Simian torque teno virus 34

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus; Torque teno chlorocebus virus 2

Average proteome isoelectric point is 8.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5IA74|A0A0C5IA74_9VIRU Capsid protein OS=Simian torque teno virus 34 OX=1629657 PE=3 SV=1
MM1 pKa = 7.32SFSRR5 pKa = 11.84PASGEE10 pKa = 3.79EE11 pKa = 3.68PRR13 pKa = 11.84AAEE16 pKa = 4.32SDD18 pKa = 4.04PNQPWAGAGGEE29 pKa = 4.27FTHH32 pKa = 7.37RR33 pKa = 11.84SQGAIRR39 pKa = 11.84AGLAGRR45 pKa = 11.84NGQVSKK51 pKa = 8.83THH53 pKa = 6.53APPQIGHH60 pKa = 6.5RR61 pKa = 11.84EE62 pKa = 4.1DD63 pKa = 3.39YY64 pKa = 11.02QEE66 pKa = 4.51IYY68 pKa = 11.26DD69 pKa = 4.31MEE71 pKa = 6.5ASGQWEE77 pKa = 4.39PPQQSIAEE85 pKa = 4.54RR86 pKa = 11.84EE87 pKa = 4.11DD88 pKa = 2.84DD89 pKa = 3.54WYY91 pKa = 11.42RR92 pKa = 11.84SVWWSHH98 pKa = 6.34LCFCGCGDD106 pKa = 3.76PSFHH110 pKa = 7.21FSLLAHH116 pKa = 7.13RR117 pKa = 11.84NQGPRR122 pKa = 11.84GPPGGPPAPPGGPGPRR138 pKa = 11.84PLGQGPPQNLARR150 pKa = 11.84FLPLPALPPAPEE162 pKa = 4.11RR163 pKa = 11.84QPPRR167 pKa = 11.84PGDD170 pKa = 3.63GDD172 pKa = 3.6GGAAAAVGGPPAEE185 pKa = 4.41AADD188 pKa = 3.91AGWRR192 pKa = 11.84EE193 pKa = 3.67EE194 pKa = 4.99DD195 pKa = 3.47IAEE198 pKa = 4.2ALAGLEE204 pKa = 4.04EE205 pKa = 4.4AEE207 pKa = 4.45RR208 pKa = 11.84GG209 pKa = 3.67

Molecular weight: 22.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5IBL0|A0A0C5IBL0_9VIRU ORF3 OS=Simian torque teno virus 34 OX=1629657 PE=4 SV=1
MM1 pKa = 7.38ARR3 pKa = 11.84RR4 pKa = 11.84RR5 pKa = 11.84YY6 pKa = 9.56RR7 pKa = 11.84RR8 pKa = 11.84GARR11 pKa = 11.84RR12 pKa = 11.84TRR14 pKa = 11.84RR15 pKa = 11.84GRR17 pKa = 11.84KK18 pKa = 7.44RR19 pKa = 11.84VRR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84WVGRR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84TYY34 pKa = 10.16RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84PWVRR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84PRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84LLTLKK54 pKa = 9.77QWQPQTNVRR63 pKa = 11.84LTVRR67 pKa = 11.84GILPFMVFGPKK78 pKa = 8.64RR79 pKa = 11.84TQRR82 pKa = 11.84NYY84 pKa = 11.1TMWQDD89 pKa = 3.29TVPPEE94 pKa = 4.0KK95 pKa = 10.07EE96 pKa = 4.01SYY98 pKa = 9.9GGSFATYY105 pKa = 8.79RR106 pKa = 11.84FSMQTLYY113 pKa = 11.13DD114 pKa = 3.18EE115 pKa = 4.61YY116 pKa = 10.91MRR118 pKa = 11.84LRR120 pKa = 11.84NWWSRR125 pKa = 11.84SNTHH129 pKa = 6.78LDD131 pKa = 3.25LVRR134 pKa = 11.84YY135 pKa = 7.42TGVSFRR141 pKa = 11.84LYY143 pKa = 9.77RR144 pKa = 11.84HH145 pKa = 5.09THH147 pKa = 5.66RR148 pKa = 11.84DD149 pKa = 3.59YY150 pKa = 10.67IVSYY154 pKa = 10.62SLEE157 pKa = 4.18TPMEE161 pKa = 4.17SSIATHH167 pKa = 6.09MSLHH171 pKa = 6.87PMRR174 pKa = 11.84QLFQSKK180 pKa = 9.58HH181 pKa = 3.68RR182 pKa = 11.84TVPSFYY188 pKa = 9.32TKK190 pKa = 10.39PGGKK194 pKa = 9.35PYY196 pKa = 8.97ITLKK200 pKa = 10.6ARR202 pKa = 11.84PPRR205 pKa = 11.84LMKK208 pKa = 8.46TQWYY212 pKa = 7.71FQHH215 pKa = 7.09DD216 pKa = 4.17FCNVGLILLRR226 pKa = 11.84AACCNLTNPWMAPSAPTPCLTIYY249 pKa = 10.63AISNGSHH256 pKa = 5.03EE257 pKa = 4.69HH258 pKa = 6.32LSINADD264 pKa = 3.64DD265 pKa = 3.47THH267 pKa = 6.57KK268 pKa = 10.66QYY270 pKa = 10.44RR271 pKa = 11.84QHH273 pKa = 6.41MLQKK277 pKa = 10.59LYY279 pKa = 11.22NNPQHH284 pKa = 7.04LYY286 pKa = 8.17NNHH289 pKa = 5.71FRR291 pKa = 11.84RR292 pKa = 11.84HH293 pKa = 4.24WSKK296 pKa = 10.95VAPKK300 pKa = 10.59KK301 pKa = 10.6NGNQQTEE308 pKa = 4.1PFTWEE313 pKa = 3.86KK314 pKa = 10.7VLKK317 pKa = 10.25NDD319 pKa = 5.32TIQTIQKK326 pKa = 10.13NIYY329 pKa = 7.27QEE331 pKa = 4.16RR332 pKa = 11.84LKK334 pKa = 9.81EE335 pKa = 4.24TQEE338 pKa = 4.04VSTKK342 pKa = 9.8RR343 pKa = 11.84QQAGFRR349 pKa = 11.84GNHH352 pKa = 5.81NEE354 pKa = 4.6DD355 pKa = 3.06EE356 pKa = 4.58TFNYY360 pKa = 8.79TWGLYY365 pKa = 10.49SSILLNTEE373 pKa = 3.59PGFPEE378 pKa = 4.67LSVPYY383 pKa = 10.38SKK385 pKa = 10.75VRR387 pKa = 11.84YY388 pKa = 9.53NPIADD393 pKa = 3.85RR394 pKa = 11.84GSGNAIWIEE403 pKa = 4.01TLTKK407 pKa = 10.49DD408 pKa = 3.09NCHH411 pKa = 6.57FSSQYY416 pKa = 10.09EE417 pKa = 4.27CLIKK421 pKa = 10.55DD422 pKa = 3.57APLWLCLYY430 pKa = 10.59GYY432 pKa = 10.75LDD434 pKa = 3.33WCTKK438 pKa = 9.62YY439 pKa = 10.94KK440 pKa = 10.68NNKK443 pKa = 7.8EE444 pKa = 3.86VYY446 pKa = 8.44LNYY449 pKa = 10.05RR450 pKa = 11.84VGIRR454 pKa = 11.84CPYY457 pKa = 8.97TVPQLYY463 pKa = 10.52SHH465 pKa = 7.11DD466 pKa = 4.24TPTKK470 pKa = 9.0GWIPLSTNFMNGKK483 pKa = 8.46MPGGSTTIPLRR494 pKa = 11.84LQNNWYY500 pKa = 9.61PMIYY504 pKa = 9.31HH505 pKa = 5.24QEE507 pKa = 3.79EE508 pKa = 4.39MIEE511 pKa = 4.16EE512 pKa = 4.36LVASGPFAPRR522 pKa = 11.84DD523 pKa = 3.57HH524 pKa = 6.85GPVVTSSDD532 pKa = 2.66ITIGYY537 pKa = 9.68KK538 pKa = 10.03FGFRR542 pKa = 11.84LGGNYY547 pKa = 9.24IAPKK551 pKa = 10.2QVGDD555 pKa = 3.59PCKK558 pKa = 10.49QPVHH562 pKa = 6.38EE563 pKa = 5.1LPAPGGGDD571 pKa = 3.49YY572 pKa = 10.89LRR574 pKa = 11.84EE575 pKa = 4.11VQVTDD580 pKa = 3.56PTRR583 pKa = 11.84VGPHH587 pKa = 5.11YY588 pKa = 10.23QFHH591 pKa = 6.63PWDD594 pKa = 3.49LRR596 pKa = 11.84RR597 pKa = 11.84GLFSEE602 pKa = 4.68KK603 pKa = 9.53SLKK606 pKa = 9.91RR607 pKa = 11.84VRR609 pKa = 11.84EE610 pKa = 4.14DD611 pKa = 3.05SDD613 pKa = 3.65IEE615 pKa = 4.12TDD617 pKa = 2.74VWRR620 pKa = 11.84PSKK623 pKa = 10.18YY624 pKa = 10.61AKK626 pKa = 9.62PDD628 pKa = 3.42PPAEE632 pKa = 4.1GRR634 pKa = 11.84GLAEE638 pKa = 4.27LCSSVLRR645 pKa = 11.84DD646 pKa = 3.72LLQEE650 pKa = 4.34TQHH653 pKa = 5.82SQSPFSQAHH662 pKa = 6.1PKK664 pKa = 9.03TPEE667 pKa = 3.64EE668 pKa = 4.39TPTVDD673 pKa = 3.22LQRR676 pKa = 11.84LQRR679 pKa = 11.84EE680 pKa = 4.08IRR682 pKa = 11.84QQQQQQSNLQKK693 pKa = 10.68GIKK696 pKa = 9.89NLVLEE701 pKa = 4.18MVKK704 pKa = 9.81YY705 pKa = 10.03QRR707 pKa = 11.84HH708 pKa = 6.03LGVDD712 pKa = 3.2PCLRR716 pKa = 3.96

Molecular weight: 84.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1232

146

716

308.0

35.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.006 ± 2.543

1.542 ± 0.19

4.058 ± 0.309

5.438 ± 0.85

2.922 ± 0.354

6.656 ± 2.086

3.003 ± 0.432

3.084 ± 0.684

4.302 ± 1.162

7.386 ± 0.856

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.786 ± 0.369

3.815 ± 0.931

9.821 ± 2.462

5.844 ± 0.256

10.227 ± 0.744

7.63 ± 2.315

6.331 ± 1.48

3.896 ± 0.855

2.273 ± 0.462

3.977 ± 1.193
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski