Cryptotermes secundus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Kalotermitidae; Cryptotermitinae; C

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 27252 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2J7PQL0|A0A2J7PQL0_9NEOP Uncharacterized protein OS=Cryptotermes secundus OX=105785 GN=B7P43_G05024 PE=3 SV=1
MM1 pKa = 7.11VHH3 pKa = 7.37DD4 pKa = 4.99GAFQFDD10 pKa = 4.52DD11 pKa = 4.14VFQGDD16 pKa = 4.11HH17 pKa = 5.78VVSDD21 pKa = 3.95GAFQFDD27 pKa = 5.0DD28 pKa = 3.91VVQGDD33 pKa = 3.85NVVCDD38 pKa = 3.97GAFQSDD44 pKa = 4.37DD45 pKa = 3.57VTHH48 pKa = 6.71GGVFQFDD55 pKa = 3.92DD56 pKa = 4.05VVHH59 pKa = 6.8GDD61 pKa = 3.63NVVHH65 pKa = 7.59DD66 pKa = 4.44GAFQFDD72 pKa = 4.22DD73 pKa = 3.71VVHH76 pKa = 6.44YY77 pKa = 11.15GEE79 pKa = 4.65VVQGGCVGMTDD90 pKa = 3.64DD91 pKa = 5.11AAVFSDD97 pKa = 4.62GFAEE101 pKa = 3.94NDD103 pKa = 3.78VIVSGTFHH111 pKa = 6.89VKK113 pKa = 7.92TT114 pKa = 4.16

Molecular weight: 12.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2J7QS39|A0A2J7QS39_9NEOP DUF1736 domain-containing protein OS=Cryptotermes secundus OX=105785 GN=B7P43_G09725 PE=4 SV=1
NN1 pKa = 6.95ATTGRR6 pKa = 11.84TNATTEE12 pKa = 4.05RR13 pKa = 11.84TNATTGRR20 pKa = 11.84INATTGRR27 pKa = 11.84TNATTGRR34 pKa = 11.84INATTGRR41 pKa = 11.84TNATTGRR48 pKa = 11.84INATTGRR55 pKa = 11.84TNATTGRR62 pKa = 11.84INATTGRR69 pKa = 11.84TNATTGRR76 pKa = 11.84INATTGRR83 pKa = 11.84TNATTGRR90 pKa = 11.84INATTGRR97 pKa = 11.84TNATTGRR104 pKa = 11.84INATTGRR111 pKa = 11.84TNATTGRR118 pKa = 11.84INATTGRR125 pKa = 11.84TNATTGRR132 pKa = 11.84INATTGRR139 pKa = 11.84TNATTGRR146 pKa = 11.84INATTGRR153 pKa = 11.84TNATTGRR160 pKa = 11.84INATTGRR167 pKa = 11.84TNATTGRR174 pKa = 11.84INATTGRR181 pKa = 11.84TNATTGRR188 pKa = 11.84INATTGRR195 pKa = 11.84TNATTGRR202 pKa = 11.84INATTGRR209 pKa = 11.84TNATTGRR216 pKa = 11.84INATTGRR223 pKa = 11.84TNATTGRR230 pKa = 11.84TNAKK234 pKa = 8.23TDD236 pKa = 3.32RR237 pKa = 11.84SSATTGRR244 pKa = 11.84ATT246 pKa = 3.76

Molecular weight: 24.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17779

9473

27252

13199505

35

9899

484.3

54.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.223 ± 0.013

2.093 ± 0.012

5.331 ± 0.011

6.987 ± 0.022

3.546 ± 0.011

5.9 ± 0.017

2.821 ± 0.008

4.951 ± 0.011

6.154 ± 0.019

9.211 ± 0.018

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.343 ± 0.007

4.348 ± 0.011

5.128 ± 0.018

4.562 ± 0.013

5.611 ± 0.015

8.437 ± 0.02

5.759 ± 0.014

6.609 ± 0.012

1.123 ± 0.005

2.824 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski