.506

5.941 ± 0.622

4.703 ± 0.5

6.436 ± 0.715

2.269 ± 0.139

5.074 ± 0.585

4.827 ± 0.687

8.787 ± 0.974

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.939 ± 0.356

4.95 ± 0.755

6.477 ± 0.886

4.167 ± 0.458

6.559 ± 0.816

8.045 ± 0.789

5.899 ± 0.632

5.652 ± 0.636

1.526 ± 0.261

2.847 ± 0.377
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski