Hainan oligodon formosanus arterivirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Olifoviridae; Gofosavirinae; Kukrinivirus; Oligodon snake nidovirus 1

Average proteome isoelectric point is 7.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2P1GNC3|A0A2P1GNC3_9NIDO Uncharacterized protein OS=Hainan oligodon formosanus arterivirus OX=2116440 PE=4 SV=1
MM1 pKa = 7.55NPLLLLLPVSLVLANSDD18 pKa = 3.81MYY20 pKa = 10.75TPKK23 pKa = 9.97CVCMATAYY31 pKa = 10.27EE32 pKa = 4.49NDD34 pKa = 4.4LGWFPKK40 pKa = 9.93PDD42 pKa = 4.03SDD44 pKa = 4.79PAACFPISDD53 pKa = 4.15YY54 pKa = 10.25QTMVVWPNGMVKK66 pKa = 10.31CVYY69 pKa = 10.55NKK71 pKa = 10.46LLEE74 pKa = 4.1SHH76 pKa = 7.02INCTMVTFGKK86 pKa = 9.71MGLDD90 pKa = 3.39

Molecular weight: 10.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2P1GNC3|A0A2P1GNC3_9NIDO Uncharacterized protein OS=Hainan oligodon formosanus arterivirus OX=2116440 PE=4 SV=1
MM1 pKa = 7.92GSQCQEE7 pKa = 3.84TPLFTRR13 pKa = 11.84TMNQYY18 pKa = 9.35RR19 pKa = 11.84QQPSRR24 pKa = 11.84RR25 pKa = 11.84GSFAPRR31 pKa = 11.84RR32 pKa = 11.84SNQGRR37 pKa = 11.84SFMGPEE43 pKa = 3.62RR44 pKa = 11.84DD45 pKa = 3.52LNQLLRR51 pKa = 11.84DD52 pKa = 3.75LSFVDD57 pKa = 3.5RR58 pKa = 11.84RR59 pKa = 11.84PVQRR63 pKa = 11.84QRR65 pKa = 11.84NPSVRR70 pKa = 11.84APTNSEE76 pKa = 3.73TDD78 pKa = 3.33LLAAIEE84 pKa = 4.03KK85 pKa = 9.01HH86 pKa = 6.13FNVIAPVVAYY96 pKa = 9.45PEE98 pKa = 4.4GDD100 pKa = 3.22ARR102 pKa = 11.84RR103 pKa = 11.84AMNKK107 pKa = 9.64RR108 pKa = 11.84QLCKK112 pKa = 9.5TAIMLLRR119 pKa = 11.84TYY121 pKa = 10.02FAAAGYY127 pKa = 10.53LEE129 pKa = 5.29DD130 pKa = 5.98KK131 pKa = 10.38GGHH134 pKa = 5.41WEE136 pKa = 3.86AAFLISKK143 pKa = 9.71SDD145 pKa = 3.65KK146 pKa = 9.39PQHH149 pKa = 5.87EE150 pKa = 4.64PAVAAAPSQSSASQQ164 pKa = 2.94

Molecular weight: 18.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4907

90

3821

817.8

90.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.235 ± 0.351

3.301 ± 0.384

4.687 ± 0.549

4.585 ± 0.938

5.299 ± 0.407

6.154 ± 0.69

3.077 ± 0.823

5.951 ± 0.489

5.482 ± 0.939

9.252 ± 0.404

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.895 ± 0.604

4.32 ± 0.636

5.482 ± 0.721

3.566 ± 0.529

4.483 ± 0.593

7.764 ± 0.307

6.949 ± 0.941

6.318 ± 0.455

0.958 ± 0.139

3.24 ± 0.509
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski